On Wed, 13 Nov 2019, 15:26 Mike Zabrocki, <mike.zabro...@gmail.com> wrote:
> Hmmm. This is better because matplotlib is compiling, but R is not
> compiling because of an old version of bzip2.
>
> I'm trying:
> ./configure --without-system-bzip2
>
you must also keep
--without-system-zlib
in ./configure options, otherwise the zlib issue will pop up again
> and then make.
>
> -Mike
>
> On Tuesday, 12 November 2019 22:35:57 UTC-5, Mike Zabrocki wrote:
>>
>> Hi Dima,
>>
>> It didn't fix the problem, but that may be because it didn't start with a
>> clean build. I'll let it run overnight and let you know what I get
>> tomorrow.
>>
>> -Mike
>>
>> On Tuesday, 12 November 2019 14:04:03 UTC-5, Dima Pasechnik wrote:
>>
>> I believe that running
>>
>> ./configure --without-system-zlib
>>
>> followed by
>>
>> make
>>
>> should allow all these errors to go away. Please try this.
>>
>> On Tue, Nov 12, 2019 at 6:51 PM Mike Zabrocki <mike.z...@gmail.com>
>> wrote:
>> >
>> > Clearly I missed the typo. Here is the output of the 4 commands that
>> are failing now (but this is after the "./configure --without-system-zlib")
>> > and I am attaching the 4 log files and the config.log file.
>> >
>> > [zabrocki@algebra sage-8.9]$ make freetype-clean
>> >
>> > make build/make/Makefile --stop
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9'
>> >
>> > make[1]: `build/make/Makefile' is up to date.
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9'
>> >
>> > build/bin/sage-logger \
>> >
>> > "cd build/make && ./install 'freetype-clean'" logs/install.log
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***
>> >
>> > }
>> >
>> > BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*`
>> >
>> > _=/bin/env
>> >
>> > CONFIGURED_CC=gcc
>> >
>> > CONFIGURED_CXX=g++
>> >
>> > CONFIGURED_FC=gfortran
>> >
>> > CONFIGURED_OBJC=gcc
>> >
>> > CONFIGURED_OBJCXX=g++
>> >
>> > CVS_RSH=ssh
>> >
>> > G_BROKEN_FILENAMES=1
>> >
>> > HISTCONTROL=ignoredups
>> >
>> > HISTSIZE=1000
>> >
>> > HOME=/home/zabrocki
>> >
>> > HOSTNAME=algebra.math.yorku.ca
>> >
>> > LANG=en_US.UTF-8
>> >
>> > LESSOPEN=||/usr/bin/lesspipe.sh %s
>> >
>> > LOADEDMODULES=
>> >
>> > LOGNAME=zabrocki
>> >
>> >
>> LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lz=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.bz=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.rar=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
>>
>> >
>> > MAIL=/var/spool/mail/zabrocki
>> >
>> > MAKEFLAGS= V=1
>> >
>> > MAKELEVEL=1
>> >
>> > MAKE=make
>> >
>> > MFLAGS=
>> >
>> > MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles
>> >
>> > MODULESHOME=/usr/share/Modules
>> >
>> >
>> PATH=/usr/local/sage-8.9/build/bin:/usr/local/sage-8.9/src/bin:/usr/local/sage-8.9/local/bin:.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > PG_ROOT=/opt/webwork/pg
>> >
>> > PWD=/usr/local/sage-8.9/build/make
>> >
>> > PYTHONPATH=/usr/local/sage-8.9/local
>> >
>> > QTDIR=/usr/lib64/qt-3.3
>> >
>> > QTINC=/usr/lib64/qt-3.3/include
>> >
>> > QTLIB=/usr/lib64/qt-3.3/lib
>> >
>> > SAGE_ARB_LIBRARY=arb
>> >
>> > SAGE_BROWSER=firefox
>> >
>> > SAGE_CONFIGURE_FLINT=--with-flint=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_GMP=--with-gmp=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPC=--with-mpc=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPFR=--with-mpfr=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_NTL=--with-ntl=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_PARI=--with-pari=/usr/local/sage-8.9/local
>> >
>> > SAGE_CRTI_DIR=/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64
>> >
>> > SAGE_EXTCODE=/usr/local/sage-8.9/local/share/sage/ext
>> >
>> > SAGE_FLINT_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_FREETYPE_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_GMP_INCLUDE=/usr/local/sage-8.9/local/include
>> >
>> > SAGE_GMP_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOCAL=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOGS=/usr/local/sage-8.9/logs/pkgs
>> >
>> > SAGE_MPC_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_MPFR_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_NTL_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_ORIG_PATH_SET=True
>> >
>> >
>> SAGE_ORIG_PATH=.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > SAGE_PARI_CFG=/usr/local/sage-8.9/local/lib/pari/pari.cfg
>> >
>> > SAGE_PARI_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_PKG_CONFIG_PATH=
>> >
>> > SAGE_PYTHON_VERSION=2
>> >
>> > SAGE_ROOT=/usr/local/sage-8.9
>> >
>> > SAGE_SHARE=/usr/local/sage-8.9/local/share
>> >
>> > SAGE_SPKG_INST=/usr/local/sage-8.9/local/var/lib/sage/installed
>> >
>> > SAGE_SRC=/usr/local/sage-8.9/src
>> >
>> > SAGE_VERSION=8.9
>> >
>> > SELINUX_LEVEL_REQUESTED=
>> >
>> > SELINUX_ROLE_REQUESTED=
>> >
>> > SELINUX_USE_CURRENT_RANGE=
>> >
>> > SHELL=/bin/bash
>> >
>> > SHLVL=4
>> >
>> > SSH_CLIENT=130.63.254.6 61734 2029
>> >
>> > SSH_CONNECTION=130.63.254.6 61734 130.63.76.137 2029
>> >
>> > SSH_TTY=/dev/pts/0
>> >
>> > TERM=xterm-256color
>> >
>> > USER=zabrocki
>> >
>> > WEBWORK_ROOT=/opt/webwork/webwork2
>> >
>> > ***********************************************
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > sage-spkg-uninstall freetype '/usr/local/sage-8.9/local'
>> >
>> > Uninstalling existing 'freetype'
>> >
>> > Removing stamp file
>> '/usr/local/sage-8.9/local/var/lib/sage/installed/freetype-2.9.1'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> >
>> > real 0m0.095s
>> >
>> > user 0m0.073s
>> >
>> > sys 0m0.020s
>> >
>> > Sage build/upgrade complete!
