Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 5:46 PM, Ondřej Čertík  wrote:
> On Wed, Aug 22, 2012 at 8:50 AM, David Cournapeau  wrote:
>> On Wed, Aug 22, 2012 at 4:12 PM, Ondřej Čertík  
>> wrote:
>>> On Wed, Aug 22, 2012 at 7:35 AM, Travis Oliphant  
>>> wrote:
 On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:

> On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  
> wrote:
>>
>> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>>
>>
>>
>> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
>> wrote:
>>>
>>> I'm actually not sure, why.   I think the issue is making sure that the
>>> release manager can actually "build" NumPy without having to buy a
>>> particular compiler.
>>
>>
>> That would help, yes. MS Express doesn't work under Wine last time I 
>> checked
>> by the way.
>>
>> However, the issue is more than just one license. There's a large number 
>> of
>> packages that depend on numpy and provide binaries. If they can't make 
>> those
>> compatible with numpy ones, that's a problem. Users will first install 
>> numpy
>> 64-bit, and then later find out that part of the scientific Python stack
>> isn't available to them anymore.
>>
>>
>>
>> As far as I understand, you don't *have* to build all downstream
>> dependencies with the same compiler that NumPy was built with unless your
>> extension relies on the way C-functions pass structures on the stack (not
>> pointers to them, but structures as a whole) or if it relies on the
>> representation of FILE*.  At one time all structures were passed as
>> pointers specifically for this reason.   The FILE* situation is a 
>> problem,
>> but most extensions don't use NumPy C-API calls that have a FILE* 
>> argument.
>
> It is much more pervasive than that, unfortunately. And for fortran,
> it is much worse, because if we build scipy or numpy with Intel
> Fortran, I think we pretty much force everyone to use intel fortran
> for *any* binary on top of them.

 Can you be more specific?   Does the calling convention for C-routines 
 created with Intel Fortran differ so much?
>>>
>>>
>>> I have the same question as Travis. If you are interested about ABI
>>> for Fortran, I have created this FAQ:
>>>
>>> http://fortran90.org/src/faq.html#are-fortran-compilers-abi-compatible
>>>
>>> Since NumPy only calls the Fortran routines, but does not expose them,
>>> then the only issue is how to build NumPy with (let's say) Intel
>>> Fortran. That's a separate issue.
>>> Once NumPy is built, then nobody cares, because they only need to
>>> interface the C routines, if anything at all.
>>>
>>> As far as Fortran runtime library goes (which of course is different
>>> for Intel and gfortran), I am currently not sure whether it is
>>> possible to mix them, but I think you probably can, if numpy .so is
>>> using Intel, and my own .so is using gfortran.
>>>
>>>
>>> Finally, if NumPy is build using MSVC, does this force everybody to
>>> use the same C compiler? I thought that C compilers are ABI
>>> compatible, at least Intel C and gfortran C are ABI compatible.  Is
>>> MSVC different?
>>>
>>> Btw, to correctly call Fortran from C, one should always be using the
>>> iso_c_binding module, as explained here:
>>>
>>> http://fortran90.org/src/best-practices.html#interfacing-with-c
>>>
>>> Then the Fortran code becomes just like any other C library.
>>
>> It is unfortunately more complicated than that.
>>
>>  1 regarding fortran runtimes: I have never been able to link a
>> gfortran object file with Visual Studio linker (link.exe).
>
> You cannot mix the Fortran object .o files between compilers.
> That will never work, because Fortran compilers are not ABI
> compatible, see the FAQ.

I mean linking .o from the *same* compiler into a library through the
MS linker (link.exe instead of gcc one). That's how it works in
numpy/scipy so far, where we can link g77-produced .o files with the
MS compiler.

Most platforms have one linker, e.g. I think intel fortran compiler on
linux uses ld underneath.
>
> The only way this could work is if you can mix gcc .o file with MSVC
> linker (I don't
> know if this is possible or not). If that works,
> then you should be able to use iso_c_binding in Fortran to produce
> gcc's compatible .o
> file and then link it.

The problem is NOT communicating between C and fortran. I could
produce a simple fortran dll used inside a MSVC program, as long as
this fortran dll did not use anything from the fortran runtime. See
http://cournape.wordpress.com/2009/03/09/gfortran-visual-studio/ for
an actual example.

The problem is when you need the fortran runtime (which you do for scipy).

>
> Which errors were you getting when linking it? Was it a problem with
> libgfortran runtime
> (that you of course need to link as well)? This runtime can be a problem.

yes, the problem is gfortran runtime. 

Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Ondřej Čertík
On Wed, Aug 22, 2012 at 8:50 AM, David Cournapeau  wrote:
> On Wed, Aug 22, 2012 at 4:12 PM, Ondřej Čertík  
> wrote:
>> On Wed, Aug 22, 2012 at 7:35 AM, Travis Oliphant  wrote:
>>> On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:
>>>
 On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  
 wrote:
>
> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>
>
>
> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
> wrote:
>>
>> I'm actually not sure, why.   I think the issue is making sure that the
>> release manager can actually "build" NumPy without having to buy a
>> particular compiler.
>
>
> That would help, yes. MS Express doesn't work under Wine last time I 
> checked
> by the way.
>
> However, the issue is more than just one license. There's a large number 
> of
> packages that depend on numpy and provide binaries. If they can't make 
> those
> compatible with numpy ones, that's a problem. Users will first install 
> numpy
> 64-bit, and then later find out that part of the scientific Python stack
> isn't available to them anymore.
>
>
>
> As far as I understand, you don't *have* to build all downstream
> dependencies with the same compiler that NumPy was built with unless your
> extension relies on the way C-functions pass structures on the stack (not
> pointers to them, but structures as a whole) or if it relies on the
> representation of FILE*.  At one time all structures were passed as
> pointers specifically for this reason.   The FILE* situation is a problem,
> but most extensions don't use NumPy C-API calls that have a FILE* 
> argument.

 It is much more pervasive than that, unfortunately. And for fortran,
 it is much worse, because if we build scipy or numpy with Intel
 Fortran, I think we pretty much force everyone to use intel fortran
 for *any* binary on top of them.
>>>
>>> Can you be more specific?   Does the calling convention for C-routines 
>>> created with Intel Fortran differ so much?
>>
>>
>> I have the same question as Travis. If you are interested about ABI
>> for Fortran, I have created this FAQ:
>>
>> http://fortran90.org/src/faq.html#are-fortran-compilers-abi-compatible
>>
>> Since NumPy only calls the Fortran routines, but does not expose them,
>> then the only issue is how to build NumPy with (let's say) Intel
>> Fortran. That's a separate issue.
>> Once NumPy is built, then nobody cares, because they only need to
>> interface the C routines, if anything at all.
>>
>> As far as Fortran runtime library goes (which of course is different
>> for Intel and gfortran), I am currently not sure whether it is
>> possible to mix them, but I think you probably can, if numpy .so is
>> using Intel, and my own .so is using gfortran.
>>
>>
>> Finally, if NumPy is build using MSVC, does this force everybody to
>> use the same C compiler? I thought that C compilers are ABI
>> compatible, at least Intel C and gfortran C are ABI compatible.  Is
>> MSVC different?
>>
>> Btw, to correctly call Fortran from C, one should always be using the
>> iso_c_binding module, as explained here:
>>
>> http://fortran90.org/src/best-practices.html#interfacing-with-c
>>
>> Then the Fortran code becomes just like any other C library.
>
> It is unfortunately more complicated than that.
>
>  1 regarding fortran runtimes: I have never been able to link a
> gfortran object file with Visual Studio linker (link.exe).

You cannot mix the Fortran object .o files between compilers.
That will never work, because Fortran compilers are not ABI
compatible, see the FAQ.

The only way this could work is if you can mix gcc .o file with MSVC
linker (I don't
know if this is possible or not). If that works,
then you should be able to use iso_c_binding in Fortran to produce
gcc's compatible .o
file and then link it.

Which errors were you getting when linking it? Was it a problem with
libgfortran runtime
(that you of course need to link as well)? This runtime can be a problem.

>  2 mixing runtimes is never a good idea, because it becomes difficult
> to avoid passing a pointer from one runtime to the other. Intel
> fortran compiler obviously knows how to deal with the C runtime of
> Visual Studio, but gfortran doesn't.

By Fortran runtime I mean this library in my Ubuntu:

libgfortran.so.3 => /usr/lib/x86_64-linux-gnu/libgfortran.so.3
(0x7ffaa9ce9000)

Here
are all the libraries in my typical gfortran program:

linux-vdso.so.1 =>  (0x7e9ff000)
libgfortran.so.3 => /usr/lib/x86_64-linux-gnu/libgfortran.so.3
(0x7ffaa9ce9000)
libm.so.6 => /lib/x86_64-linux-gnu/libm.so.6 (0x7ffaa99ef000)
libgcc_s.so.1 => /lib/x86_64-linux-gnu/libgcc_s.so.1 
(0x7ffaa97d8000)
libquadmath.so.0 => /usr/lib/x86_64-linux-gnu/libquadmath.so.0
(0x7ffaa95a2000)
libc.so.6 => /lib/x86_64-linux-gnu/libc.so.6 (0x00

Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 4:12 PM, Ondřej Čertík  wrote:
> On Wed, Aug 22, 2012 at 7:35 AM, Travis Oliphant  wrote:
>> On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:
>>
>>> On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  
>>> wrote:

 On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:



 On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
 wrote:
>
> I'm actually not sure, why.   I think the issue is making sure that the
> release manager can actually "build" NumPy without having to buy a
> particular compiler.


 That would help, yes. MS Express doesn't work under Wine last time I 
 checked
 by the way.

 However, the issue is more than just one license. There's a large number of
 packages that depend on numpy and provide binaries. If they can't make 
 those
 compatible with numpy ones, that's a problem. Users will first install 
 numpy
 64-bit, and then later find out that part of the scientific Python stack
 isn't available to them anymore.



