Re: [Bibdesk-users] applescript for URL doesn't work

2007-12-29 Thread Christiaan Hofman
Yes, there was a bug in the URL scripting accessor. Apparently nobody  
uses it anyway, as it has gone unnoticed for a long time. That's  
good, as it will is deprecated in the next release.

Christiaan

On 29 Dec 2007, at 5:44 AM, Derick Fay wrote:

 I'm trying to add a publication using Tiger and BD 1.3.12 using the
 following applescript:

 tell application BibDesk
   activate
   tell document 1
   make new publication with properties {URL:asdfadsf,  
 keywords:asdf}
   end tell
 end tell

 The result is a new publication with the keywords set to asdf (as
 expected) and a blank URL (the problem).

 (other fields -- title, local file, abstract, type all seem to work
 as expected -- the URL field is the only one I've found that doesn't,
 though I haven't tested them all).

 Derick


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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Patrick Celka
Dear Adam,

I noticed that when I select an entry under 'proceedings' format from my
database and do a copy as - Latex, the authors and other fields are
missing. I tried 'article' and 'book' and it is working fine so far.

Patrick

On Dec 28, 2007 7:44 AM, Adam R. Maxwell [EMAIL PROTECTED] wrote:

 I think we've fixed the bugs reported by nightly build testers
 (thanks!), so I'd like to get a release out soon.  Any showstoppers or
 other things that really need to be resolved?

 There won't be any changes to the main table in this release.
 Christiaan's proposal for view locations isn't resolved, though; do we
 want to change that before the release, or get feedback from a larger
 set of users?

 thanks,
 adam

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Christiaan Hofman
This is not an issue, and if it were an issue it'd be a bibtex issue,  
not a BibDesk's. A proceedings item does not have an author field (in  
the standard bibtex styles.) Compare the type info in the Advanced  
Defaults preferences.


Christiaan

On 29 Dec 2007, at 2:42 PM, Patrick Celka wrote:


Dear Adam,

I noticed that when I select an entry under 'proceedings' format  
from my database and do a copy as - Latex, the authors and other  
fields are missing. I tried 'article' and 'book' and it is working  
fine so far.


Patrick

On Dec 28, 2007 7:44 AM, Adam R. Maxwell [EMAIL PROTECTED] wrote:
I think we've fixed the bugs reported by nightly build testers
(thanks!), so I'd like to get a release out soon.  Any showstoppers or
other things that really need to be resolved?

There won't be any changes to the main table in this release.
Christiaan's proposal for view locations isn't resolved, though; do we
want to change that before the release, or get feedback from a larger
set of users?

thanks,
adam

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Simon Spiegel

On 28.12.2007, at 00:44, Adam R. Maxwell wrote:

 I think we've fixed the bugs reported by nightly build testers
 (thanks!), so I'd like to get a release out soon.  Any showstoppers or
 other things that really need to be resolved?

A small display bug, visible in the latest nightly:

- Enter a term  in the search bar and chose Any Field.
- Open one of the displayed search results.
- Edit one of the already existing fields.
- Close the item window
- The item you just edited is no longer displayed in the main view,  
although it should still be shown by the search term.

This doesn't seem to happen, when I search for a person.

simon

--
Simon Spiegel
Steinhaldenstr. 50
8002 Zürich

Telephon: ++41 44 451 5334
Mobophon: ++41 76 459 60 39

http://www.simifilm.ch

„In a world getting more and more democratic, film directing is the  
last resort for dictators.“ Francis Ford Coppola




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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Christiaan Hofman

On 29 Dec 2007, at 2:58 PM, Simon Spiegel wrote:


 On 28.12.2007, at 00:44, Adam R. Maxwell wrote:

 I think we've fixed the bugs reported by nightly build testers
 (thanks!), so I'd like to get a release out soon.  Any  
 showstoppers or
 other things that really need to be resolved?

 A small display bug, visible in the latest nightly:

 - Enter a term  in the search bar and chose Any Field.
 - Open one of the displayed search results.
 - Edit one of the already existing fields.
 - Close the item window
 - The item you just edited is no longer displayed in the main view,
 although it should still be shown by the search term.


