[sage-release] Re: Sage 9.3.beta7 released
https://trac.sagemath.org/ticket/31621 tracks this issue. On Wednesday, September 22, 2021 at 11:51:11 AM UTC-7 John H Palmieri wrote: > Sorry to resurrect this old thread, but I'm seeing the same numerical > doctest failures on an OS X machine with Sage 9.5.beta1. Any ideas where > these could be coming from? Some miscompiled component coming from the > system, or something from within Sage itself? I started seeing these after > upgrading to OS X 11.5.2 (it was on 10.?? before). I tried reinstalling all > of homebrew's packages, and that didn't help. > > > > > > On Sunday, February 7, 2021 at 5:12:40 PM UTC-8 matthia...@gmail.com > wrote: > >> On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: >> > As always, you can get the latest beta version from the "develop" git >>> branch. Alternatively, the self-contained source tarball is at >>> http://www.sagemath.org/download-latest.html >>> >> 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to >>> 9.3.beta7 >>> >>> >> First test results from >> https://github.com/sagemath/sage/actions/runs/545994902: >> >> ubuntu-bionic-standard: (python 3.6) still >> https://trac.sagemath.org/ticket/31191 >> >> debian-bullseye-standard: New(?) numerics issues: >> sage -t --random-seed=0 src/sage/finance/time_series.pyx # 8 doctests >> failed >> sage -t --random-seed=0 src/sage/geometry/polyhedron/library.py # 1 >> doctest failed >> sage -t --random-seed=0 src/sage/geometry/polyhedron/base.py # 1 doctest >> failed >> sage -t --random-seed=0 src/sage/matrix/matrix_double_dense.pyx # 2 >> doctests failed >> sage -t --random-seed=0 src/sage/matrix/matrix_integer_dense.pyx # 1 >> doctest failed >> sage -t --random-seed=0 src/sage/numerical/sdp.pyx # 2 doctests failed >> sage -t --random-seed=0 >> src/sage/tests/books/computational-mathematics-with-sagemath/float_doctest.py >> >> # 1 doctest failed >> >> >> >> >> >> >> > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/e8f2974e-3b4a-4754-b505-da15893eda14n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
Sorry to resurrect this old thread, but I'm seeing the same numerical doctest failures on an OS X machine with Sage 9.5.beta1. Any ideas where these could be coming from? Some miscompiled component coming from the system, or something from within Sage itself? I started seeing these after upgrading to OS X 11.5.2 (it was on 10.?? before). I tried reinstalling all of homebrew's packages, and that didn't help. On Sunday, February 7, 2021 at 5:12:40 PM UTC-8 matthia...@gmail.com wrote: > On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > >> As always, you can get the latest beta version from the "develop" git >> branch. Alternatively, the self-contained source tarball is at >> http://www.sagemath.org/download-latest.html >> >> 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to >> 9.3.beta7 >> >> > First test results from > https://github.com/sagemath/sage/actions/runs/545994902: > > ubuntu-bionic-standard: (python 3.6) still > https://trac.sagemath.org/ticket/31191 > > debian-bullseye-standard: New(?) numerics issues: > sage -t --random-seed=0 src/sage/finance/time_series.pyx # 8 doctests > failed > sage -t --random-seed=0 src/sage/geometry/polyhedron/library.py # 1 > doctest failed > sage -t --random-seed=0 src/sage/geometry/polyhedron/base.py # 1 doctest > failed > sage -t --random-seed=0 src/sage/matrix/matrix_double_dense.pyx # 2 > doctests failed > sage -t --random-seed=0 src/sage/matrix/matrix_integer_dense.pyx # 1 > doctest failed > sage -t --random-seed=0 src/sage/numerical/sdp.pyx # 2 doctests failed > sage -t --random-seed=0 > src/sage/tests/books/computational-mathematics-with-sagemath/float_doctest.py > > # 1 doctest failed > > > > > > > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/c5864c79-ca4f-4fbf-a597-357eb833b88en%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
On Tuesday, February 9, 2021 at 9:41:54 PM UTC-8 Matthias Köppe wrote: > The runs on GH Actions show a very strange failure on fedora-34 and > archlinux-latest (https://github.com/sagemath/sage/runs/1850248457): > > + ./bootstrap > > ./sage: no Sage installation found in $SAGE_ROOT=/sage > > This can be reproduced locally using "tox -e docker-fedora-34-standard". > > > It turns out that the built-in command "test" of bash is broken: > > [root@9d0e0458cde5 sage]# test -r VERSION.txt && echo yes > > Compare with /usr/bin/test > > [root@9d0e0458cde5 sage]# /usr/bin/test -r VERSION.txt && echo yes > yes > Also on ubuntu-hirsute-standard. This appears to be a problem with recent glibc versions, related to the faccessat2 system call - see for example https://bugzilla.redhat.com/show_bug.cgi?id=1900021 -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/155ed233-d642-4b87-a8e8-a735936d692cn%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
On Thursday, February 11, 2021 at 3:49:44 PM UTC-8 John H Palmieri wrote: > I just noticed something which has been happening for all of the 9.3 beta > releases, maybe before that. In the dochtml.log file, I see the message > > Help file /Applications/usr/share/giac/doc/fr/aide_cas not found > > (This is on OS X.) That's a strange path — there is no /Applications/usr — > so it's not surprising that it's not found. What is producing this message? > The path should be fixed. > > See https://trac.sagemath.org/ticket/29552, https://trac.sagemath.org/ticket/30537 -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/fc38046c-e9fb-44dd-ad31-0e16db922632n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