>> >
>> > [zabrocki@algebra sage-8.9]$ make pkgconf-clean
>> >
>> > make build/make/Makefile --stop
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9'
>> >
>> > make[1]: `build/make/Makefile' is up to date.
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9'
>> >
>> > build/bin/sage-logger \
>> >
>> > "cd build/make && ./install 'pkgconf-clean'" logs/install.log
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***
>> >
>> > }
>> >
>> > BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*`
>> >
>> > _=/bin/env
>> >
>> > CONFIGURED_CC=gcc
>> >
>> > CONFIGURED_CXX=g++
>> >
>> > CONFIGURED_FC=gfortran
>> >
>> > CONFIGURED_OBJC=gcc
>> >
>> > CONFIGURED_OBJCXX=g++
>> >
>> > CVS_RSH=ssh
>> >
>> > G_BROKEN_FILENAMES=1
>> >
>> > HISTCONTROL=ignoredups
>> >
>> > HISTSIZE=1000
>> >
>> > HOME=/home/zabrocki
>> >
>> > HOSTNAME=algebra.math.yorku.ca
>> >
>> > LANG=en_US.UTF-8
>> >
>> > LESSOPEN=||/usr/bin/lesspipe.sh %s
>> >
>> > LOADEDMODULES=
>> >
>> > LOGNAME=zabrocki
>> >
>> >
>> LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lz=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.bz=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.rar=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
>>
>> >
>> > MAIL=/var/spool/mail/zabrocki
>> >
>> > MAKEFLAGS= V=1
>> >
>> > MAKELEVEL=1
>> >
>> > MAKE=make
>> >
>> > MFLAGS=
>> >
>> > MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles
>> >
>> > MODULESHOME=/usr/share/Modules
>> >
>> >
>> PATH=/usr/local/sage-8.9/build/bin:/usr/local/sage-8.9/src/bin:/usr/local/sage-8.9/local/bin:.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > PG_ROOT=/opt/webwork/pg
>> >
>> > PWD=/usr/local/sage-8.9/build/make
>> >
>> > PYTHONPATH=/usr/local/sage-8.9/local
>> >
>> > QTDIR=/usr/lib64/qt-3.3
>> >
>> > QTINC=/usr/lib64/qt-3.3/include
>> >
>> > QTLIB=/usr/lib64/qt-3.3/lib
>> >
>> > SAGE_ARB_LIBRARY=arb
>> >
>> > SAGE_BROWSER=firefox
>> >
>> > SAGE_CONFIGURE_FLINT=--with-flint=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_GMP=--with-gmp=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPC=--with-mpc=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPFR=--with-mpfr=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_NTL=--with-ntl=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_PARI=--with-pari=/usr/local/sage-8.9/local
>> >
>> > SAGE_CRTI_DIR=/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64
>> >
>> > SAGE_EXTCODE=/usr/local/sage-8.9/local/share/sage/ext
>> >
>> > SAGE_FLINT_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_FREETYPE_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_GMP_INCLUDE=/usr/local/sage-8.9/local/include
>> >
>> > SAGE_GMP_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOCAL=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOGS=/usr/local/sage-8.9/logs/pkgs
>> >
>> > SAGE_MPC_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_MPFR_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_NTL_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_ORIG_PATH_SET=True
>> >
>> >
>> SAGE_ORIG_PATH=.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > SAGE_PARI_CFG=/usr/local/sage-8.9/local/lib/pari/pari.cfg
>> >
>> > SAGE_PARI_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_PKG_CONFIG_PATH=
>> >
>> > SAGE_PYTHON_VERSION=2
>> >
>> > SAGE_ROOT=/usr/local/sage-8.9
>> >
>> > SAGE_SHARE=/usr/local/sage-8.9/local/share
>> >
>> > SAGE_SPKG_INST=/usr/local/sage-8.9/local/var/lib/sage/installed
>> >
>> > SAGE_SRC=/usr/local/sage-8.9/src
>> >
>> > SAGE_VERSION=8.9
>> >
>> > SELINUX_LEVEL_REQUESTED=
>> >
>> > SELINUX_ROLE_REQUESTED=
>> >
>> > SELINUX_USE_CURRENT_RANGE=
>> >
>> > SHELL=/bin/bash
>> >
>> > SHLVL=4
>> >
>> > SSH_CLIENT=130.63.254.6 61734 2029
>> >
>> > SSH_CONNECTION=130.63.254.6 61734 130.63.76.137 2029
>> >
>> > SSH_TTY=/dev/pts/0
>> >
>> > TERM=xterm-256color
>> >
>> > USER=zabrocki
>> >
>> > WEBWORK_ROOT=/opt/webwork/webwork2
>> >
>> > ***********************************************
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > sage-spkg-uninstall pkgconf '/usr/local/sage-8.9/local'
>> >
>> > Uninstalling existing 'pkgconf'
>> >
>> > Running post-uninstall script for 'pkgconf'
>> >
>> > Removing stamp file
>> '/usr/local/sage-8.9/local/var/lib/sage/installed/pkgconf-0.9.7.p2'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> >
>> > real 0m0.149s
>> >
>> > user 0m0.091s
>> >
>> > sys 0m0.046s
>> >
>> > Sage build/upgrade complete!