Strange, we do update the search index before we redo the search. Or  
is indexing too slow?

 This doesn't seem to happen, when I search for a person.


It should behave the same there, but only when you change a name  
(just 'fixed' that).

Christiaan

 simon

 --
 Simon Spiegel
 Steinhaldenstr. 50
 8002 Zürich

 Telephon: ++41 44 451 5334
 Mobophon: ++41 76 459 60 39

 http://www.simifilm.ch

 „In a world getting more and more democratic, film directing is the
 last resort for dictators.“ Francis Ford Coppola




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[Bibdesk-users] future of BibDesk Applescript

2007-12-29 Thread Derick Fay
Thanks Christiaan
Could you clarify your response?  Is the existing use of Applescript  
to create pubs. being deprecated?  Or just access to the URL field?   
In either case, will there be a new approach to create publications  
via Applescript introduced, or is it just being dropped?
thanks
Derick



 Yes, there was a bug in the URL scripting accessor. Apparently nobody
 uses it anyway, as it has gone unnoticed for a long time. That's
 good, as it will is deprecated in the next release.

 Christiaan

 On 29 Dec 2007, at 5:44 AM, Derick Fay wrote:

 I'm trying to add a publication using Tiger and BD 1.3.12 using the
 following applescript:

 tell application BibDesk
  activate
  tell document 1
  make new publication with properties {URL:asdfadsf,
 keywords:asdf}
  end tell
 end tell

 The result is a new publication with the keywords set to asdf (as
 expected) and a blank URL (the problem).

 (other fields -- title, local file, abstract, type all seem to work
 as expected -- the URL field is the only one I've found that doesn't,
 though I haven't tested them all).

 Derick






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[Bibdesk-users] generating conditional cite keys

2007-12-29 Thread P Kishor
I frequently file books and committee reports (those published by the
National Academy Press are a good example) where there is no author
but there are editors. Since my BD generates cite_keys as %a1_%Y_u2,
the %a part goes unfilled in the cite_keys for these reports. Is there
any way to ask BD to use the author, but if author is not set then use
the editor?

Another question -- what is the best practice? Do folks file the
entire reports? (that is what I do, because that is how I find them).
But then, how do you cite individual papers within those reports as in
case of conf. proceedings, the reports are typically a set of papers
by indiv. authors preceded by come commentary by the editors... can I
generate indiv. cite_keys for each component paper? I realize I am
probably asking a basic BD-use question, so if this use-case is
already described somewhere, kindly point me to it.

Finally, I haven't yet received any scapegoat to give me his/her
*very* long manuscript to test my Perl script. If you are hesitant
about privacy, I will reiterate my solemn promise to use your work
*only* for testing (of course, I will probably learn a lot from
glancing at your work, which I will have to do in order to determine
the efficacy of my script). You will be credited, of course, and if my
script does become useful, you would have contributed to another
BD-enhancing tool. And, needless to say, your manuscript  and bib will
not leave my laptop ever.

Graçias.

-- 
Puneet Kishor

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Re: [Bibdesk-users] test manuscript and bib needed

2007-12-29 Thread P Kishor
On 12/29/07, Stephan Kurz [EMAIL PROTECTED] wrote:
 Dear Puneet,

 I could offer a 188 page document produced in LaTeX and a 286 item
 bibliography for testing if this meets your requirements. But I only
 have LaTeX sources and the final pdf output; would it be required that I
 convert that to rtf with citations in any special format like a LaTeX
 style \cite[1564]{blah} command?

Stephan, thanks for the offer... yes, I can only use RTF with
citations inserted in the TeX style like you mentioned...
\cite{cite_key}

The reason I am writing this script is because I don't have either the
smarts or the patience to deal with TeX. My life is interesting enough
with RTF, which, as I mentioned earlier, I accomplish via Scrivener,
with post-finishing in Apple Pages.

 This would probably take me some time
 to accomplish, or rather it probably wouldn't make much sense to invest
 that time  if others have already sent you their manuscripts.