I just noticed something which has been happening for all of the 9.3 beta releases, maybe before that. In the dochtml.log file, I see the message Help file /Applications/usr/share/giac/doc/fr/aide_cas not found (This is on OS X.) That's a strange path — there is no /Applications/usr — so it's not surprising that it's not found. What is producing this message? The path should be fixed. -- John On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > 6096110e06 Trac #30517: MemoryError in doctesting > combinat/designs/gen_quadrangles_with_spread.pyx > e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 > f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol > d856033dd6 Trac #31144: refresh the file polyhedron/plot.py > eb9bae531a Trac #31143: shorten range(0, *) in combinat folder > 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol > 5a4ad12275 Trac #31138: Document WSL Installation > c8a7960598 Trac #31134: Update setuptools and setuptools_scm > 45e7ada314 Trac #24459: Segfault in matrix_integer_dense > 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic > values > 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog > 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices > bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle > connections > 00cacf3803 Trac #31272: Improve the documentation for tensor() > 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" > mechanism, fix script to work without SAGE_ROOT > 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor > products with non-signed modules > 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product > definition there > 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets > 35ad55518c Trac #31261: Update pplpy to 0.8.6 > d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 > 57211cf752 Trac #31257: quo_rem gives wrong answers for > LaurentPolynomial_mpair > b282cf6d2d Trac #31256: more care for pbori > e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields > 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in > matrices > 09f5b07182 Trac #31239: Add ore_algebra optional package > 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip > system package installs and other steps, add mechanism for a local > interactive shell > 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs > 3925e96e0a Trac #31196: Code Improvements for Mutability module > 01ad25fc3f Trac #31194: Make Class with Mutability compatible with > require_mutable wrapper > 99d4307f61 Trac #31121: Further refactoring of eta products file > 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter > notebook > 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets > 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in > src/bin/sage-location > 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image > 7823deee62 Trac #31263: Broken `sage -b` > f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of > clang conflict with '-march=native' > aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just > python3 > 70291edd23 Trac #14821: Weird error in exponential integral > 583e83e86d Trac #7423: plot3d can't handle log(0) > d7c2285977 Trac #31243: Stronger Categories for Manifold Examples: > Connectedness > 6ef10b86c1 Trac #31240: sage-flatsurf pip package > 513046f42d Trac #31238: Add admcycles as an optional package > a33370064e Trac #31237: Add slabbe as an optional package > 712ca6e170 Trac #31234: multiplication of matrix with zero columns or rows > fails > 8c3804cc20 Trac #31233: Categories for Homset of Manifolds do not meet > e1bd5e3fe5 Trac #31229: more typing annotations in Tamari interval posets > 02d0fc8821 Trac #31226: Generalize face iterator of combinatorial > polyhedron to locally branched lattices > d9745ca3e1 Trac #31224: Add surface-dynamics as a pip package > 8101d78056 Trac #31221: Alllow arbitrary folder as output directory of > docbuild > 96bac10d15 Trac #31220: Remove test for safe directory while doctesting > 7eebf61583 Trac #31219: Fix escape of docstring for derivative method > a704ef5b17 Trac #31215: Documentation of Item Assignment Behavior for > Bundle Connections > c4f0516700 Trac #31212: fix submonoid method when the generating set > include the identity > bf9205aebc Trac #31210: Make it possible to run github workflows manually > 5477ab510c Trac #31208: Use popcnt and tzcnt to speed up bitsets on Intel > and AMD > 7edddbd058 Trac #31207
[sage-release] Re: Sage 9.3.beta7 released
On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > The runs on GH Actions show a very strange failure on fedora-34 and archlinux-latest (https://github.com/sagemath/sage/runs/1850248457): + ./bootstrap rm -rf config configure build/make/Makefile-auto.in rm -f src/doc/en/installation/*.txt rm -rf src/doc/en/reference/spkg/*.rst rm -f src/doc/en/reference/repl/*.txt rm -f environment.yml rm -f src/environment.yml rm -f environment-optional.yml rm -f src/environment-optional.yml ./sage: no Sage installation found in $SAGE_ROOT=/sage ./sage: no Sage installation found in $SAGE_ROOT=/sage ./sage: no Sage installation found in $SAGE_ROOT=/sage This can be reproduced locally using "tox -e docker-fedora-34-standard". It turns out that the built-in command "test" of bash is broken: [root@9d0e0458cde5 sage]# test -r VERSION.txt && echo yes [root@9d0e0458cde5 sage]# bash --version GNU bash, version 5.1.0(1)-release (x86_64-redhat-linux-gnu) Compare with /usr/bin/test [root@9d0e0458cde5 sage]# /usr/bin/test -r VERSION.txt && echo yes yes -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/cde3a003-2491-49e2-9e8a-a1c80884086bn%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