>> >
>> > [zabrocki@algebra sage-8.9]$ ./configure
>> >
>> > checking for a BSD-compatible install... /usr/bin/install -c
>> >
>> > checking whether build environment is sane... yes
>> >
>> > checking for a thread-safe mkdir -p... /bin/mkdir -p
>> >
>> > checking for gawk... gawk
>> >
>> > checking whether make sets $(MAKE)... yes
>> >
>> > checking whether make supports nested variables... yes
>> >
>> > checking whether to enable maintainer-specific portions of Makefiles...
>> yes
>> >
>> > checking for root user... no
>> >
>> > checking build system type... x86_64-pc-linux-gnu
>> >
>> > checking host system type... x86_64-pc-linux-gnu
>> >
>> > checking for a sed that does not truncate output... /bin/sed
>> >
>> > checking for ar... yes
>> >
>> > checking for m4... yes
>> >
>> > checking for pkg-config... /usr/bin/pkg-config
>> >
>> > checking pkg-config is at least version 0.9.0... yes
>> >
>> > checking for ranlib... yes
>> >
>> > checking for strip... yes
>> >
>> > checking for GNU or BSD tar... /bin/tar
>> >
>> > checking for GNU make... /usr/bin/make
>> >
>> > checking for latex... yes
>> >
>> > checking for perl... /usr/bin/perl
>> >
>> > checking for Perl version 5.8.0 or later... yes
>> >
>> > checking for gcc... gcc
>> >
>> > checking whether the C compiler works... yes
>> >
>> > checking for C compiler default output file name... a.out
>> >
>> > checking for suffix of executables...
>> >
>> > checking whether we are cross compiling... no
>> >
>> > checking for suffix of object files... o
>> >
>> > checking whether we are using the GNU C compiler... yes
>> >
>> > checking whether gcc accepts -g... yes
>> >
>> > checking for gcc option to accept ISO C89... none needed
>> >
>> > checking whether gcc understands -c and -o together... yes
>> >
>> > checking whether make supports the include directive... yes (GNU style)
>> >
>> > checking dependency style of gcc... none
>> >
>> > checking how to run the C preprocessor... gcc -E
>> >
>> > checking for g++... g++
>> >
>> > checking whether we are using the GNU C++ compiler... yes
>> >
>> > checking whether g++ accepts -g... yes
>> >
>> > checking dependency style of g++... none
>> >
>> > checking for gfortran... gfortran
>> >
>> > checking whether we are using the GNU Fortran compiler... yes
>> >
>> > checking whether gfortran accepts -g... yes
>> >
>> > checking for gcc... gcc
>> >
>> > checking whether we are using the GNU Objective C compiler... no
>> >
>> > checking whether gcc accepts -g... no
>> >
>> > checking dependency style of gcc... none
>> >
>> > checking for g++... g++
>> >
>> > checking whether we are using the GNU Objective C++ compiler... no
>> >
>> > checking whether g++ accepts -g... no
>> >
>> > checking dependency style of g++... none
>> >
>> > checking how to run the C++ preprocessor... g++ -E
>> >
>> > checking for grep that handles long lines and -e... /bin/grep
>> >
>> > checking for egrep... /bin/grep -E
>> >
>> > checking for ANSI C header files... yes
>> >
>> > checking for sys/types.h... yes
>> >
>> > checking for sys/stat.h... yes
>> >
>> > checking for stdlib.h... yes
>> >
>> > checking for string.h... yes
>> >
>> > checking for memory.h... yes
>> >
>> > checking for strings.h... yes
>> >
>> > checking for inttypes.h... yes
>> >
>> > checking for stdint.h... yes
>> >
>> > checking for unistd.h... yes
>> >
>> > checking complex.h usability... yes
>> >
>> > checking complex.h presence... yes
>> >
>> > checking for complex.h... yes
>> >
>> > checking for sqrt in -lm... yes
>> >
>> > checking Python version to install... 2
>> >
>> > checking BLAS library... openblas
>> >
>> > configure: === checking whether to install the gcc SPKG ===
>> >
>> > checking for the location of crti.o...
>> /usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64
>> >
>> > configure: === checking whether to install the mpir SPKG ===
>> >
>> > using mpir SPKG (via --with-mp=mpir)
>> >
>> > configure: === checking whether to install the gmp SPKG ===
>> >
>> > configure: === checking whether to install the mpfr SPKG ===
>> >
>> > using Sage's mpfr SPKG
>> >
>> > configure: === checking whether to install the ntl SPKG ===
>> >
>> > using Sage's ntl SPKG
>> >
>> > configure: === checking whether to install the flint SPKG ===
>> >
>> > using Sage's flint SPKG
>> >
>> > configure: === checking whether to install the arb SPKG ===
>> >
>> > configure: === checking whether to install the bzip2 SPKG ===
>> >
>> > checking bzlib.h usability... yes
>> >
>> > checking bzlib.h presence... yes
>> >
>> > checking for bzlib.h... yes
>> >
>> > checking for library containing BZ2_bzCompress... -lbz2
>> >
>> > checking for break... no
>> >
>> > configure: === checking whether to install the cmake SPKG ===
>> >
>> > checking for cmake >= 3.4...
>> >
>> > configure: === checking whether to install the curl SPKG ===
>> >
>> > configure: === checking whether to install the ncurses SPKG ===
>> >
>> > checking for NCURSES... no
>> >
>> > checking ncurses.h usability... yes
>> >
>> > checking ncurses.h presence... yes
>> >
>> > checking for ncurses.h... yes
>> >
>> > checking for library containing wresize... -lncurses
>> >
>> > configure: === checking whether to install the readline SPKG ===
>> >
>> > checking Installing ncurses? ... No.