No one has as of yet offered. You are the first one, so unless someone
has already got a manuscript in RTF, you would be it. Why don't we
wait for a few days. If I don't hear from anyone by the end of next
week then I will send you an email to ask you to write me out an RTF
of your manuscript. Of course, you will also need to send me
instructions on your preferred citation style. While I don't intend to
compete with Endnote's ~ 3000 options of styles, I would like to build
a few really popular ones, and then, later on, try and develop a
templating system so users could create their own styles (that seems a
bit tough though since these citation styles seem to be so
inconsistent, particularly in formatting subsequent citations of the
same work).

Many thanks for your offer, and have a great new year in the meantime.


 Thanks for your good idea (although I am indeed quite happy using LaTeX
 for my manuscripts! ;-))!
 Stephan



 P Kishor wrote:
  Hi all,
 
  I have been creating a Perl script for scanning through RTF and
  replacing the cite-keys with the actual citations. I have been testing
  it on a small manuscript I have, but I would like to do more extensive
  tests. Would someone be kind enough to send me their manuscript and
  the associated bib offlist? I solemnly promise to use it ONLY for my
  testing and for nothing else. The longer the manuscript the better. As
  expected, the script is really very fast, producing results almost
  instantaneously, but very long and complicated manuscripts would be a
  better yardstick.
 
  Oh, and also send me the style of citations that you want to deploy. I
  have currently created one for the Data Science Journal
  http://dsj.codataweb.org/instructions.pdf, but I would be happy to
  extend it for other styles as well. The way I have written the script
  makes it easy to add new styles.
 
  To give a brief background -- I really love BD but I hate TeX. I
  haven't found any reasonable solution for me to use for inserting
  cite-keys and converting them to actual citations. The existing
  solutions are inadequate for my needs -- the Ruby solution seems to be
  DOA, the AppleScript solution is too slow and works only with Pages. I
  use and like Perl, and that allows me to do what I want -- I write my
  manuscript in Scrivener, using the BD Autocomplete plugin to do the
  insertions, and then I export the manuscript to RTF, run my Perl
  script to convert the cite-keys to citations, and then open the
  resulting RTF in Pages to do the final layout. That works for me. It
  might work for others.
 
  Many thanks in advance.
 




-- 
Puneet Kishor

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Re: [Bibdesk-users] future of BibDesk Applescript

2007-12-29 Thread Adam R. Maxwell
On Dec 29, 2007, at 8:34 AM, Derick Fay wrote:

 Thanks Christiaan
 Could you clarify your response?  Is the existing use of Applescript
 to create pubs. being deprecated?

Absolutely not.

 Or just access to the URL field?

Yes, the URL field itself is being deprecated.

 In either case, will there be a new approach to create publications
 via Applescript introduced, or is it just being dropped?

There's a new and more flexible approach to handling files.  Please  
try the last nightly build and take a look at the scripting dictionary.

-- 
adam



 Yes, there was a bug in the URL scripting accessor. Apparently nobody
 uses it anyway, as it has gone unnoticed for a long time. That's
 good, as it will is deprecated in the next release.

 Christiaan

 On 29 Dec 2007, at 5:44 AM, Derick Fay wrote:

 I'm trying to add a publication using Tiger and BD 1.3.12 using the
 following applescript:

 tell application BibDesk
 activate
 tell document 1
 make new publication with properties {URL:asdfadsf,
 keywords:asdf}
 end tell
 end tell

 The result is a new publication with the keywords set to asdf (as
 expected) and a blank URL (the problem).

 (other fields -- title, local file, abstract, type all seem to work
 as expected -- the URL field is the only one I've found that  
 doesn't,
 though I haven't tested them all).

 Derick






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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread James Howison
Patrick, what are you trying to reference with the proceedings type?   
One is typically referring to a specific article from a conference  
(inproceedings), which certainly has an author field, rather than the  
bound book that houses the article (proceedings), which is going to  
have Editors rather than an Author.

--J

On Dec 29, 2007, at 8:51 AM, Christiaan Hofman wrote:

 This is not an issue, and if it were an issue it'd be a bibtex  
 issue, not a BibDesk's. A proceedings item does not have an author  
 field (in the standard bibtex styles.) Compare the type info in the  
 Advanced Defaults preferences.