 As far as I understand, you don't *have* to build all downstream
 dependencies with the same compiler that NumPy was built with unless your
 extension relies on the way C-functions pass structures on the stack (not
 pointers to them, but structures as a whole) or if it relies on the
 representation of FILE*.  At one time all structures were passed as
 pointers specifically for this reason.   The FILE* situation is a problem,
 but most extensions don't use NumPy C-API calls that have a FILE* argument.
>>>
>>> It is much more pervasive than that, unfortunately. And for fortran,
>>> it is much worse, because if we build scipy or numpy with Intel
>>> Fortran, I think we pretty much force everyone to use intel fortran
>>> for *any* binary on top of them.
>>
>> Can you be more specific?   Does the calling convention for C-routines 
>> created with Intel Fortran differ so much?
>
>
> I have the same question as Travis. If you are interested about ABI
> for Fortran, I have created this FAQ:
>
> http://fortran90.org/src/faq.html#are-fortran-compilers-abi-compatible
>
> Since NumPy only calls the Fortran routines, but does not expose them,
> then the only issue is how to build NumPy with (let's say) Intel
> Fortran. That's a separate issue.
> Once NumPy is built, then nobody cares, because they only need to
> interface the C routines, if anything at all.
>
> As far as Fortran runtime library goes (which of course is different
> for Intel and gfortran), I am currently not sure whether it is
> possible to mix them, but I think you probably can, if numpy .so is
> using Intel, and my own .so is using gfortran.
>
>
> Finally, if NumPy is build using MSVC, does this force everybody to
> use the same C compiler? I thought that C compilers are ABI
> compatible, at least Intel C and gfortran C are ABI compatible.  Is
> MSVC different?
>
> Btw, to correctly call Fortran from C, one should always be using the
> iso_c_binding module, as explained here:
>
> http://fortran90.org/src/best-practices.html#interfacing-with-c
>
> Then the Fortran code becomes just like any other C library.

It is unfortunately more complicated than that.

 1 regarding fortran runtimes: I have never been able to link a
gfortran object file with Visual Studio linker (link.exe).
 2 mixing runtimes is never a good idea, because it becomes difficult
to avoid passing a pointer from one runtime to the other. Intel
fortran compiler obviously knows how to deal with the C runtime of
Visual Studio, but gfortran doesn't.
 3 gcc and visual studio are ABI compatible in a (very) restricted
sense: they share the same calling convention at least in C, but
that's pretty much it. Because having multiple copies of a runtime is
so common on windows, you cannot easily pass objects between dlls.
Travis mentioned FILE*, but that's also true for pointers returned by
malloc, file descriptors, etc... See this for example:
http://stackoverflow.com/questions/1052491/c-runtime-objects-dll-boundaries

Because of 1, if we have a binary with intel + visual studio, we are
effectively forcing everyone on windows to use intel fortran
compilers. I would rather have the official binaries using open source
toolchains.

cheers,

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Ondřej Čertík
On Wed, Aug 22, 2012 at 7:35 AM, Travis Oliphant  wrote:
> On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:
>
>> On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  wrote:
>>>
>>> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>>>
>>>
>>>
>>> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
>>> wrote:

 I'm actually not sure, why.   I think the issue is making sure that the
 release manager can actually "build" NumPy without having to buy a
 particular compiler.
>>>
>>>
>>> That would help, yes. MS Express doesn't work under Wine last time I checked
>>> by the way.
>>>
>>> However, the issue is more than just one license. There's a large number of
>>> packages that depend on numpy and provide binaries. If they can't make those
>>> compatible with numpy ones, that's a problem. Users will first install numpy
>>> 64-bit, and then later find out that part of the scientific Python stack
>>> isn't available to them anymore.
>>>
>>>
>>>
>>> As far as I understand, you don't *have* to build all downstream
>>> dependencies with the same compiler that NumPy was built with unless your
>>> extension relies on the way C-functions pass structures on the stack (not
>>> pointers to them, but structures as a whole) or if it relies on the
>>> representation of FILE*.  At one time all structures were passed as
>>> pointers specifically for this reason.   The FILE* situation is a problem,
>>> but most extensions don't use NumPy C-API calls that have a FILE* argument.
>>
>> It is much more pervasive than that, unfortunately. And for fortran,
>> it is much worse, because if we build scipy or numpy with Intel
>> Fortran, I think we pretty much force everyone to use intel fortran
>> for *any* binary on top of them.
>
> Can you be more specific?   Does the calling convention for C-routines 
> created with Intel Fortran differ so much?


I have the same question as Travis. If you are interested about ABI
for Fortran, I have created this FAQ:

http://fortran90.org/src/faq.html#are-fortran-compilers-abi-compatible

Since NumPy only calls the Fortran routines, but does not expose them,
then the only issue is how to build NumPy with (let's say) Intel
Fortran. That's a separate issue.
Once NumPy is built, then nobody cares, because they only need to
interface the C routines, if anything at all.