>> >
>> > checking for READLINE... no
>> >
>> > checking readline/readline.h usability... yes
>> >
>> > checking readline/readline.h presence... yes
>> >
>> > checking for readline/readline.h... yes
>> >
>> > checking for library containing rl_bind_keyseq... -lreadline
>> >
>> > configure: === checking whether to install the pari SPKG ===
>> >
>> > using Sage's pari SPKG
>> >
>> > configure: === checking whether to install the eclib SPKG ===
>> >
>> > configure: === checking whether to install the ecm SPKG ===
>> >
>> > configure: === checking whether to install the zlib SPKG ===
>> >
>> > configure: === checking whether to install the libpng SPKG ===
>> >
>> > configure: === checking whether to install the freetype SPKG ===
>> >
>> > checking Installing libpng? ... yes; install freetype as well
>> >
>> > configure: === checking whether to install the gf2x SPKG ===
>> >
>> > checking for Fortran flag needed to accept free-form source...
>> -ffree-form
>> >
>> > configure: === checking whether to install the gfortran SPKG ===
>> >
>> > configure: === checking whether to install the git SPKG ===
>> >
>> > checking for git... /usr/bin/git
>> >
>> > configure: === checking whether to install the givaro SPKG ===
>> >
>> > configure: === checking whether to install the gp2c SPKG ===
>> >
>> > checking installing pari? ... yes; install gp2c as well
>> >
>> > configure: pari.cfg is $SAGE_LOCAL/lib/pari/pari.cfg
>> >
>> > using Sage's gp2c SPKG
>> >
>> > checking for ld used by gcc... /usr/bin/ld
>> >
>> > checking if the linker (/usr/bin/ld) is GNU ld... yes
>> >
>> > checking for shared library run path origin... done
>> >
>> > checking for iconv... yes
>> >
>> > checking for working iconv... yes
>> >
>> > checking for iconv declaration...
>> >
>> > extern size_t iconv (iconv_t cd, char * *inbuf, size_t
>> *inbytesleft, char * *outbuf, size_t *outbytesleft);
>> >
>> > configure: === checking whether to install the iconv SPKG ===
>> >
>> > configure: === checking whether to install the isl SPKG ===
>> >
>> > checking installing gmp/mpir? ... yes; install isl as well
>> >
>> > configure: === checking whether to install the lcalc SPKG ===
>> >
>> > configure: === checking whether to install the libffi SPKG ===
>> >
>> > checking for LIBFFI... yes
>> >
>> > configure: === checking whether to install the libgd SPKG ===
>> >
>> > configure: === checking whether to install the lrcalc SPKG ===
>> >
>> > configure: === checking whether to install the m4ri SPKG ===
>> >
>> > configure: === checking whether to install the m4rie SPKG ===
>> >
>> > configure: === checking whether to install the mpc SPKG ===
>> >
>> > using Sage's mpc SPKG
>> >
>> > configure: === checking whether to install the mpfi SPKG ===
>> >
>> > configure: === checking whether to install the ninja_build SPKG ===
>> >
>> > checking for ninja >= 1.7.2...
>> >
>> > configure: === checking whether to install the pari_elldata SPKG ===
>> >
>> > checking installing pari? ... yes; install pari_elldata as well
>> >
>> > configure: === checking whether to install the pari_galdata SPKG ===
>> >
>> > configure: === checking whether to install the pari_galpol SPKG ===
>> >
>> > checking installing pari? ... yes; install pari_galpol as well
>> >
>> > configure: === checking whether to install the pari_nftables SPKG ===
>> >
>> > checking installing pari? ... yes; install pari_nftables as well
>> >
>> > configure: === checking whether to install the pari_seadata SPKG ===
>> >
>> > checking installing pari? ... yes; install pari_seadata as well
>> >
>> > configure: === checking whether to install the pari_seadata_small SPKG
>> ===
>> >
>> > configure: === checking whether to install the patch SPKG ===
>> >
>> > configure: === checking whether to install the pcre SPKG ===
>> >
>> > configure: === checking whether to install the perl_term_readline_gnu
>> SPKG ===
>> >
>> > checking for perl module Term::ReadLine... ok
>> >
>> > checking Term::ReadLine module...... non-GNU
>> >
>> > configure: === checking whether to install the pkgconf SPKG ===
>> >
>> > checking for pkg-config >= 0.29...
>> >
>> > installing pkgconf spkg
>> >
>> > configure: === checking whether to install the rw SPKG ===
>> >
>> > configure: === checking whether to install the symmetrica SPKG ===
>> >
>> > configure: === checking whether to install the xz SPKG ===
>> >
>> > configure: === checking whether to install the yasm SPKG ===
>> >
>> > configure: === checking whether to install the zeromq SPKG ===
>> >
>> > configure: === checking whether to install the libsemigroups SPKG ===
>> >
>> > checking for LIBSEMIGROUPS... no
>> >
>> > checking SPKGs to install...