 Christiaan

 On 29 Dec 2007, at 2:42 PM, Patrick Celka wrote:

 Dear Adam,

 I noticed that when I select an entry under 'proceedings' format  
 from my database and do a copy as - Latex, the authors and other  
 fields are missing. I tried 'article' and 'book' and it is working  
 fine so far.

 Patrick

 On Dec 28, 2007 7:44 AM, Adam R. Maxwell [EMAIL PROTECTED] wrote:
 I think we've fixed the bugs reported by nightly build testers
 (thanks!), so I'd like to get a release out soon.  Any showstoppers  
 or
 other things that really need to be resolved?

 There won't be any changes to the main table in this release.
 Christiaan's proposal for view locations isn't resolved, though; do  
 we
 want to change that before the release, or get feedback from a larger
 set of users?

 thanks,
 adam

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 ---

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 e-Service for Academics and Researchers

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Re: [Bibdesk-users] generating conditional cite keys

2007-12-29 Thread Christiaan Hofman

On 29 Dec 2007, at 5:37 PM, P Kishor wrote:

 I frequently file books and committee reports (those published by the
 National Academy Press are a good example) where there is no author
 but there are editors. Since my BD generates cite_keys as %a1_%Y_u2,
 the %a part goes unfilled in the cite_keys for these reports. Is there
 any way to ask BD to use the author, but if author is not set then use
 the editor?


That's exactly what %p does.

 Another question -- what is the best practice? Do folks file the
 entire reports? (that is what I do, because that is how I find them).
 But then, how do you cite individual papers within those reports as in
 case of conf. proceedings, the reports are typically a set of papers
 by indiv. authors preceded by come commentary by the editors... can I
 generate indiv. cite_keys for each component paper? I realize I am
 probably asking a basic BD-use question, so if this use-case is
 already described somewhere, kindly point me to it.


It's more a citation and bibtex question than a bibdesk question. If  
you need to cite individual papers/proceedings in a collection you  
should create individual items for those. have a look at the  
inproceedings and incollection types. they are also frequently used  
in combination with the Crossref field. You can also use citation  
fields (see the Defaults prefs) to make it easier to relate items in  
BibDesk, though that has no influence on the bibtex.

Christiaan

 Finally, I haven't yet received any scapegoat to give me his/her
 *very* long manuscript to test my Perl script. If you are hesitant
 about privacy, I will reiterate my solemn promise to use your work
 *only* for testing (of course, I will probably learn a lot from
 glancing at your work, which I will have to do in order to determine
 the efficacy of my script). You will be credited, of course, and if my
 script does become useful, you would have contributed to another
 BD-enhancing tool. And, needless to say, your manuscript  and bib will
 not leave my laptop ever.

 Graçias.

 -- 
 Puneet Kishor



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Re: [Bibdesk-users] generating conditional cite keys

2007-12-29 Thread P Kishor
On 12/29/07, James Howison [EMAIL PROTECTED] wrote:

 On Dec 29, 2007, at 11:37 AM, P Kishor wrote:

  I frequently file books and committee reports (those published by the
  National Academy Press are a good example) where there is no author
  but there are editors. Since my BD generates cite_keys as %a1_%Y_u2,
  the %a part goes unfilled in the cite_keys for these reports. Is there
  any way to ask BD to use the author, but if author is not set then use
  the editor?

 %p should do this rather than %a.  At least that's what the drop down
 for Authors or Editors shows.

  Another question -- what is the best practice? Do folks file the
  entire reports? (that is what I do, because that is how I find them).
  But then, how do you cite individual papers within those reports as in
  case of conf. proceedings, the reports are typically a set of papers
  by indiv. authors preceded by come commentary by the editors... can I
  generate indiv. cite_keys for each component paper? I realize I am
  probably asking a basic BD-use question, so if this use-case is
  already described somewhere, kindly point me to it.

 Have you tried inproceedings?  I don't heavily use cross-refs, but
 presumably you can create a single proceedings and cross-ref a set of
 inproceedings.  You might also explore book/inbook and incollection.

Dang it! that's what inproceedings is for! Well then, I am going to
try this out, but if someone has written up a usecase for using
proceedings + inproceedings or book + inbook along with crossref, I
would love to read that.

Many thanks,

..