As far as Fortran runtime library goes (which of course is different
for Intel and gfortran), I am currently not sure whether it is
possible to mix them, but I think you probably can, if numpy .so is
using Intel, and my own .so is using gfortran.


Finally, if NumPy is build using MSVC, does this force everybody to
use the same C compiler? I thought that C compilers are ABI
compatible, at least Intel C and gfortran C are ABI compatible.  Is
MSVC different?

Btw, to correctly call Fortran from C, one should always be using the
iso_c_binding module, as explained here:

http://fortran90.org/src/best-practices.html#interfacing-with-c

Then the Fortran code becomes just like any other C library.

Ondrej
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 3:35 PM, Travis Oliphant  wrote:
> On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:
>
>> On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  wrote:
>>>
>>> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>>>
>>>
>>>
>>> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
>>> wrote:

 I'm actually not sure, why.   I think the issue is making sure that the
 release manager can actually "build" NumPy without having to buy a
 particular compiler.
>>>
>>>
>>> That would help, yes. MS Express doesn't work under Wine last time I checked
>>> by the way.
>>>
>>> However, the issue is more than just one license. There's a large number of
>>> packages that depend on numpy and provide binaries. If they can't make those
>>> compatible with numpy ones, that's a problem. Users will first install numpy
>>> 64-bit, and then later find out that part of the scientific Python stack
>>> isn't available to them anymore.
>>>
>>>
>>>
>>> As far as I understand, you don't *have* to build all downstream
>>> dependencies with the same compiler that NumPy was built with unless your
>>> extension relies on the way C-functions pass structures on the stack (not
>>> pointers to them, but structures as a whole) or if it relies on the
>>> representation of FILE*.  At one time all structures were passed as
>>> pointers specifically for this reason.   The FILE* situation is a problem,
>>> but most extensions don't use NumPy C-API calls that have a FILE* argument.
>>
>> It is much more pervasive than that, unfortunately. And for fortran,
>> it is much worse, because if we build scipy or numpy with Intel
>> Fortran, I think we pretty much force everyone to use intel fortran
>> for *any* binary on top of them.
>
> Can you be more specific?   Does the calling convention for C-routines 
> created with Intel Fortran differ so much?

If we were to use intel, it would be with MS compilers, and I have
never been able to link a gfortran program with visual studio. I will
try to take a look at it again during euroscipy,

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Travis Oliphant
On Aug 22, 2012, at 9:28 AM, David Cournapeau wrote:

> On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  wrote:
>> 
>> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>> 
>> 
>> 
>> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
>> wrote:
>>> 
>>> I'm actually not sure, why.   I think the issue is making sure that the
>>> release manager can actually "build" NumPy without having to buy a
>>> particular compiler.
>> 
>> 
>> That would help, yes. MS Express doesn't work under Wine last time I checked
>> by the way.
>> 
>> However, the issue is more than just one license. There's a large number of
>> packages that depend on numpy and provide binaries. If they can't make those
>> compatible with numpy ones, that's a problem. Users will first install numpy
>> 64-bit, and then later find out that part of the scientific Python stack
>> isn't available to them anymore.
>> 
>> 
>> 
>> As far as I understand, you don't *have* to build all downstream
>> dependencies with the same compiler that NumPy was built with unless your
>> extension relies on the way C-functions pass structures on the stack (not
>> pointers to them, but structures as a whole) or if it relies on the
>> representation of FILE*.  At one time all structures were passed as
>> pointers specifically for this reason.   The FILE* situation is a problem,
>> but most extensions don't use NumPy C-API calls that have a FILE* argument.
> 
> It is much more pervasive than that, unfortunately. And for fortran,
> it is much worse, because if we build scipy or numpy with Intel
> Fortran, I think we pretty much force everyone to use intel fortran
> for *any* binary on top of them.

Can you be more specific?   Does the calling convention for C-routines created 
with Intel Fortran differ so much? 

-Travis


> 
> David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 3:25 PM, Travis Oliphant  wrote:
>
> On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:
>
>
>
> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant 
> wrote:
>>
>> I'm actually not sure, why.   I think the issue is making sure that the
>> release manager can actually "build" NumPy without having to buy a
>> particular compiler.
>
>
> That would help, yes. MS Express doesn't work under Wine last time I checked
> by the way.
>
> However, the issue is more than just one license. There's a large number of
> packages that depend on numpy and provide binaries. If they can't make those
> compatible with numpy ones, that's a problem. Users will first install numpy
> 64-bit, and then later find out that part of the scientific Python stack
> isn't available to them anymore.
>
>
>
> As far as I understand, you don't *have* to build all downstream
> dependencies with the same compiler that NumPy was built with unless your
> extension relies on the way C-functions pass structures on the stack (not
> pointers to them, but structures as a whole) or if it relies on the
> representation of FILE*.  At one time all structures were passed as
> pointers specifically for this reason.   The FILE* situation is a problem,
> but most extensions don't use NumPy C-API calls that have a FILE* argument.

