On Tue, Oct 09, 2012 at 06:58:11AM -0700, Andrew Mathas wrote:
> Your two patches:
> * trac_10963-more_functorial_constructions-nt.patch
> * trac_12895-subcategory-methods-nt.patch
> both seem to break the 5.3 queue. I haven't checked 5.4-rc1.
Are you sure? I haven't changed those in a while, and the patches
apply smoothly for me.
Hi Nicolas,
I just updated again and checked and I'm still finding that these patches
are breaking sage. All patches in the 5.3 and 5.4.rc1 queues *apply*cleanly,
however, for me sage won't run after these patches are applied.
Specifically, if I move the queue to
trac_12895-subcategory-methods-nt.patch then sage will not compile. See
below for what happens under 5.4.rc1 with "sage -br". Sage does compile
correctly before this patch, so #12895 appears to be causing the problem.
Last night, working from the bottom of the queue up, I found that the
problems started with the patch
trac_10963-more_functorial_constructions-nt.patch. Much the same thing
happens with 5.3. If I try guarding these two patches then
trac_8678-module_morphisms-nt.patch won't apply, and after this many more
of your patches don't apply either, so guarding does not really fix the
problem.
Since no one else has said anything perhaps it is just me but I don't think
that I have done anything usual here...
Cheers,
Andrew
--
MacAndrew-518-(sage-5.4.rc1)-combinat: qpush
applying trac_12895-subcategory-methods-nt.patch
patching file sage/categories/realizations.py
Hunk #3 succeeded at 173 with fuzz 1 (offset -38 lines).
now at: trac_12895-subcategory-methods-nt.patch
MacAndrew-519-(sage-5.4.rc1)-combinat: sage -br
----------------------------------------------------------
sage: Building and installing modified Sage library files.
Installing c_lib
/usr/local/src/sage/sage-5.4.rc1/devel/sage/c_lib
scons: `install' is up to date.
Updating Cython code....
Building modified file sage/categories/category_singleton.pyx.
Building modified file sage/misc/c3.pyx.
Executing 2 commands (using 1 thread)
python `which cython` --old-style-globals --embed-positions --directive
cdivision=True,autotestdict=False,fast_getattr=True
-I/usr/local/src/sage/sage-5.4.rc1/devel/sage-combinat -o
sage/categories/category_singleton.c sage/categories/category_singleton.pyx
sage/categories/category_singleton.pyx -->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages//sage/categories/category_singleton.pyx
python `which cython` --old-style-globals --embed-positions --directive
cdivision=True,autotestdict=False,fast_getattr=True
-I/usr/local/src/sage/sage-5.4.rc1/devel/sage-combinat -o sage/misc/c3.c
sage/misc/c3.pyx
sage/misc/c3.pyx -->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages//sage/misc/c3.pyx
Time to execute 2 commands: 0.786401033401 seconds
Finished compiling Cython code (time = 1.22077488899 seconds)
running install
running build
running build_py
copying sage/categories/algebra_functor.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/bimodules.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/category.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/category_types.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/covariant_functorial_construction.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/finite_fields.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
copying sage/categories/realizations.py ->
build/lib.macosx-10.7-x86_64-2.7/sage/categories
running build_ext
building 'sage.categories.category_singleton' extension
building 'sage.misc.c3' extension
Executing 2 commands (using 1 thread)
gcc -fno-strict-aliasing -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall
-Wstrict-prototypes -I/usr/local/src/sage/sage-5.4.rc1/local/include
-I/usr/local/src/sage/sage-5.4.rc1/local/include/csage
-I/usr/local/src/sage/sage-5.4.rc1/devel/sage/sage/ext
-I/usr/local/src/sage/sage-5.4.rc1/local/include/python2.7 -c
sage/categories/category_singleton.c -o
build/temp.macosx-10.7-x86_64-2.7/sage/categories/category_singleton.o -w
gcc -bundle -undefined dynamic_lookup
-L/usr/local/src/sage/sage-5.4.rc1/local/lib
build/temp.macosx-10.7-x86_64-2.7/sage/categories/category_singleton.o
-L/usr/local/src/sage/sage-5.4.rc1/local/lib -lcsage -lstdc++ -lntl -o
build/lib.macosx-10.7-x86_64-2.7/sage/categories/category_singleton.so
gcc -fno-strict-aliasing -fwrapv -DNDEBUG -g -fwrapv -O3 -Wall
-Wstrict-prototypes -I/usr/local/src/sage/sage-5.4.rc1/local/include
-I/usr/local/src/sage/sage-5.4.rc1/local/include/csage
-I/usr/local/src/sage/sage-5.4.rc1/devel/sage/sage/ext
-I/usr/local/src/sage/sage-5.4.rc1/local/include/python2.7 -c
sage/misc/c3.c -o build/temp.macosx-10.7-x86_64-2.7/sage/misc/c3.o -w
gcc -bundle -undefined dynamic_lookup
-L/usr/local/src/sage/sage-5.4.rc1/local/lib
build/temp.macosx-10.7-x86_64-2.7/sage/misc/c3.o
-L/usr/local/src/sage/sage-5.4.rc1/local/lib -lcsage -lstdc++ -lntl -o
build/lib.macosx-10.7-x86_64-2.7/sage/misc/c3.so
Time to execute 2 commands: 1.40112900734 seconds
Total time spent compiling C/C++ extensions: 1.45703911781 seconds.