>> >
>> > 4ti2-1.6.7.p0
>> >
>> > alabaster-0.7.12
>> >
>> > appnope-0.1.0.p0
>> >
>> > arb-2.16.0.p0
>> >
>> > atlas-3.10.2.p3
>> >
>> > autotools-20141105.p0
>> >
>> > awali-1.0.2-190218
>> >
>> > babel-2.6.0
>> >
>> > backports_abc-0.5
>> >
>> > backports_functools_lru_cache-1.5
>> >
>> > backports_shutil_get_terminal_size-1.0.0.p1
>> >
>> > backports_ssl_match_hostname-3.5.0.1.p0
>> >
>> > barvinok-0.41.1
>> >
>> > benzene-20130630
>> >
>> > bleach-3.1.0
>> >
>> > bliss-0.73+debian-1+sage-2016-08-02.p0
>> >
>> > boost-1_66_0
>> >
>> > boost_cropped-1.66.0.p0
>> >
>> > brial-1.2.5
>> >
>> > buckygen-1.0
>> >
>> > bzip2-1.0.6-20150304.p0 will not be installed (configure check)
>> >
>> > cbc-2.9.4.p0
>> >
>> > ccache-3.3.4
>> >
>> > cddlib-0.94j
>> >
>> > certifi-2019.3.9
>> >
>> > cliquer-1.21.p4
>> >
>> > cmake-3.11.0
>> >
>> > cocoalib-0.99564
>> >
>> > combinatorial_designs-20140630.p0
>> >
>> > compilerwrapper-1.2
>> >
>> > configparser-3.7.4
>> >
>> > configure-2ab843c20b9601e9efb540e4a76624a8c29604eb
>> >
>> > conway_polynomials-0.5
>> >
>> > coxeter3-8ac9c71723c8ca57a836d6381aed125261e44e9e
>> >
>> > cryptominisat-5.6.8
>> >
>> > csdp-6.2.p0
>> >
>> > curl-7.62.0.p0
>> >
>> > cvxopt-1.1.8.p2
>> >
>> > cycler-0.10.0.p0
>> >
>> > cypari-2.1.1
>> >
>> > cysignals-1.10.2
>> >
>> > cython-0.29.12.p0
>> >
>> > d3js-3.4.8
>> >
>> > database_cremona_ellcurve-20161017
>> >
>> > database_jones_numfield-4
>> >
>> > database_kohel-20160724
>> >
>> > database_mutation_class-1.0
>> >
>> > database_odlyzko_zeta-20061209
>> >
>> > database_stein_watkins-20110713
>> >
>> > database_stein_watkins_mini-20070827
>> >
>> > database_symbolic_data-20070206
>> >
>> > dateutil-2.5.3
>> >
>> > decorator-4.4.0
>> >
>> > deformation-d05941b.p0
>> >
>> > defusedxml-0.6.0
>> >
>> > docutils-0.14
>> >
>> > dot2tex-2.11.3.p0
>> >
>> > e_antic-0.1.3
>> >
>> > ecl-16.1.2.p5
>> >
>> > eclib-20190226
>> >
>> > ecm-7.0.4.p1
>> >
>> > elliptic_curves-0.8.1
>> >
>> > entrypoints-0.3
>> >
>> > enum34-1.1.6
>> >
>> > fflas_ffpack-2.4.3
>> >
>> > flask-0.10.1.p0
>> >
>> > flask_autoindex-0.6.p0
>> >
>> > flask_babel-0.9.p0
>> >
>> > flask_oldsessions-0.10.p0
>> >
>> > flask_openid-1.2.5.p0
>> >
>> > flask_silk-0.2.p0
>> >
>> > flint-2.5.2.p4
>> >
>> > flintqs-1.0.p0
>> >
>> > fplll-5.2.1
>> >
>> > fpylll-0.4.1dev
>> >
>> > freetype-2.9.1
>> >
>> > fricas-1.3.5
>> >
>> > frobby-0.9.0.p2
>> >
>> > functools32-3.2.3-2.p0
>> >
>> > future-0.17.1
>> >
>> > gambit-15.1.1.p0
>> >
>> > gap-4.10.2.p1
>> >
>> > gap3-04jul17
>> >
>> > gap_jupyter-0.9
>> >
>> > gap_packages-4.10.2.p1
>> >
>> > gc-7.6.4.p0
>> >
>> > gcc-7.4.0
>> >
>> > gdb-8.2
>> >
>> > gf2x-1.2.p0
>> >
>> > gfan-0.6.2.p1
>> >
>> > gfortran-7.4.0 will not be installed (configure check)
>> >
>> > giac-1.5.0.63.p0
>> >
>> > giacpy_sage-0.6.7
>> >
>> > git-2.11.0 will not be installed (configure check)
>> >
>> > git_trac-20160625.p0
>> >
>> > givaro-4.1.1
>> >
>> > glpk-4.63.p2
>> >
>> > glucose-4.1
>> >
>> > gmp-6.1.2 will not be installed (configure check)
>> >
>> > gmpy2-2.1.0b1
>> >
>> > gp2c-0.0.10.p0
>> >
>> > graphs-20161026.p0
>> >
>> > gsl-2.5
>> >
>> > html5lib-1.0.1
>> >
>> > iconv-1.15 will not be installed (configure check)
>> >
>> > igraph-0.7.1999.p0
>> >
>> > imagesize-1.1.0
>> >
>> > iml-1.0.4p1.p2
>> >
>> > ipaddress-1.0.22
>> >
>> > ipykernel-4.8.2
>> >
>> > ipython-5.8.0
>> >
>> > ipython_genutils-0.2.0
>> >
>> > ipywidgets-7.4.2
>> >
>> > isl-0.20
>> >
>> > itsdangerous-1.1.0
>> >
>> > jinja2-2.10
>> >
>> > jmol-14.29.52
>> >
>> > jsonschema-2.6.0
>> >
>> > jupymake-0.9
>> >
>> > jupyter_client-5.2.4
>> >
>> > jupyter_core-4.4.0
>> >
>> > kenzo-1.1.7-r3
>> >
>> > kiwisolver-1.0.1
>> >
>> > latte_int-1.7.5.p0
>> >
>> > lcalc-1.23.p19
>> >
>> > libatomic_ops-7.6.2
>> >
>> > libbraiding-1.0
>> >
>> > libffi-3.2.1 will not be installed (configure check)
>> >
>> > libgd-2.1.1.1.p1
>> >
>> > libhomfly-1.02r4
>> >
>> > libogg-1.3.1.p0
>> >
>> > libpng-1.6.29.p1
>> >