It is much more pervasive than that, unfortunately. And for fortran,
it is much worse, because if we build scipy or numpy with Intel
Fortran, I think we pretty much force everyone to use intel fortran
for *any* binary on top of them.

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Travis Oliphant

On Aug 22, 2012, at 3:59 AM, Ralf Gommers wrote:

> 
> 
> On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant  wrote:
> I'm actually not sure, why.   I think the issue is making sure that the 
> release manager can actually "build" NumPy without having to buy a particular 
> compiler.
> 
> That would help, yes. MS Express doesn't work under Wine last time I checked 
> by the way. 
> 
> However, the issue is more than just one license. There's a large number of 
> packages that depend on numpy and provide binaries. If they can't make those 
> compatible with numpy ones, that's a problem. Users will first install numpy 
> 64-bit, and then later find out that part of the scientific Python stack 
> isn't available to them anymore.
>  

As far as I understand, you don't *have* to build all downstream dependencies 
with the same compiler that NumPy was built with unless your extension relies 
on the way C-functions pass structures on the stack (not pointers to them, but 
structures as a whole) or if it relies on the representation of FILE*.  At 
one time all structures were passed as pointers specifically for this reason.   
The FILE* situation is a problem, but most extensions don't use NumPy C-API 
calls that have a FILE* argument. 

> 
> But, I would rather have official builds of NumPy for all platforms with a 
> compiler paid for by a NumPy-sponsor than not have them.
> 
> I would only want to have those if I can have the whole stack. If that's 
> possible, then (if Christoph is okay with it) why not upload Christoph's 
> binaries also to SF and call them "official" then? I don't see the point in 
> duplicating his efforts.
> 

Yes, I agree.   I would really like there to be several build machines, 
maintained by the community (NumFOCUS could sponsor this) which can be used to 
build windows binaries from a build specification.   I think bento is a good 
tool.   We could accelerate its use by offering machines that automatically 
build binaries for packages with bento scripts.

If someone is interested in doing a project like this for the community, let me 
know as there are funds available to sponsor it --- just the lack of someone to 
see it through.  

-Travis


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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 3:14 PM, Nathaniel Smith  wrote:
> On Wed, Aug 22, 2012 at 11:40 AM, David Cournapeau  wrote:
>> On Tue, Aug 21, 2012 at 12:15 AM, Chris Barker  wrote:
>>> On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  
>>> wrote:
 I'm actually not sure, why.   I think the issue is making sure that the 
 release manager can actually "build" NumPy without having to buy a 
 particular compiler.
>>>
>>> The MS Express editions, while not open source, are free-to-use, and work 
>>> fine.
>>>
>>> Not sure what what do about Fortran, though, but that's a scipy, not a
>>> numpy issue, yes?
>>
>> fortran is the issue. Having one or two licenses of say Intel Fortran
>> compiler is not enough because it makes it difficult for people to
>> build on top of scipy.
>
> There seems to be a 64-bit version of mingw -- I assume this runs into
> the same issue that numpy has with new versions of 32-bit mingw? Would
> it work if that issue were fixed?

It does have the same issue IIRC, but there was also the issue that
scipy built with mingw-w64 did not work at all at that time. Could be
different today, I have not looked into it for quite a while now.

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Nathaniel Smith
On Wed, Aug 22, 2012 at 11:40 AM, David Cournapeau  wrote:
> On Tue, Aug 21, 2012 at 12:15 AM, Chris Barker  wrote:
>> On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  wrote:
>>> I'm actually not sure, why.   I think the issue is making sure that the 
>>> release manager can actually "build" NumPy without having to buy a 
>>> particular compiler.
>>
>> The MS Express editions, while not open source, are free-to-use, and work 
>> fine.
>>
>> Not sure what what do about Fortran, though, but that's a scipy, not a
>> numpy issue, yes?
>
> fortran is the issue. Having one or two licenses of say Intel Fortran
> compiler is not enough because it makes it difficult for people to
> build on top of scipy.

There seems to be a 64-bit version of mingw -- I assume this runs into
the same issue that numpy has with new versions of 32-bit mingw? Would
it work if that issue were fixed?

-n
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Wed, Aug 22, 2012 at 12:17 PM, Peter
 wrote:
> On Wed, Aug 22, 2012 at 11:40 AM, David Cournapeau  wrote:
>> On Tue, Aug 21, 2012 at 12:15 AM, Chris Barker  wrote:
>>> On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  
>>> wrote:
 I'm actually not sure, why.   I think the issue is making sure that
 the release manager can actually "build" NumPy without having
 to buy a particular compiler.
>>>
>>> The MS Express editions, while not open source, are free-to-use,
>>> and work fine.
>>>
>>> Not sure what what do about Fortran, though, but that's a scipy, not a
>>> numpy issue, yes?
>>
>> fortran is the issue. Having one or two licenses of say Intel Fortran
>> compiler is not enough because it makes it difficult for people to
>> build on top of scipy.
>>
>> David
>
> For those users/developers/packages using NumPy but not SciPy,
> does this matter? Having just official NumPy 64bit Windows packages
> would still be very welcome.
>
> Is the problem that whatever route NumPy goes down will have
> potential implications/restrictions for how SciPy could proceed?