I've opened https://trac.sagemath.org/ticket/31372 for this. On Tuesday, February 9, 2021 at 11:59:51 AM UTC-8 Matthias Köppe wrote: > [pari_jupyter-1.3.2] gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g > -fwrapv -O3 -Wall -Wno-unused -O2 -g -O2 -g -fPIC > -I/home/sage/sage/local/include/python3.9 -c PARIKernel/io.c -o > build/temp.linux-x86_64-3.9/PARIKernel/io.o > [pari_jupyter-1.3.2] PARIKernel/io.c: In function 'PyInit_io': > [pari_jupyter-1.3.2] PARIKernel/io.c:2905:43: error: 'PyTypeObject' {aka > 'struct _typeobject'} has no member named 'tp_print' > [pari_jupyter-1.3.2]2905 | > __pyx_type_10PARIKernel_2io_PARIKernelIO.tp_print = 0; > > this comes from the Python 3.9 upgrade. > > > On Tuesday, February 9, 2021 at 11:57:40 AM UTC-8 Matthias Köppe wrote: > >> On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com >> wrote: >> >>> This release breaks (again) our automated docker build on gitlab : >>> >>> see https://gitlab.com/sagemath/sage/-/pipelines >>> >>> >> From the log: >> >> Error building Sage. >> The following package(s) may have failed to build (not necessarily >> during this run of 'make pari_jupyter'): >> * package: pari_jupyter-1.3.2 >> last build time: Feb 8 16:16 >> log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log >> build directory: >> /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2 >> It is safe to delete any log files and build directories, but they >> >> This is an optional package. >> >> >> > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/9f495fbe-b739-467e-aeff-17d749b48f96n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
[pari_jupyter-1.3.2] gcc -Wno-unused-result -Wsign-compare -DNDEBUG -g -fwrapv -O3 -Wall -Wno-unused -O2 -g -O2 -g -fPIC -I/home/sage/sage/local/include/python3.9 -c PARIKernel/io.c -o build/temp.linux-x86_64-3.9/PARIKernel/io.o [pari_jupyter-1.3.2] PARIKernel/io.c: In function 'PyInit_io': [pari_jupyter-1.3.2] PARIKernel/io.c:2905:43: error: 'PyTypeObject' {aka 'struct _typeobject'} has no member named 'tp_print' [pari_jupyter-1.3.2]2905 | __pyx_type_10PARIKernel_2io_PARIKernelIO.tp_print = 0; this comes from the Python 3.9 upgrade. On Tuesday, February 9, 2021 at 11:57:40 AM UTC-8 Matthias Köppe wrote: > On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com > wrote: > >> This release breaks (again) our automated docker build on gitlab : >> >> see https://gitlab.com/sagemath/sage/-/pipelines >> >> > From the log: > > Error building Sage. > The following package(s) may have failed to build (not necessarily > during this run of 'make pari_jupyter'): > * package: pari_jupyter-1.3.2 > last build time: Feb 8 16:16 > log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log > build directory: > /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2 > It is safe to delete any log files and build directories, but they > > This is an optional package. > > > -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/3eb4b00e-05e0-468d-bdba-d934af7c329dn%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
On Tuesday, February 9, 2021 at 11:38:29 AM UTC-8 fchap...@gmail.com wrote: > This release breaks (again) our automated docker build on gitlab : > > see https://gitlab.com/sagemath/sage/-/pipelines > > >From the log: Error building Sage. The following package(s) may have failed to build (not necessarily during this run of 'make pari_jupyter'): * package: pari_jupyter-1.3.2 last build time: Feb 8 16:16 log file:/home/sage/sage/logs/pkgs/pari_jupyter-1.3.2.log build directory: /home/sage/sage/local/var/tmp/sage/build/pari_jupyter-1.3.2 It is safe to delete any log files and build directories, but they This is an optional package. -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/a86fa608-4ef6-4793-9b45-9e8a8d02e4b5n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
This release breaks (again) our automated docker build on gitlab : see https://gitlab.com/sagemath/sage/-/pipelines Le dimanche 7 février 2021 à 23:04:42 UTC+1, Volker Braun a écrit : > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > 6096110e06 Trac #30517: MemoryError in doctesting > combinat/designs/gen_quadrangles_with_spread.pyx > e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 > f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol > d856033dd6 Trac #31144: refresh the file polyhedron/plot.py > eb9bae531a Trac #31143: shorten range(0, *) in combinat folder > 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol > 5a4ad12275 Trac #31138: Document WSL Installation > c8a7960598 Trac #31134: Update setuptools and setuptools_scm > 45e7ada314 Trac #24459: Segfault in matrix_integer_dense > 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic > values > 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog > 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices > bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle > connections > 00cacf3803 Trac #31272: Improve the documentation for tensor() > 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" > mechanism, fix script to work without SAGE_ROOT > 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor > products with non-signed modules > 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product > definition there > 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets > 35ad55518c Trac #31261: Update pplpy to 0.8.6 > d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 > 57211cf752 Trac #31257: quo_rem gives wrong answers for > LaurentPolynomial_mpair > b282cf6d2d Trac #31256: more care for pbori > e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields > 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in > matrices > 09f5b07182 Trac #31239: Add ore_algebra optional package > 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip > system package installs and other steps, add mechanism for a local > interactive shell > 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs > 3925e96e0a Trac #31196: Code Improvements for Mutability module > 01ad25fc3f Trac #31194: Make Class with Mutability compatible with > require_mutable wrapper > 99d4307f61 Trac #31121: Further refactoring of eta products file > 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter > notebook > 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets > 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in > src/bin/sage-location > 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image > 7823deee62 Trac #31263: Broken `sage -b` > f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of > clang conflict with '-march=native' > aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just > python3 > 70291edd23 Trac #14821: Weird error in exponential integral > 583e83e86d Trac #7423: plot3d can't handle log(0) > d7c2285977 Trac #31243: Stronger Categories for Manifold Examples: > Connectedness > 6ef10b86c1 Trac #31240: sage-flatsurf pip package > 513046f42d Trac #31238: Add admcycles as an optional package > a33370064e Trac #31237: Add slabbe as an optional package > 712ca6e170 Trac #31234: multiplication of matrix with zero columns or rows > fails > 8c3804cc20 Trac #31233: Categories for Homset of Manifolds do not meet > e1bd5e3fe5 Trac #31229: more typing annotations in Tamari interval posets > 02d0fc8821 Trac #31226: Generalize face iterator of combinatorial > polyhedron to locally branched lattices > d9745ca3e1 Trac #31224: Add surface-dynamics as a pip package > 8101d78056 Trac #31221: Alllow arbitrary folder as output directory of > docbuild > 96bac10d15 Trac #31220: Remove test for safe directory while doctesting > 7eebf61583 Trac #31219: Fix escape of docstring for derivative method > a704ef5b17 Trac #31215: Documentation of Item Assignment Behavior for > Bundle Connections > c4f0516700 Trac #31212: fix submonoid method when the generating set > include the identity > bf9205aebc Trac #31210: Make it possible to run github workflows manually > 5477ab510c Trac #31208: Use popcnt and tzcnt to speed up bitsets on Intel > and AMD > 7edddbd058 Trac #31207: Implement copy for binary matrix > 3994d91f70 Trac #31200: Small improvements to binary matrix > db29ef0dc9 Trac #31195: yet another cleanup for pbori > 3e3dcb7ce8 Trac #31192: Installation manual: Fix documentation of python > prerequisite (sage-bootstrap-python) > 6b14dc7113 Trac #31
[sage-release] Re: Sage 9.3.beta7 released
On Ubuntu 18.04, running tests with various optional/external packages, I get: Using --optional=4ti2,cbc,ccache,cryptominisat,database_jones_numfield,debian,dot2tex,e_antic,external,fricas,glucose,latte_int,libnauty,lidia,lrslib,memlimit,normaliz,notedown,pandoc_attributes,pip,pycosat,pynormaliz,rst2ipynb,sage,sage_numerical_backends_coin,sage_spkg -- sage -t --long --warn-long 72.7 --random-seed=0 src/sage/tests/cmdline.py # 1 doctest failed sage -t --long --warn-long 72.7 --random-seed=0 src/sage/geometry/cone.py # 2 doctests failed -- External software detected for doctesting: ffmpeg,graphviz,imagemagick,internet,latex,octave,pandoc Rerunning failed tests, I get: -- sage -t --long --warn-long 72.0 --random-seed=0 src/sage/tests/cmdline.py # 1 doctest failed -- External software detected for doctesting: internet,pandoc Failures are copied below: sage -t --long --warn-long 72.0 --random-seed=0 src/sage/tests/cmdline.py ** File "src/sage/tests/cmdline.py", line 606, in sage.tests.cmdline.test_executable Failed example: err # optional - internet Expected: '' Got: '/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/misc/package.py:114: UserWarning: failed to fetch the version of pkg=\'ore_algebra\' at https://pypi.org/pypi/ore_algebra/json\n warnings.warn("failed to fetch the version of pkg={!r} at {}".format(pkg, url))\n' ** 1 item had failures: 1 of 246 in sage.tests.cmdline.test_executable 14 build tests not run 3 gdb tests not run 6 py2 tests not run 6 sagenb tests not run 0 tests not run because we ran out of time [245 tests, 1 failure, 29.78 s] sage -t --long --warn-long 72.7 --random-seed=0 src/sage/geometry/cone.py ** File "src/sage/geometry/cone.py", line 6189, in sage.geometry.cone.? Failed example: K = random_cone(min_ambient_dim=5, min_rays=2, strictly_convex=False) Exception raised: Traceback (most recent call last): File "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py", line 714, in _run self.compile_and_execute(example, compiler, test.globs) File "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/doctest/forker.py", line 1133, in compile_and_execute exec(compiled, globs) File "", line 1, in K = random_cone(min_ambient_dim=Integer(5), min_rays=Integer(2), File "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py", line 6617, in random_cone K = Cone(rays, lattice=L) File "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py", line 462, in Cone return _Cone_from_PPL(cone, lattice, rays) File "/home/slabbe/GitBox/sage/local/lib/python3.8/site-packages/sage/geometry/cone.py", line 500, in _Cone_from_PPL for g in cone.minimized_generators(): File "ppl/polyhedron.pyx", line 335, in ppl.polyhedron.Polyhedron.minimized_generators RuntimeError: Aborted ** File "src/sage/geometry/cone.py", line 6191, in sage.geometry.cone.? Failed example: K.is_strictly_convex() Expected: False Got: True ** 1 item had failures: 2 of 77 in sage.geometry.cone.? 0 tests not run because we ran out of time [1257 tests, 2 failures, 1458.43 s] -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/2049bbf1-bf96-44b1-b0cd-5c2f4fd04797n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
On Debian testing running on core i7 + 16 GB RAM, `ptestlong` gives two permanent failures, both GAP related, both already reported : ``` -- sage -t --long --warn-long 169.5 --random-seed=0 src/sage/tests/gap_packages.py # 1 doctest failed sage -t --long --warn-long 169.5 --random-seed=0 src/sage/groups/abelian_gps/abelian_group_gap.py # 1 doctest failed -- ``` HTH, Le dimanche 7 février 2021 à 23:04:42 UTC+1, Volker Braun a écrit : > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > 6096110e06 Trac #30517: MemoryError in doctesting > combinat/designs/gen_quadrangles_with_spread.pyx > e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 > f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol > d856033dd6 Trac #31144: refresh the file polyhedron/plot.py > eb9bae531a Trac #31143: shorten range(0, *) in combinat folder > 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol > 5a4ad12275 Trac #31138: Document WSL Installation > c8a7960598 Trac #31134: Update setuptools and setuptools_scm > 45e7ada314 Trac #24459: Segfault in matrix_integer_dense > 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic > values > 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog > 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices > bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle > connections > 00cacf3803 Trac #31272: Improve the documentation for tensor() > 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" > mechanism, fix script to work without SAGE_ROOT > 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor > products with non-signed modules > 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product > definition there > 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets > 35ad55518c Trac #31261: Update pplpy to 0.8.6 > d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 > 57211cf752 Trac #31257: quo_rem gives wrong answers for > LaurentPolynomial_mpair > b282cf6d2d Trac #31256: more care for pbori > e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields > 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in > matrices > 09f5b07182 Trac #31239: Add ore_algebra optional package > 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip > system package installs and other steps, add mechanism for a local > interactive shell > 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs > 3925e96e0a Trac #31196: Code Improvements for Mutability module > 01ad25fc3f Trac #31194: Make Class with Mutability compatible with > require_mutable wrapper > 99d4307f61 Trac #31121: Further refactoring of eta products file > 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter > notebook > 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets > 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in > src/bin/sage-location > 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image > 7823deee62 Trac #31263: Broken `sage -b` > f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of > clang conflict with '-march=native' > aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just > python3 > 70291edd23 Trac #14821: Weird error in exponential integral > 583e83e86d Trac #7423: plot3d can't handle log(0) > d7c2285977 Trac #31243: Stronger Categories for Manifold Examples: > Connectedness > 6ef10b86c1 Trac #31240: sage-flatsurf pip package > 513046f42d Trac #31238: Add admcycles as an optional package > a33370064e Trac #31237: Add slabbe as an optional package > 712ca6e170 Trac #31234: multiplication of matrix with zero columns or rows > fails > 8c3804cc20 Trac #31233: Categories for Homset of Manifolds do not meet > e1bd5e3fe5 Trac #31229: more typing annotations in Tamari interval posets > 02d0fc8821 Trac #31226: Generalize face iterator of combinatorial > polyhedron to locally branched lattices > d9745ca3e1 Trac #31224: Add surface-dynamics as a pip package > 8101d78056 Trac #31221: Alllow arbitrary folder as output directory of > docbuild > 96bac10d15 Trac #31220: Remove test for safe directory while doctesting > 7eebf61583 Trac #31219: Fix escape of docstring for derivative method > a704ef5b17 Trac #31215: Documentation of Item Assignment Behavior for > Bundle Connections > c4f0516700 Trac #31212: fix submonoid method when the generating set > include the identity > bf9205aebc Trac #31210: Make it possible to run github workflows manually > 5477a
[sage-release] Re: Sage 9.3.beta7 released