>> > libsemigroups-0.6.7
>> >
>> > libtheora-1.1.1
>> >
>> > lidia-2.3.0+latte-patches-2019-05-02
>> >
>> > lie-2.2.2
>> >
>> > linbox-1.6.3
>> >
>> > lrcalc-1.2.p1
>> >
>> > lrslib-062+autotools-2017-03-03.p1
>> >
>> > m4ri-20140914.p0
>> >
>> > m4rie-20150908.p0
>> >
>> > markupsafe-1.1.0
>> >
>> > mathjax-2.7.4.p0
>> >
>> > matplotlib-2.2.4.p0
>> >
>> > maxima-5.42.2
>> >
>> > mcqd-1.0
>> >
>> > meataxe-1.0.p0
>> >
>> > mistune-0.8.4
>> >
>> > modular_decomposition-20100607
>> >
>> > mpc-1.1.0
>> >
>> > mpfi-1.5.2
>> >
>> > mpfr-4.0.1.p0
>> >
>> > mpfrcx-0.5
>> >
>> > mpir-3.0.0-644faf502c56f97d9accd301965fc57d6ec70868.p0
>> >
>> > mpmath-1.1.0
>> >
>> > nauty-26r1.p0
>> >
>> > nbconvert-5.4.0
>> >
>> > nbformat-4.4.0
>> >
>> > ncurses-6.0.p0 will not be installed (configure check)
>> >
>> > networkx-2.2
>> >
>> > ninja_build-1.8.2
>> >
>> > normaliz-3.7.2
>> >
>> > nose-1.3.7
>> >
>> > notebook-5.7.6.p0
>> >
>> > notedown-1.5.1
>> >
>> > ntl-11.3.2
>> >
>> > numpy-1.16.1
>> >
>> > openblas-0.3.6.p0
>> >
>> > openssl-1.1.1b
>> >
>> > ore_algebra-0.3
>> >
>> > p_group_cohomology-3.2
>> >
>> > packaging-18.0
>> >
>> > palp-2.1.p2
>> >
>> > pandoc_attributes-8bc82f6d
>> >
>> > pandocfilters-1.4.2
>> >
>> > pari-2.11.1.p2
>> >
>> > pari_elldata-20161017
>> >
>> > pari_galdata-20080411.p0
>> >
>> > pari_galpol-20180625
>> >
>> > pari_jupyter-1.3.2
>> >
>> > pari_nftables-20080929
>> >
>> > pari_seadata-20090618
>> >
>> > pari_seadata_small-20090618.p0
>> >
>> > patch-2.7.5
>> >
>> > pathlib2-2.3.3
>> >
>> > pathpy-7.1.p0
>> >
>> > pcre-8.40.p2
>> >
>> > perl_term_readline_gnu-1.35
>> >
>> > pexpect-4.6.0.p0
>> >
>> > pickleshare-0.7.5
>> >
>> > pillow-5.3.0.p0
>> >
>> > pip-18.1
>> >
>> > pkgconf-0.9.7.p2
>> >
>> > pkgconfig-1.4.0
>> >
>> > planarity-3.0.0.5.p0
>> >
>> > plantri-4.5
>> >
>> > polylib-5.22.5
>> >
>> > polymake-3.4
>> >
>> > polytopes_db-20170220.p0
>> >
>> > ppl-1.2.p1
>> >
>> > pplpy-0.8.4
>> >
>> > primecount-4.7
>> >
>> > prometheus_client-0.5.0
>> >
>> > prompt_toolkit-1.0.15
>> >
>> > psutil-5.2.0.p2
>> >
>> > ptyprocess-0.5.1.p0
>> >
>> > pycosat-0.6.3
>> >
>> > pycygwin-0.1
>> >
>> > pygments-2.3.1.p0
>> >
>> > pynac-0.7.26
>> >
>> > pynormaliz-2.7
>> >
>> > pyparsing-2.3.0
>> >
>> > pysingular-0.9.5
>> >
>> > python2-2.7.15.p1
>> >
>> > python3-3.7.3.p1
>> >
>> > python_igraph-0.7.1999
>> >
>> > python_openid-2.2.5.p0
>> >
>> > pytz-2018.7
>> >
>> > pyx-0.12.1.p0
>> >
>> > pyzmq-18.1.0
>> >
>> > qepcad-B.1.71
>> >
>> > qhull-2015-src-7.2.0.p1
>> >
>> > r-3.6.1
>> >
>> > ratpoints-2.1.3.p5
>> >
>> > readline-6.3.008.p0 will not be installed (configure check)
>> >
>> > requests-2.13.0
>> >
>> > rpy2-2.8.2.p1
>> >
>> > rst2ipynb-0.2.2.p0
>> >
>> > rubiks-20070912.p21
>> >
>> > rw-0.7.p0
>> >
>> > saclib-2.2.7
>> >
>> > sagenb-1.1.2
>> >
>> > sagenb_export-3.2
>> >
>> > sagetex-3.3
>> >
>> > scandir-1.9.0
>> >
>> > scipoptsuite-5.0.1
>> >
>> > scipy-1.2.0
>> >
>> > scons-1.2.0
>> >
>> > send2trash-1.5.0
>> >
>> > setuptools-40.6.3
>> >
>> > setuptools_scm-3.1.0
>> >
>> > simplegeneric-0.8.1.p0
>> >
>> > singledispatch-3.4.0.3.p0
>> >
>> > singular-4.1.1p2.p0
>> >
>> > singular_jupyter-0.9.7
>> >
>> > sip-4.18
>> >
>> > sirocco-2.0.p0
>> >
>> > six-1.12.0
>> >
>> > snowballstemmer-1.2.1.p0
>> >
>> > speaklater-1.3.p0
>> >
>> > sphinx-1.8.5.p0
>> >
>> > sphinxcontrib_websupport-1.1.0
>> >
>> > sqlite-3270100
>> >
>> > subprocess32-3.5.3
>> >
>> > surf-1.0.6-gcc6
>> >
>> > symmetrica-2.0.p11
>> >
>> > sympow-1.018.1.p13
>> >
>> > sympy-1.4.p0
>> >
>> > tachyon-0.98.9.p7
>> >
>> > tdlib-0.3.1.p0
>> >
>> > termcap-1.3.1.p3
>> >
>> > terminado-0.8.1
>> >
>> > testpath-0.4.2
>> >
>> > thebe-9624e0a0.p0
>> >
>> > threejs-r105
>> >
>> > tides-2.0.p0
>> >
>> > topcom-0.17.7
>> >
>> > tornado-4.5.2
>> >
>> > traitlets-4.3.2
>> >
>> > twisted-16.3.0.p0
>> >
>> > typing-3.6.6
>> >
>> > valgrind-3.14.0
>> >
>> > vcversioner-2.16.0.0.p0
>> >
>> > wcwidth-0.1.7.p0
>> >
>> > webencodings-0.5.1
