Jason,
regarding /tmp/uwsgi.sock I just change by hand its permission to 777
once it is created. Not an elegant way, I know, but it works.
I was confused about $SERVER and single-cell-server in your
instructions.
After the item 'Jmol'
the 'cd $SERVER/static' should be 'cd $SERVER/single-cell-server/
static'.
The item 'Single Cell Server' states:
-------------
First, minify CSS and JavaScript files (this is required):
cd $SERVER/static
make
---------------
and I think it should be
------------------
First, minify CSS and JavaScript files (this is required):
cd $SERVER/single-cell-server/static
make
-----------------
Your excerpt of singlecell_config.py showed my error (I wrote
'python': sage -python in the device-config, in place of python='sage -
python' before device-config). I suggest inserting this part of
singlecell_config.py in the instructions.
So, now my server is working ok (I can use Sage!). Nevertheless, I
don't get plots yet (I did not patch Sage as indicated in your
instructions).
Thank you very much!
Francisco
On Sep 13, 8:35 pm, Jason Grout <jason-s...@creativetrax.com> wrote:
> On 9/13/11 12:45 PM, fbotana wrote:
>
> > Finally, I solved (almost) all problems.
>
> > There was a problem with permissions on /tmp/uwsgi.sock.
>
> Ah, okay. How should we change the instructions to make it work?
>
> > It remains an issue. I get "NOTE: Sage Mode is unavailable, which may
> > cause errors if using Sage-specific syntax.". Probably I forgot
> > something, but I cannot figure what the problem is (yes, the box is
> > ticked).
>
> Did you install sage and are you using sage to run the device? Here's
> an excerpt from my singlecell_config.py:
>
> python='../sage/sage -python'
> device_config={
> 'workers': 150,
> 'python': python,
> 'untrusted-account': 'deviceaccount@localhost',
> 'untrusted-python': 'nice '+python,
> 'untrusted-cpu': 100, # seconds
> 'untrusted-mem': 2500, # megabytes
> }
>
> Note that the "untrusted-python" is really 'sage -python'
>
> As a test, can you try doing this on your server?
>
> import sage
>
> Thanks,
>
> Jason
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