Yes.

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Peter
On Wed, Aug 22, 2012 at 11:40 AM, David Cournapeau  wrote:
> On Tue, Aug 21, 2012 at 12:15 AM, Chris Barker  wrote:
>> On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  wrote:
>>> I'm actually not sure, why.   I think the issue is making sure that
>>> the release manager can actually "build" NumPy without having
>>> to buy a particular compiler.
>>
>> The MS Express editions, while not open source, are free-to-use,
>> and work fine.
>>
>> Not sure what what do about Fortran, though, but that's a scipy, not a
>> numpy issue, yes?
>
> fortran is the issue. Having one or two licenses of say Intel Fortran
> compiler is not enough because it makes it difficult for people to
> build on top of scipy.
>
> David

For those users/developers/packages using NumPy but not SciPy,
does this matter? Having just official NumPy 64bit Windows packages
would still be very welcome.

Is the problem that whatever route NumPy goes down will have
potential implications/restrictions for how SciPy could proceed?

Peter
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread David Cournapeau
On Tue, Aug 21, 2012 at 12:15 AM, Chris Barker  wrote:
> On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  wrote:
>> I'm actually not sure, why.   I think the issue is making sure that the 
>> release manager can actually "build" NumPy without having to buy a 
>> particular compiler.
>
> The MS Express editions, while not open source, are free-to-use, and work 
> fine.
>
> Not sure what what do about Fortran, though, but that's a scipy, not a
> numpy issue, yes?

fortran is the issue. Having one or two licenses of say Intel Fortran
compiler is not enough because it makes it difficult for people to
build on top of scipy.

David
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-22 Thread Ralf Gommers
On Tue, Aug 21, 2012 at 12:51 AM, Travis Oliphant wrote:

> I'm actually not sure, why.   I think the issue is making sure that the
> release manager can actually "build" NumPy without having to buy a
> particular compiler.
>

That would help, yes. MS Express doesn't work under Wine last time I
checked by the way.

However, the issue is more than just one license. There's a large number of
packages that depend on numpy and provide binaries. If they can't make
those compatible with numpy ones, that's a problem. Users will first
install numpy 64-bit, and then later find out that part of the scientific
Python stack isn't available to them anymore.


>
> But, I would rather have official builds of NumPy for all platforms with a
> compiler paid for by a NumPy-sponsor than not have them.
>

I would only want to have those if I can have the whole stack. If that's
possible, then (if Christoph is okay with it) why not upload Christoph's
binaries also to SF and call them "official" then? I don't see the point in
duplicating his efforts.

Ralf


> -Travis
>
>
>
> On Aug 20, 2012, at 5:28 PM, Chris Barker wrote:
>
> > On Sun, Aug 19, 2012 at 11:39 AM, Ralf Gommers > The problem is that,
> > unlike 32-bit builds, they can't be made with open
> >> source compilers on Windows. So unless we're okay with that,
> >
> > Why does it have to be built with open-source compilers? we're
> > building against the python.org python, yes? Which is built with the
> > MS compiler -- so why the insistance on open-source?
> >
> > -Chris
> >
> >
> >
> > --
> >
> > Christopher Barker, Ph.D.
> > Oceanographer
> >
> > Emergency Response Division
> > NOAA/NOS/OR&R(206) 526-6959   voice
> > 7600 Sand Point Way NE   (206) 526-6329   fax
> > Seattle, WA  98115   (206) 526-6317   main reception
> >
> > chris.bar...@noaa.gov
> > ___
> > NumPy-Discussion mailing list
> > NumPy-Discussion@scipy.org
> > http://mail.scipy.org/mailman/listinfo/numpy-discussion
>
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-20 Thread Chris Barker
On Mon, Aug 20, 2012 at 3:51 PM, Travis Oliphant  wrote:
> I'm actually not sure, why.   I think the issue is making sure that the 
> release manager can actually "build" NumPy without having to buy a particular 
> compiler.

The MS Express editions, while not open source, are free-to-use, and work fine.

Not sure what what do about Fortran, though, but that's a scipy, not a
numpy issue, yes?