>> >
>> > werkzeug-0.14.1
>> >
>> > widgetsnbextension-3.4.2
>> >
>> > xz-5.2.2.p0
>> >
>> > yasm-1.3.0.p0
>> >
>> > zeromq-4.2.5
>> >
>> > zlib-1.2.11.p0
>> >
>> > zn_poly-0.9.1.p0
>> >
>> > zope_interface-4.6.0
>> >
>> > checking that generated files are newer than configure... done
>> >
>> > configure: creating ./config.status
>> >
>> > config.status: creating build/make/Makefile-auto
>> >
>> > config.status: creating build/make/Makefile
>> >
>> > config.status: creating src/Makefile
>> >
>> > config.status: creating src/bin/sage-env-config
>> >
>> > config.status: executing depfiles commands
>> >
>> > config.status: executing mkdirs commands
>> >
>> > config.status: creating directory /usr/local/sage-8.9/logs/pkgs
>> >
>> > config.status: creating directory local
>> >
>> > config.status: creating directory local/bin
>> >
>> > config.status: creating directory local/etc
>> >
>> > config.status: creating directory local/include
>> >
>> > config.status: creating directory local/lib
>> >
>> > config.status: creating directory local/share
>> >
>> > config.status: creating directory local/var/lib/sage/installed
>> >
>> > [zabrocki@algebra sage-8.9]$ ./sage -f matplotlib
>> >
>> > make build/make/Makefile --stop
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9'
>> >
>> > make[1]: `build/make/Makefile' is up to date.
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9'
>> >
>> > build/bin/sage-logger \
>> >
>> > "cd build/make && ./install 'matplotlib-clean'" logs/install.log
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***
>> >
>> > }
>> >
>> > BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*`
>> >
>> > _=/bin/env
>> >
>> > CONFIGURED_CC=gcc
>> >
>> > CONFIGURED_CXX=g++
>> >
>> > CONFIGURED_FC=gfortran
>> >
>> > CONFIGURED_OBJC=gcc
>> >
>> > CONFIGURED_OBJCXX=g++
>> >
>> > CVS_RSH=ssh
>> >
>> > G_BROKEN_FILENAMES=1
>> >
>> > HISTCONTROL=ignoredups
>> >
>> > HISTSIZE=1000
>> >
>> > HOME=/home/zabrocki
>> >
>> > HOSTNAME=algebra.math.yorku.ca
>> >
>> > LANG=en_US.UTF-8
>> >
>> > LESSOPEN=||/usr/bin/lesspipe.sh %s
>> >
>> > LOADEDMODULES=
>> >
>> > LOGNAME=zabrocki
>> >
>> >
>> LS_COLORS=rs=0:di=38;5;27:ln=38;5;51:mh=44;38;5;15:pi=40;38;5;11:so=38;5;13:do=38;5;5:bd=48;5;232;38;5;11:cd=48;5;232;38;5;3:or=48;5;232;38;5;9:mi=05;48;5;232;38;5;15:su=48;5;196;38;5;15:sg=48;5;11;38;5;16:ca=48;5;196;38;5;226:tw=48;5;10;38;5;16:ow=48;5;10;38;5;21:st=48;5;21;38;5;15:ex=38;5;34:*.tar=38;5;9:*.tgz=38;5;9:*.arj=38;5;9:*.taz=38;5;9:*.lzh=38;5;9:*.lzma=38;5;9:*.tlz=38;5;9:*.txz=38;5;9:*.zip=38;5;9:*.z=38;5;9:*.Z=38;5;9:*.dz=38;5;9:*.gz=38;5;9:*.lz=38;5;9:*.xz=38;5;9:*.bz2=38;5;9:*.tbz=38;5;9:*.tbz2=38;5;9:*.bz=38;5;9:*.tz=38;5;9:*.deb=38;5;9:*.rpm=38;5;9:*.jar=38;5;9:*.rar=38;5;9:*.ace=38;5;9:*.zoo=38;5;9:*.cpio=38;5;9:*.7z=38;5;9:*.rz=38;5;9:*.jpg=38;5;13:*.jpeg=38;5;13:*.gif=38;5;13:*.bmp=38;5;13:*.pbm=38;5;13:*.pgm=38;5;13:*.ppm=38;5;13:*.tga=38;5;13:*.xbm=38;5;13:*.xpm=38;5;13:*.tif=38;5;13:*.tiff=38;5;13:*.png=38;5;13:*.svg=38;5;13:*.svgz=38;5;13:*.mng=38;5;13:*.pcx=38;5;13:*.mov=38;5;13:*.mpg=38;5;13:*.mpeg=38;5;13:*.m2v=38;5;13:*.mkv=38;5;13:*.ogm=38;5;13:*.mp4=38;5;13:*.m4v=38;5;13:*.mp4v=38;5;13:*.vob=38;5;13:*.qt=38;5;13:*.nuv=38;5;13:*.wmv=38;5;13:*.asf=38;5;13:*.rm=38;5;13:*.rmvb=38;5;13:*.flc=38;5;13:*.avi=38;5;13:*.fli=38;5;13:*.flv=38;5;13:*.gl=38;5;13:*.dl=38;5;13:*.xcf=38;5;13:*.xwd=38;5;13:*.yuv=38;5;13:*.cgm=38;5;13:*.emf=38;5;13:*.axv=38;5;13:*.anx=38;5;13:*.ogv=38;5;13:*.ogx=38;5;13:*.aac=38;5;45:*.au=38;5;45:*.flac=38;5;45:*.mid=38;5;45:*.midi=38;5;45:*.mka=38;5;45:*.mp3=38;5;45:*.mpc=38;5;45:*.ogg=38;5;45:*.ra=38;5;45:*.wav=38;5;45:*.axa=38;5;45:*.oga=38;5;45:*.spx=38;5;45:*.xspf=38;5;45:
>>
>> >
>> > MAIL=/var/spool/mail/zabrocki
>> >
>> > MAKEFLAGS= V=1
>> >
>> > MAKELEVEL=1
>> >
>> > MAKE=make
>> >
>> > MFLAGS=
>> >
>> > MODULEPATH=/usr/share/Modules/modulefiles:/etc/modulefiles
>> >
>> > MODULESHOME=/usr/share/Modules
>> >
>> >