Fixed in https://trac.sagemath.org/ticket/31358 On Sunday, February 7, 2021 at 9:06:37 PM UTC-8 Matthias Köppe wrote: > These LDFLAGS are read from `python3 -m sysconfig`. The "-L." flag there > is causing this python3 to be rejected by the new checks from > https://trac.sagemath.org/ticket/31132 . > Looks like using this flag is a gentoo specialty. > > On Sunday, February 7, 2021 at 8:42:35 PM UTC-8 Steven Trogdon wrote: > >> OK, here is the reason >> >> g++ -std=gnu++11 -fPIC -I/local/sage-git/sage/conftest_venv/include >> -I/usr/include/python3.9 -c conftest.cpp -o >> conftest.dir/temp.linux-x86_64-3.9/conftest.o -std=c++11 >> creating conftest.dir/lib.linux-x86_64-3.9 >> x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed >> conftest.dir/temp.linux-x86_64-3.9/conftest.o -L/usr/lib64 -o >> conftest.dir/lib.linux-x86_64-3.9/ >> config_check_distutils_cxx.cpython-39-x86_64-linux-gnu.so >> LDFLAGS = "-Wl,-O1 -Wl,--as-needed -L." >> configure:32030: result: no, this is a misconfigured Python whose >> sysconfig compiler/linker flags contain -I or -L options, which may cause >> wrong versions of libraries to leak into the build of Python packages - see >> https://trac.sagemath.org/ticket/31132; to use it anyway, use >> ./configure --with-python=/usr/bin/python3 >> >> I have >> >> $ echo $LDFLAGS >> -Wl,-O1 -Wl,--as-needed >> >> and I've had this set for some time (several years). >> >> On Sunday, February 7, 2021 at 9:30:29 PM UTC-7 Steven Trogdon wrote: >> >>> This beta does not pick up on my system (Gentoo) python. From config.log >>> >>> configure:39140: result: python3-3.9.1: no >>> suitable system package; will be installed as an SPKG >>> >>> And my system python >>> >>> $ python >>> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >>> [GCC 9.3.0] on linux >>> Type "help", "copyright", "credits" or "license" for more information. >>> >>> >>> >>> $ python3 >>> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >>> [GCC 9.3.0] on linux >>> Type "help", "copyright", "credits" or "license" for more information. >>> >>> >>> On Sunday, February 7, 2021 at 3:04:42 PM UTC-7 Volker Braun wrote: >>> As always, you can get the latest beta version from the "develop" git branch. Alternatively, the self-contained source tarball is at http://www.sagemath.org/download-latest.html 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to 9.3.beta7 6096110e06 Trac #30517: MemoryError in doctesting combinat/designs/gen_quadrangles_with_spread.pyx e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol d856033dd6 Trac #31144: refresh the file polyhedron/plot.py eb9bae531a Trac #31143: shorten range(0, *) in combinat folder 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol 5a4ad12275 Trac #31138: Document WSL Installation c8a7960598 Trac #31134: Update setuptools and setuptools_scm 45e7ada314 Trac #24459: Segfault in matrix_integer_dense 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic values 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle connections 00cacf3803 Trac #31272: Improve the documentation for tensor() 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" mechanism, fix script to work without SAGE_ROOT 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor products with non-signed modules 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product definition there 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets 35ad55518c Trac #31261: Update pplpy to 0.8.6 d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 57211cf752 Trac #31257: quo_rem gives wrong answers for LaurentPolynomial_mpair b282cf6d2d Trac #31256: more care for pbori e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in matrices 09f5b07182 Trac #31239: Add ore_algebra optional package 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip system package installs and other steps, add mechanism for a local interactive shell 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs 3925e96e0a Trac #31196: Code Improvements for Mutability module 01ad25fc3f Trac #31194: Make Class with Mutability compatible with require_mutable wrapper 99d4307f61 Trac #31121: Further refactoring of eta products file 6dda91cd3b Trac #31035: Remove mathjax configu
[sage-release] Re: Sage 9.3.beta7 released
These LDFLAGS are read from `python3 -m sysconfig`. The "-L." flag there is causing this python3 to be rejected by the new checks from https://trac.sagemath.org/ticket/31132 . Looks like using this flag is a gentoo specialty. On Sunday, February 7, 2021 at 8:42:35 PM UTC-8 Steven Trogdon wrote: > OK, here is the reason > > g++ -std=gnu++11 -fPIC -I/local/sage-git/sage/conftest_venv/include > -I/usr/include/python3.9 -c conftest.cpp -o > conftest.dir/temp.linux-x86_64-3.9/conftest.o -std=c++11 > creating conftest.dir/lib.linux-x86_64-3.9 > x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed > conftest.dir/temp.linux-x86_64-3.9/conftest.o -L/usr/lib64 -o > conftest.dir/lib.linux-x86_64-3.9/ > config_check_distutils_cxx.cpython-39-x86_64-linux-gnu.so > LDFLAGS = "-Wl,-O1 -Wl,--as-needed -L." > configure:32030: result: no, this is a misconfigured Python whose > sysconfig compiler/linker flags contain -I or -L options, which may cause > wrong versions of libraries to leak into the build of Python packages - see > https://trac.sagemath.org/ticket/31132; to use it anyway, use ./configure > --with-python=/usr/bin/python3 > > I have > > $ echo $LDFLAGS > -Wl,-O1 -Wl,--as-needed > > and I've had this set for some time (several years). > > On Sunday, February 7, 2021 at 9:30:29 PM UTC-7 Steven