running install_lib
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/algebra_functor.py
->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/bimodules.py ->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/category.py ->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying
build/lib.macosx-10.7-x86_64-2.7/sage/categories/category_singleton.so ->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/category_types.py
->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying
build/lib.macosx-10.7-x86_64-2.7/sage/categories/covariant_functorial_construction.py
->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/finite_fields.py
->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/categories/realizations.py ->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories
copying build/lib.macosx-10.7-x86_64-2.7/sage/misc/c3.so ->
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/algebra_functor.py
to algebra_functor.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/bimodules.py
to bimodules.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.py
to category.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category_types.py
to category_types.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/covariant_functorial_construction.py
to covariant_functorial_construction.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/finite_fields.py
to finite_fields.pyc
byte-compiling
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/realizations.py
to realizations.pyc
running install_egg_info
Removing
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage-0.0.0-py2.7.egg-info
Writing
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage-0.0.0-py2.7.egg-info
----------------------------------------------------------------------
| Sage Version 5.4.rc1, Release Date: 2012-10-05 |
| Type "notebook()" for the browser-based notebook interface. |
| Type "help()" for help. |
----------------------------------------------------------------------
**********************************************************************
* *
* Warning: this is a prerelease version, and it may be unstable. *
* *
**********************************************************************
ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (507, 0))
ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (684, 0))
ERROR: An unexpected error occurred while tokenizing input
The following traceback may be corrupted or invalid
The error message is: ('EOF in multi-line statement', (507, 0))
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/IPython/ipmaker.pyc
in force_import(modname, force_reload)
61 reload(sys.modules[modname])
62 else:
---> 63 __import__(modname)
64
65
/usr/local/src/sage/sage-5.4.rc1/local/bin/ipy_profile_sage.py in <module>()
5 preparser(True)
6
----> 7 import sage.all_cmdline
8 sage.all_cmdline._init_cmdline(globals())
9
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/all_cmdline.py
in <module>()
12 try:
13
---> 14 from sage.all import *
15 from sage.calculus.predefined import x
16 preparser(on=True)
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/all.py
in <module>()
64 from time import sleep
65
---> 66 from sage.misc.all import * # takes a while
67
68 from sage.misc.sh import sh
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/all.py
in <module>()
79 from func_persist import func_persist
80
---> 81 from functional import (additive_order,
82 sqrt as numerical_sqrt,
83 base_ring,
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/functional.py
in <module>()
30
31 import sage.misc.latex
---> 32 import sage.interfaces.expect
33 import sage.interfaces.mathematica
34
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/interfaces/expect.py
in <module>()
59 import pexpect
60 from pexpect import ExceptionPexpect
---> 61 from sage.interfaces.interface import Interface, InterfaceElement,
InterfaceFunction, InterfaceFunctionElement, AsciiArtString
62
63 from sage.structure.sage_object import SageObject
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/interfaces/interface.py
in <module>()
40
41 from sage.structure.sage_object import SageObject
---> 42 from sage.structure.parent_base import ParentWithBase
43 from sage.structure.element import RingElement
44
/usr/local/src/sage/sage-5.4.rc1/devel/sage-combinat/sage/combinat/parent_base.pyx