>> PATH=/usr/local/sage-8.9/build/bin:/usr/local/sage-8.9/src/bin:/usr/local/sage-8.9/local/bin:.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > PG_ROOT=/opt/webwork/pg
>> >
>> > PWD=/usr/local/sage-8.9/build/make
>> >
>> > PYTHONPATH=/usr/local/sage-8.9/local
>> >
>> > QTDIR=/usr/lib64/qt-3.3
>> >
>> > QTINC=/usr/lib64/qt-3.3/include
>> >
>> > QTLIB=/usr/lib64/qt-3.3/lib
>> >
>> > SAGE_ARB_LIBRARY=arb
>> >
>> > SAGE_BROWSER=firefox
>> >
>> > SAGE_CONFIGURE_FLINT=--with-flint=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_GMP=--with-gmp=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPC=--with-mpc=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_MPFR=--with-mpfr=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_NTL=--with-ntl=/usr/local/sage-8.9/local
>> >
>> > SAGE_CONFIGURE_PARI=--with-pari=/usr/local/sage-8.9/local
>> >
>> > SAGE_CRTI_DIR=/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64
>> >
>> > SAGE_EXTCODE=/usr/local/sage-8.9/local/share/sage/ext
>> >
>> > SAGE_FLINT_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_FREETYPE_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_GMP_INCLUDE=/usr/local/sage-8.9/local/include
>> >
>> > SAGE_GMP_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOCAL=/usr/local/sage-8.9/local
>> >
>> > SAGE_LOGS=/usr/local/sage-8.9/logs/pkgs
>> >
>> > SAGE_MPC_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_MPFR_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_NTL_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_ORIG_PATH_SET=True
>> >
>> >
>> SAGE_ORIG_PATH=.:/usr/lib64/qt-3.3/bin:/usr/local/bin:/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/sbin:/usr/openv/netbackup/bin:/opt/dell/srvadmin/bin:/opt/webwork/webwork2/bin:/home/zabrocki/bin
>>
>> >
>> > SAGE_PARI_CFG=/usr/local/sage-8.9/local/lib/pari/pari.cfg
>> >
>> > SAGE_PARI_PREFIX=/usr/local/sage-8.9/local
>> >
>> > SAGE_PKG_CONFIG_PATH=
>> >
>> > SAGE_PYTHON_VERSION=2
>> >
>> > SAGE_ROOT=/usr/local/sage-8.9
>> >
>> > SAGE_SHARE=/usr/local/sage-8.9/local/share
>> >
>> > SAGE_SPKG_INST=/usr/local/sage-8.9/local/var/lib/sage/installed
>> >
>> > SAGE_SRC=/usr/local/sage-8.9/src
>> >
>> > SAGE_VERSION=8.9
>> >
>> > SELINUX_LEVEL_REQUESTED=
>> >
>> > SELINUX_ROLE_REQUESTED=
>> >
>> > SELINUX_USE_CURRENT_RANGE=
>> >
>> > SHELL=/bin/bash
>> >
>> > SHLVL=5
>> >
>> > SSH_CLIENT=130.63.254.6 61734 2029
>> >
>> > SSH_CONNECTION=130.63.254.6 61734 130.63.76.137 2029
>> >
>> > SSH_TTY=/dev/pts/0
>> >
>> > TERM=xterm-256color
>> >
>> > USER=zabrocki
>> >
>> > WEBWORK_ROOT=/opt/webwork/webwork2
>> >
>> > ***********************************************
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > sage-spkg-uninstall matplotlib '/usr/local/sage-8.9/local'
>> >
>> > Package 'matplotlib' is currently not installed
>> >
>> > No legacy uninstaller found for 'matplotlib'; nothing to do
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> >
>> > real 0m0.080s
>> >
>> > user 0m0.064s
>> >
>> > sys 0m0.015s
>> >
>> > Sage build/upgrade complete!
>> >
>> > make build/make/Makefile --stop
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9'
>> >
>> > make[1]: `build/make/Makefile' is up to date.
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9'
>> >
>> > build/bin/sage-logger \
>> >
>> > "cd build/make && ./install 'all-toolchain'" logs/install.log
>> >
>> > make[1]: Entering directory `/usr/local/sage-8.9/build/make'
>> >
>> > make[1]: Leaving directory `/usr/local/sage-8.9/build/make'
>> >
>> > *** ALL ENVIRONMENT VARIABLES BEFORE BUILD: ***
>> >
>> > }
>> >
>> > BASH_FUNC_module()=() { eval `/usr/bin/modulecmd bash $*`
>> >
>> > _=/bin/env
>> >
>> > CONFIGURED_CC=gcc
>> >
>> > CONFIGURED_CXX=g++
>> >
>> > CONFIGURED_FC=gfortran
>> >
>> > CONFIGURED_OBJC=gcc
>> >
>> > CONFIGURED_OBJCXX=g++
>> >
>> > CVS_RSH=ssh
>> >
>> > G_BROKEN_FILENAMES=1
>> >
>> > HISTCONTROL=ignoredups
>> >
>> > HISTSIZE=1000
>> >
>> > HOME=/home/zabro
>>
>> ...
>
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