-Chris




> But, I would rather have official builds of NumPy for all platforms with a 
> compiler paid for by a NumPy-sponsor than not have them.
>
> -Travis
>
>
>
> On Aug 20, 2012, at 5:28 PM, Chris Barker wrote:
>
>> On Sun, Aug 19, 2012 at 11:39 AM, Ralf Gommers > The problem is that,
>> unlike 32-bit builds, they can't be made with open
>>> source compilers on Windows. So unless we're okay with that,
>>
>> Why does it have to be built with open-source compilers? we're
>> building against the python.org python, yes? Which is built with the
>> MS compiler -- so why the insistance on open-source?
>>
>> -Chris
>>
>>
>>
>> --
>>
>> Christopher Barker, Ph.D.
>> Oceanographer
>>
>> Emergency Response Division
>> NOAA/NOS/OR&R(206) 526-6959   voice
>> 7600 Sand Point Way NE   (206) 526-6329   fax
>> Seattle, WA  98115   (206) 526-6317   main reception
>>
>> chris.bar...@noaa.gov
>> ___
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>
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-- 

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Oceanographer

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Re: [Numpy-discussion] 64bit infrastructure

2012-08-20 Thread Travis Oliphant
I'm actually not sure, why.   I think the issue is making sure that the release 
manager can actually "build" NumPy without having to buy a particular compiler. 
 

But, I would rather have official builds of NumPy for all platforms with a 
compiler paid for by a NumPy-sponsor than not have them.

-Travis



On Aug 20, 2012, at 5:28 PM, Chris Barker wrote:

> On Sun, Aug 19, 2012 at 11:39 AM, Ralf Gommers > The problem is that,
> unlike 32-bit builds, they can't be made with open
>> source compilers on Windows. So unless we're okay with that,
> 
> Why does it have to be built with open-source compilers? we're
> building against the python.org python, yes? Which is built with the
> MS compiler -- so why the insistance on open-source?
> 
> -Chris
> 
> 
> 
> -- 
> 
> Christopher Barker, Ph.D.
> Oceanographer
> 
> Emergency Response Division
> NOAA/NOS/OR&R(206) 526-6959   voice
> 7600 Sand Point Way NE   (206) 526-6329   fax
> Seattle, WA  98115   (206) 526-6317   main reception
> 
> chris.bar...@noaa.gov
> ___
> NumPy-Discussion mailing list
> NumPy-Discussion@scipy.org
> http://mail.scipy.org/mailman/listinfo/numpy-discussion

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Re: [Numpy-discussion] 64bit infrastructure

2012-08-20 Thread Chris Barker
On Sun, Aug 19, 2012 at 11:39 AM, Ralf Gommers > The problem is that,
unlike 32-bit builds, they can't be made with open
> source compilers on Windows. So unless we're okay with that,

Why does it have to be built with open-source compilers? we're
building against the python.org python, yes? Which is built with the
MS compiler -- so why the insistance on open-source?

-Chris



-- 

Christopher Barker, Ph.D.
Oceanographer

Emergency Response Division
NOAA/NOS/OR&R(206) 526-6959   voice
7600 Sand Point Way NE   (206) 526-6329   fax
Seattle, WA  98115   (206) 526-6317   main reception

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Re: [Numpy-discussion] 64bit infrastructure

2012-08-19 Thread Ralf Gommers
On Sun, Aug 19, 2012 at 9:14 AM, Sayth Renshaw wrote:

> > Message: 4
> > Date: Fri, 17 Aug 2012 15:25:21 -0700
> > From: Matthew Brett 
> > Subject: Re: [Numpy-discussion] 64bit infrastructure
> > To: Discussion of Numerical Python 
> > Message-ID:
> >  w...@mail.gmail.com>
> > Content-Type: text/plain; charset=ISO-8859-1
> >
> > Hi,
> >
> > On Fri, Aug 17, 2012 at 2:25 PM, Sayth Renshaw 
> wrote:
> >>>
> >>> Hi Sayth,
> >>>
> >>> On Thu, Aug 16, 2012 at 8:51 PM, Sayth Renshaw 
> wrote:
> >>>> Hi
> >>>>
> >>>> I was just wondering if the current absence of 64bit builds was as a
> result
> >>>> of an infrastructure or funding concern.
> >>>>
> >>>> I like many now have only 64 bit systems and am using the unofficial
> builds.
> >>>>
> >>>> If it was something we could raise funds to resolve, how much? Or is
> it more
> >>>> complex than that?
> >>>
> >>> Which platform, windows?
> >>>
> >>> Ondrej
> >>>
> >>>
> >>
> >> Yes I have a Windows 7 64Bit install and a ubuntu 64 Bit install.
> >
> > Isn't the numpy ubuntu install 64 bit by default?
> >
> > You may have seen that there are numpy and scipy 64-bit windows
> installers here:
> >
> > http://www.lfd.uci.edu/~gohlke/pythonlibs/
> >
> > Do they work for you?
> >
> > Best,
> >
> > Matthew
> >
> >
> > --
> >
>
> Thanks Matthew
>
> yeah that's the one I am currently using and it is working ok but just
> thought if there was a way to help 64bit builds become official then I
> would ask.
>

The problem is that, unlike 32-bit builds, they can't be made with open
source compilers on Windows. So unless we're okay with that, we stay with
the current situation. Fortunately Christoph Golhke's unofficial binaries
are excellent.