in init sage.structure.parent_base (sage/structure/parent_base.c:1882)()
----> 1
2
3
4
5
/usr/local/src/sage/sage-5.4.rc1/devel/sage-combinat/sage/combinat/parent_old.pyx
in init sage.structure.parent_old (sage/structure/parent_old.c:7628)()
----> 1
2
3
4
5
/usr/local/src/sage/sage-5.4.rc1/devel/sage-combinat/sage/combinat/parent.pyx
in init sage.structure.parent (sage/structure/parent.c:23637)()
189
190
--> 191
192
193
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/classcall_metaclass.so
in sage.misc.classcall_metaclass.ClasscallMetaclass.__call__
(sage/misc/classcall_metaclass.c:946)()
277
278
--> 279
280
281
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category_singleton.so
in sage.categories.category_singleton.Category_singleton.__classcall__
(sage/categories/category_singleton.c:1616)()
309
310
--> 311
312
313
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.pyc
in __classcall__(cls, *args, **options)
447 if isinstance(cls, DynamicMetaclass):
448 cls = cls.__base__
--> 449 return super(Category, cls).__classcall__(cls, *args,
**options)
450
451 def __init__(self, s=None):
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/cachefunc.so
in sage.misc.cachefunc.WeakCachedFunction.__call__
(sage/misc/cachefunc.c:5099)()
913
914
--> 915
916
917
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/structure/unique_representation.pyc
in __classcall__(cls, *args, **options)
464 True
465 """
--> 466 instance = typecall(cls, *args, **options)
467 assert isinstance( instance, cls )
468 if instance.__class__.__reduce__ ==
UniqueRepresentation.__reduce__:
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/classcall_metaclass.so
in sage.misc.classcall_metaclass.typecall
(sage/misc/classcall_metaclass.c:1305)()
465
466
--> 467
468
469
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.pyc
in __init__(self, s)
479 raise TypeError, "Argument string must be a string."
480 self.__class__ =
dynamic_class("%s_with_category"%self.__class__.__name__,
--> 481 (self.__class__,
self.subcategory_class, ),
482 cache = False, reduction =
None,
483 doccls=self.__class__)
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/lazy_attribute.pyc
in __get__(self, a, cls)
533 except KeyError:
534 pass
--> 535 result = self.f(a)
536 if result is NotImplemented:
537 # Workaround: we make sure that cls is the class
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.pyc
in subcategory_class(self)
1213 """
1214 return self._make_named_class('subcategory_class',
'SubcategoryMethods',
-> 1215 cache=False, picklable=False)
1216
1217 @lazy_attribute
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.pyc
in _make_named_class(self, name, method_provider, cache, picklable)
1164 # and point the documentation to it
1165 doccls = method_provider_cls
-> 1166 self._super_categories
1167 if picklable:
1168 reduction = (getattr, (self, name))
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/lazy_attribute.pyc
in __get__(self, a, cls)
533 except KeyError:
534 pass
--> 535 result = self.f(a)
536 if result is NotImplemented:
537 # Workaround: we make sure that cls is the class
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category.pyc
in _super_categories(self)
1006 [Category of rngs, Category of semirings]
1007 """
-> 1008 return self.super_categories()
1009
1010 def _test_category_graph(self, **options):
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/sets_cat.pyc
in super_categories(self)
170 [Category of sets with partial maps]
171 """
--> 172 return [SetsWithPartialMaps()]
173
174 def _call_(self, X, enumerated_set_if_possible = False):
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/misc/classcall_metaclass.so
in sage.misc.classcall_metaclass.ClasscallMetaclass.__call__
(sage/misc/classcall_metaclass.c:946)()
277
278
--> 279
280
281
/usr/local/src/sage/sage-5.4.rc1/local/lib/python2.7/site-packages/sage/categories/category_singleton.so
in sage.categories.category_singleton.Category_singleton.__classcall__
(sage/categories/category_singleton.c:1640)()
311
312
--> 313
314
315
AttributeError: type object 'SetsWithPartialMaps' has no attribute
'_set_classcall'
Error importing ipy_profile_sage - perhaps you should run %upgrade?
WARNING: Loading of ipy_profile_sage failed.
sage:
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