Puneet

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[Bibdesk-users] HTML export template

2007-12-29 Thread P Kishor
chatty today...

So, I am exporting my bib as html to send to a colleague, and it
occurs to me... this would be a good case of using frames. The classic
table-of-contents pane listing all substr(%Title, 0, 40) . '...'
(pardon my Perl), and the contents pane jumping to that specific
listing. I can think of many other variations (titles grouped by
authors/editors, by year, etc.) but they may require more
post-processing.

Before I embark on inventing something like that, has someone already
done something like this and is happy to share?

-- 
Puneet Kishor

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Alexander H. Montgomery
Two points regarding the new URL/file system:

1)When URLs are dropped onto the side pane, a change field script  
hook is not activated. Activating this script hook would be very  
useful for those of us who extensively use the url field in our  
bibliographies, since a hook could then be created that automatically  
copies a URL dropped onto the side pane into the url field as well.

This probably isn't needed for files dropped onto the side pane, since  
there is already an autofile script hook that still works (it  
correctly identifies that the field local file has changed).

2)It would be useful to have some workaround for dragging a piece of  
text and dropping it on the URL/file side pane by trying to parse it  
as a URL, since it's currently a pain to try to add a URL unless the  
system already knows that it's a URL (e.g., Firefox, text documents,  
etc.)

-AHM

On 2007-12-27, at 3:44 PM, Adam R. Maxwell wrote:

 I think we've fixed the bugs reported by nightly build testers
 (thanks!), so I'd like to get a release out soon.  Any showstoppers or
 other things that really need to be resolved?

 There won't be any changes to the main table in this release.
 Christiaan's proposal for view locations isn't resolved, though; do we
 want to change that before the release, or get feedback from a larger
 set of users?

 thanks,
 adam

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Adam R. Maxwell

On Dec 29, 2007, at 11:38 AM, Alexander H. Montgomery wrote:

 2)It would be useful to have some workaround for dragging a piece of
 text and dropping it on the URL/file side pane by trying to parse it
 as a URL, since it's currently a pain to try to add a URL unless the
 system already knows that it's a URL (e.g., Firefox, text documents,
 etc.)

I just checked in a change for this: we now try to interpret a string  
as a URL.  This is pretty difficult to do reliably, though, and I'm  
not enthusiastic about it.  Didn't Christiaan say that Firefox fixed  
that URL problem?

-- 
adam

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Alexander H. Montgomery
On 2007-12-29, at 12:13 PM, Christiaan Hofman wrote:


 On 29 Dec 2007, at 8:38 PM, Alexander H. Montgomery wrote:

 Two points regarding the new URL/file system:

 1)When URLs are dropped onto the side pane, a change field script
 hook is not activated. Activating this script hook would be very
 useful for those of us who extensively use the url field in our
 bibliographies, since a hook could then be created that automatically
 copies a URL dropped onto the side pane into the url field as well.


 That's because there is no field that changes. There may be on or
 more new script hooks for this in the future.

OK, I'll put in a feature request; this is fairly important for my work.

On 2007-12-29, at 12:23 PM, Adam R. Maxwell wrote:


 On Dec 29, 2007, at 11:38 AM, Alexander H. Montgomery wrote:

 2)It would be useful to have some workaround for dragging a piece of
 text and dropping it on the URL/file side pane by trying to parse it
 as a URL, since it's currently a pain to try to add a URL unless the
 system already knows that it's a URL (e.g., Firefox, text documents,
 etc.)

 I just checked in a change for this: we now try to interpret a string
 as a URL.  This is pretty difficult to do reliably, though, and I'm
 not enthusiastic about it.  Didn't Christiaan say that Firefox fixed
 that URL problem?

I think that he said it was fixed in Firefox 3.0.

-AHM

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Alexander H. Montgomery
On 2007-12-29, at 2:52 PM, Ingrid Giffin wrote:

 On 12/29/07 2:35 PM, Adam R. Maxwell [EMAIL PROTECTED] wrote:


 On Dec 29, 2007, at 1:17 PM, Derick Fay wrote:

 One thing I miss (having migrated my files) is the display of the
 file icons in the column view (the new file fields can't be added to
 the column view)-- I would frequently open a file by double-clicking
 the pdf icon assoc. with a pub. in the column view.  Now it seems I
 need to select the item just to see if it has an associated file,
 then mouse over to the r/h side to open the pdf.  Would it be
 possible to put an indicator in the columns view to show whether a
 pub. has file(s) associated?  Perhaps double-clicking it could
 execute the Publication   Open Linked Files command.