Ralf
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-19 Thread Sayth Renshaw
> Message: 4
> Date: Fri, 17 Aug 2012 15:25:21 -0700
> From: Matthew Brett 
> Subject: Re: [Numpy-discussion] 64bit infrastructure
> To: Discussion of Numerical Python 
> Message-ID:
> 
> Content-Type: text/plain; charset=ISO-8859-1
>
> Hi,
>
> On Fri, Aug 17, 2012 at 2:25 PM, Sayth Renshaw  wrote:
>>>
>>> Hi Sayth,
>>>
>>> On Thu, Aug 16, 2012 at 8:51 PM, Sayth Renshaw  
>>> wrote:
>>>> Hi
>>>>
>>>> I was just wondering if the current absence of 64bit builds was as a result
>>>> of an infrastructure or funding concern.
>>>>
>>>> I like many now have only 64 bit systems and am using the unofficial 
>>>> builds.
>>>>
>>>> If it was something we could raise funds to resolve, how much? Or is it 
>>>> more
>>>> complex than that?
>>>
>>> Which platform, windows?
>>>
>>> Ondrej
>>>
>>>
>>
>> Yes I have a Windows 7 64Bit install and a ubuntu 64 Bit install.
>
> Isn't the numpy ubuntu install 64 bit by default?
>
> You may have seen that there are numpy and scipy 64-bit windows installers 
> here:
>
> http://www.lfd.uci.edu/~gohlke/pythonlibs/
>
> Do they work for you?
>
> Best,
>
> Matthew
>
>
> --
>

Thanks Matthew

yeah that's the one I am currently using and it is working ok but just
thought if there was a way to help 64bit builds become official then I
would ask.

Sayth
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-17 Thread Matthew Brett
Hi,

On Fri, Aug 17, 2012 at 2:25 PM, Sayth Renshaw  wrote:
>>
>> Hi Sayth,
>>
>> On Thu, Aug 16, 2012 at 8:51 PM, Sayth Renshaw  
>> wrote:
>>> Hi
>>>
>>> I was just wondering if the current absence of 64bit builds was as a result
>>> of an infrastructure or funding concern.
>>>
>>> I like many now have only 64 bit systems and am using the unofficial builds.
>>>
>>> If it was something we could raise funds to resolve, how much? Or is it more
>>> complex than that?
>>
>> Which platform, windows?
>>
>> Ondrej
>>
>>
>
> Yes I have a Windows 7 64Bit install and a ubuntu 64 Bit install.

Isn't the numpy ubuntu install 64 bit by default?

You may have seen that there are numpy and scipy 64-bit windows installers here:

http://www.lfd.uci.edu/~gohlke/pythonlibs/

Do they work for you?

Best,

Matthew
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-17 Thread Travis Oliphant
Donations to NumFOCUS would be helpful in raising money to fund the creation of 
64-bit installers.It always comes down to funding, but mostly people's time 
is the scarce resource here.

It is more difficult to build 64-bit binaries on Windows which is the real 
issue (not the availability of 64-bit Windows machines -- although the right 
person having access to those machines can be a problem).   

NumFOCUS would gladly donate long-running EC2 instances running Windows 64-bit 
windows if there are people who just need access to a machine. 

-Travis


On Aug 16, 2012, at 10:51 PM, Sayth Renshaw wrote:

> Hi
> 
> I was just wondering if the current absence of 64bit builds was as a result 
> of an infrastructure or funding concern.
> 
> I like many now have only 64 bit systems and am using the unofficial builds.
> 
> If it was something we could raise funds to resolve, how much? Or is it more 
> complex than that?
> 
> Sayth
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-17 Thread Sayth Renshaw
>
> Hi Sayth,
>
> On Thu, Aug 16, 2012 at 8:51 PM, Sayth Renshaw  wrote:
>> Hi
>>
>> I was just wondering if the current absence of 64bit builds was as a result
>> of an infrastructure or funding concern.
>>
>> I like many now have only 64 bit systems and am using the unofficial builds.
>>
>> If it was something we could raise funds to resolve, how much? Or is it more
>> complex than that?
>
> Which platform, windows?
>
> Ondrej
>
>

Yes I have a Windows 7 64Bit install and a ubuntu 64 Bit install.

Sayth
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Re: [Numpy-discussion] 64bit infrastructure

2012-08-17 Thread Ondřej Čertík
Hi Sayth,

On Thu, Aug 16, 2012 at 8:51 PM, Sayth Renshaw  wrote:
> Hi
>
> I was just wondering if the current absence of 64bit builds was as a result
> of an infrastructure or funding concern.
>
> I like many now have only 64 bit systems and am using the unofficial builds.
>
> If it was something we could raise funds to resolve, how much? Or is it more
> complex than that?

Which platform, windows?

Ondrej
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[Numpy-discussion] 64bit infrastructure

2012-08-16 Thread Sayth Renshaw
Hi

I was just wondering if the current absence of 64bit builds was as a result
of an infrastructure or funding concern.

I like many now have only 64 bit systems and am using the unofficial builds.

If it was something we could raise funds to resolve, how much? Or is it
more complex than that?

Sayth
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