hasn't changed either.
>>>>>>>>
>>>>>>>> BTW, is jrap no longer supported? Could you point to the right
>>>>>>>> person
>>>>>>>> if it still is.
>>>>>>>> Thanks,
>>>>>>>>
-8, Eric Deutsch wrote:
And if you’re in the market for a Java implementation (like JRAP),
then I’d recommend jmzreader:
http://code.google.com/p/jmzreader/
Cheers,
Eric
From: spctools...@googlegroups.com
[mailto:spctools...@googlegroups.com] On Behalf Of Jimmy Eng
Sent: Tuesday, Jan
ieve MzXML2Search currently uses the mzParser code which you
> can
> >>>>>>> find in MSToolkit.
> >>>>>>>
> >>>>>>>
> >>>>>>> On Tue, Jan 15, 2013 at 10:23 PM, David Zhao
> >>>>>>
sted. My problems that we have a lot of codes still rely on jrap
>>>>>>>> to
>>>>>>>> parse mzXML file, but jrap can't seem to parse mzXML generated by
>>>>>>>> ReAdW from
>>>>&g
13 9:25:41 PM UTC-8, Eric Deutsch wrote:
>>>>>
>>>>>> And if you’re in the market for a Java implementation (like JRAP),
>>>>>> then I’d recommend jmzreader:
>>>>>>
>>>>>> http://code.google.com/p/**jmzreader/<http:
gt; then I’d recommend jmzreader:
>>>>>
>>>>> http://code.google.com/p/**jmzre**ader/<http://code.google.com/p/jmzreader/>
>>>>>
>>>>>
>>>>>
>>>>> Cheers,
>>>>>
>>>>> Eric
>
e market for a Java implementation (like JRAP), then
>>>> I’d recommend jmzreader:
>>>>
>>>> http://code.google.com/p/**jmzre**ader/<http://code.google.com/p/jmzreader/>
>>>>
>>>>
>>>>
>>>> Cheers,
>>>>
e.google.com/p/**jmzreader/<http://code.google.com/p/jmzreader/>
>>>
>>>
>>>
>>> Cheers,
>>>
>>> Eric
>>>
>>>
>>>
>>>
>>>
>>> *From:* spctools...@googlegroups.**com [mailto:spctools...@**
gt; http://code.google.com/p/**jmzreader/<http://code.google.com/p/jmzreader/>
>>
>>
>>
>> Cheers,
>>
>> Eric
>>
>>
>>
>>
>>
>> *From:* spctools...@googlegroups.**com [mailto:spctools...@**
>> googlegroups.com] *
Of *Jimmy Eng
> *Sent:* Tuesday, January 15, 2013 9:18 PM
> *To:* spctools...@googlegroups.com
> *Subject:* Re: [spctools-discuss] Re: JRAP question
>
>
>
> At this point, you can probably not worry about jrap not being updated
> because the mzXML format isn't really in
, 2013 9:18 PM
*To:* spctools-discuss@googlegroups.com
*Subject:* Re: [spctools-discuss] Re: JRAP question
At this point, you can probably not worry about jrap not being updated
because the mzXML format isn't really in flux. But if you want to look for
alternatives ...
Quite a few folks
At this point, you can probably not worry about jrap not being updated
because the mzXML format isn't really in flux. But if you want to look for
alternatives ...
Quite a few folks here would tell you to look at ProteoWizard
http://proteowizard.sourceforge.net/
Possibly look into OpenMS (I honest
Thanks Jimmy! So it sounds like jrap is not being updated anymore. If i'd
like to keep up to date with a mzXML parser, which library should I follow?
Thanks,
David
On Tuesday, January 15, 2013 7:14:17 PM UTC-8, Jimmy Eng wrote:
>
> I'm not a jrap user nor do I know what file are associated with
I'm not a jrap user nor do I know what file are associated with what
versions. But if you are looking for jrap_3.0.jar and
jakarta-regexp-1.4.jar, you can find them here:
http://sashimi.svn.sourceforge.net/viewvc/sashimi/trunk/jrap/sax2/
On Tue, Jan 15, 2013 at 7:00 PM, David Zhao wrote:
> Is
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