 We're not planning to add a table representation unless it's really
 absolutely necessary, since it implies a single file-pub
 relationship.  We could do first file, second file... as with  
 authors,
 but that's limited as well.

 Do I understand correctly, that there will no longer be the file  
 icon in the
 column view? This would be a major loss of functionality for me.


 --Ingrid Giffin

Me as well. Being able to eyeball which publications have files and to  
open them is quite useful. One possibility might be to have something  
like Mail's attachment column; if narrow, it shows a paperclip; if  
widened, the paperclip as well as the number of items attached. I  
don't think there's a need to have first file/second file/third file  
columns. Currently I'm planning on putting in a script hook on  
autofile to copy over the first linked file to local-url, but as  
presumably local-url will be deprecated and eventually may disappear,  
that's not a permanent solution.

(This is the case for URLs as well, but significantly less so...)

-A

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Adam R. Maxwell

On Dec 29, 2007, at 2:52 PM, Ingrid Giffin wrote:

 Do I understand correctly, that there will no longer be the file  
 icon in the
 column view?

Yes.

 This would be a major loss of functionality for me.

Have you tried the new system?  There's a lot of functionality added,  
so please use it for a while and let us know you're trying to do  
that's no longer possible.

thanks,
adam

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Re: [Bibdesk-users] votes on 1.3.13

2007-12-29 Thread Adam R. Maxwell

On Dec 29, 2007, at 3:09 PM, Alexander H. Montgomery wrote:

 On 2007-12-29, at 2:52 PM, Ingrid Giffin wrote:

 Do I understand correctly, that there will no longer be the file
 icon in the
 column view? This would be a major loss of functionality for me.


 --Ingrid Giffin

 Me as well. Being able to eyeball which publications have files and to
 open them is quite useful. One possibility might be to have something
 like Mail's attachment column; if narrow, it shows a paperclip; if
 widened, the paperclip as well as the number of items attached.

I like this idea; I think that's probably what the majority of people  
use the file column for anyway.  Would we need a separate column for  
non-file links?

 I don't think there's a need to have first file/second file/third  
 file
 columns. Currently I'm planning on putting in a script hook on
 autofile to copy over the first linked file to local-url, but as
 presumably local-url will be deprecated and eventually may disappear,
 that's not a permanent solution.

Local-Url is deprecated right now.  Much of its functionality will  
still be present (maybe until 1.4?), but it would be better to switch  
as soon as possible.  If there's something missing that keeps you from  
using the new stuff, this is the time to let us know...

adam


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[Bibdesk-users] another small inconsistency/bug

2007-12-29 Thread Derick Fay
I added a file to a publication.  Then I moved the file (using the  
finder).  When I open the publication record in BibDesk and double- 
click the file icon, the file opens.  But when I have the publication  
record closed  double-click on the file preview icon (in the new R- 
hand preview area) the file doesn't opennothing happens.


With every other pub., double-clicking the icon in the preview area  
opens the file, so I'm assuming this has something to do with having  
moved the file.


--Derick




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Re: [Bibdesk-users] another small inconsistency/bug

2007-12-29 Thread Adam R. Maxwell

On Dec 29, 2007, at 9:47 PM, Derick Fay wrote:

 I added a file to a publication.  Then I moved the file (using the  
 finder).  When I open the publication record in BibDesk and double- 
 click the file icon, the file opens.  But when I have the  
 publication record closed  double-click on the file preview icon  
 (in the new R-hand preview area) the file doesn't opennothing  
 happens.

 With every other pub., double-clicking the icon in the preview area  
 opens the file, so I'm assuming this has something to do with having  
 moved the file.

Try deselecting and reselecting it in the main window...I don't recall  
if that will help or not; there's some caching that's interfering.  If  
you close and reopen the doc after moving in the Finder, it should  
work fine.

-- 
adam


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