Trogdon wrote: > >> This beta does not pick up on my system (Gentoo) python. From config.log >> >> configure:39140: result: python3-3.9.1: no >> suitable system package; will be installed as an SPKG >> >> And my system python >> >> $ python >> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >> [GCC 9.3.0] on linux >> Type "help", "copyright", "credits" or "license" for more information. >> >>> >> >> $ python3 >> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >> [GCC 9.3.0] on linux >> Type "help", "copyright", "credits" or "license" for more information. >> >>> >> On Sunday, February 7, 2021 at 3:04:42 PM UTC-7 Volker Braun wrote: >> >>> As always, you can get the latest beta version from the "develop" git >>> branch. Alternatively, the self-contained source tarball is at >>> http://www.sagemath.org/download-latest.html >>> >>> 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to >>> 9.3.beta7 >>> 6096110e06 Trac #30517: MemoryError in doctesting >>> combinat/designs/gen_quadrangles_with_spread.pyx >>> e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= >>> 7.2.0 >>> f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira >>> symbol >>> d856033dd6 Trac #31144: refresh the file polyhedron/plot.py >>> eb9bae531a Trac #31143: shorten range(0, *) in combinat folder >>> 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol >>> 5a4ad12275 Trac #31138: Document WSL Installation >>> c8a7960598 Trac #31134: Update setuptools and setuptools_scm >>> 45e7ada314 Trac #24459: Segfault in matrix_integer_dense >>> 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic >>> values >>> 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog >>> 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense >>> matrices >>> bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle >>> connections >>> 00cacf3803 Trac #31272: Improve the documentation for tensor() >>> 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" >>> mechanism, fix script to work without SAGE_ROOT >>> 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor >>> products with non-signed modules >>> 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product >>> definition there >>> 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets >>> 35ad55518c Trac #31261: Update pplpy to 0.8.6 >>> d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 >>> 57211cf752 Trac #31257: quo_rem gives wrong answers for >>> LaurentPolynomial_mpair >>> b282cf6d2d Trac #31256: more care for pbori >>> e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor >>> Fields >>> 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in >>> matrices >>> 09f5b07182 Trac #31239: Add ore_algebra optional package >>> 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to >>> skip system package installs and other steps, add mechanism for a local >>> interactive shell >>> 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense >>> graphs >>> 3925e96e0a Trac #31196: Code Improvements for Mutability module >>> 01ad25fc3f Trac #31194: Make Class with Mutability compatible with >>> require_mutable wrapper >>> 99d4307f61 Trac #31121: Further refactoring of eta products file >>> 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from >>> jupyter notebook >>> 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets >>> 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in >>> src/bin/sage-location >>> 5e36f5d72b Trac #31271: MR52: u
[sage-release] Re: Sage 9.3.beta7 released
The LDFLAGS is set only when building Sage. I have set nothing explicitly when building system python. On Sunday, February 7, 2021 at 9:42:35 PM UTC-7 Steven Trogdon wrote: > OK, here is the reason > > g++ -std=gnu++11 -fPIC -I/local/sage-git/sage/conftest_venv/include > -I/usr/include/python3.9 -c conftest.cpp -o > conftest.dir/temp.linux-x86_64-3.9/conftest.o -std=c++11 > creating conftest.dir/lib.linux-x86_64-3.9 > x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed > conftest.dir/temp.linux-x86_64-3.9/conftest.o -L/usr/lib64 -o > conftest.dir/lib.linux-x86_64-3.9/ > config_check_distutils_cxx.cpython-39-x86_64-linux-gnu.so > LDFLAGS = "-Wl,-O1 -Wl,--as-needed -L." > configure:32030: result: no, this is a misconfigured Python whose > sysconfig compiler/linker flags contain -I or -L options, which may cause > wrong versions of libraries to leak into the build of Python packages - see > https://trac.sagemath.org/ticket/31132; to use it anyway, use ./configure > --with-python=/usr/bin/python3 > > I have > > $ echo $LDFLAGS > -Wl,-O1 -Wl,--as-needed > > and I've had this set for some time (several years). > > On Sunday, February 7, 2021 at 9:30:29 PM UTC-7 Steven Trogdon wrote: > >> This beta does not pick up on my system (Gentoo) python. From config.log >> >> configure:39140: result: python3-3.9.1: no >> suitable system package; will be installed as an SPKG >> >> And my system python >> >> $ python >> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >> [GCC 9.3.0] on linux >> Type "help", "copyright", "credits" or "license" for more information. >> >>> >> >> $ python3 >> Python 3.9.1 (default, Jan 26 2021, 00:24:17) >> [GCC 9.3.0] on linux >> Type "help", "copyright", "credits" or "license" for more information. >> >>> >> On Sunday, February 7, 2021 at 3:04:42 PM UTC-7 Volker Braun wrote: >> >>> As always, you can get the latest beta version from the "develop" git >>> branch. Alternatively, the self-contained source tarball is at >>> http://www.sagemath.org/download-latest.html >>> >>> 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to >>> 9.3.beta7 >>> 6096110e06 Trac #30517: MemoryError in doctesting >>> combinat/designs/gen_quadrangles_with_spread.pyx >>> e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= >>> 7.2.0 >>> f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira >>> symbol >>> d856033dd6 Trac #31144: refresh the file polyhedron/plot.py >>> eb9bae531a Trac #31143: shorten range(0, *) in combinat folder >>> 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol >>> 5a4ad12275 Trac #31138: Document WSL Installation >>> c8a7960598 Trac #31134: Update setuptools and setuptools_scm >>> 45e7ada314 Trac #24459: Segfault in matrix_integer_dense >>> 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic >>> values >>> 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog >>> 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense >>> matrices >>> bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle >>> connections >>> 00cacf3803 Trac #31272: Improve the documentation for tensor() >>> 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" >>> mechanism, fix script to work without SAGE_ROOT >>> 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor >>> products with non-signed modules >>> 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product >>> definition there >>> 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets >>> 35ad55518c Trac #31261: Update pplpy to 0.8.6 >>> d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 >>> 57211cf752 Trac #31257: quo_rem gives wrong answers for >>> LaurentPolynomial_mpair >>> b282cf6d2d Trac #31256: more care for pbori >>> e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor >>> Fields >>> 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in >>> matrices >>> 09f5b07182 Trac #31239: Add ore_algebra optional package >>> 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to >>> skip system package installs and other steps, add mechanism for a local >>> interactive shell >>> 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense >>> graphs >>> 3925e96e0a Trac #31196: Code Improvements for Mutability module >>> 01ad25fc3f Trac #31194: Make Class with Mutability compatible with >>> require_mutable wrapper >>> 99d4307f61 Trac #31121: Further refactoring of eta products file >>> 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from >>> jupyter notebook >>> 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets >>> 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in >>> src/bin/sage-location >>> 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image >>> 7823deee62 Trac #31263: Broken `sage -b` >>> f0ca7dfb31 Trac #30725: macOS: spkg-ins
[sage-release] Re: Sage 9.3.beta7 released
OK, here is the reason g++ -std=gnu++11 -fPIC -I/local/sage-git/sage/conftest_venv/include -I/usr/include/python3.9 -c conftest.cpp -o conftest.dir/temp.linux-x86_64-3.9/conftest.o -std=c++11 creating conftest.dir/lib.linux-x86_64-3.9 x86_64-pc-linux-gnu-g++ -pthread -shared -Wl,-O1 -Wl,--as-needed conftest.dir/temp.linux-x86_64-3.9/conftest.o -L/usr/lib64 -o conftest.dir/lib.linux-x86_64-3.9/config_check_distutils_cxx.cpython-39-x86_64-linux-gnu.so LDFLAGS = "-Wl,-O1 -Wl,--as-needed -L." configure:32030: result: no, this is a misconfigured Python whose sysconfig compiler/linker flags contain -I or -L options, which may cause wrong versions of libraries to leak into the build of Python packages - see https://trac.sagemath.org/ticket/31132; to use it anyway, use ./configure --with-python=/usr/bin/python3 I have $ echo $LDFLAGS -Wl,-O1 -Wl,--as-needed and I've had this set for some time (several years). On Sunday, February 7, 2021 at 9:30:29 PM UTC-7 Steven Trogdon wrote: > This beta does not pick up on my system (Gentoo) python. From config.log > > configure:39140: result: python3-3.9.1: no > suitable system package; will be installed as an SPKG > > And my system python > > $ python > Python 3.9.1 (default, Jan 26 2021, 00:24:17) > [GCC 9.3.0] on linux > Type "help", "copyright", "credits" or "license" for more information. > >>> > > $ python3 > Python 3.9.1 (default, Jan 26 2021, 00:24:17) > [GCC 9.3.0] on linux > Type "help", "copyright", "credits" or "license" for more information. > >>> > On Sunday, February 7, 2021 at 3:04:42 PM UTC-7 Volker Braun wrote: > >> As always, you can get the latest beta version from the "develop" git >> branch. Alternatively, the self-contained source tarball is at >> http://www.sagemath.org/download-latest.html >> >> 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to >> 9.3.beta7 >> 6096110e06 Trac #30517: MemoryError in doctesting >> combinat/designs/gen_quadrangles_with_spread.pyx >> e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= >> 7.2.0 >> f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira >> symbol >> d856033dd6 Trac #31144: refresh the file polyhedron/plot.py >> eb9bae531a Trac #31143: shorten range(0, *) in combinat folder >> 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol >> 5a4ad12275 Trac #31138: Document WSL Installation >> c8a7960598 Trac #31134: Update setuptools and setuptools_scm >> 45e7ada314 Trac #24459: Segfault in matrix_integer_dense >> 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic >> values >> 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog >> 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense >> matrices >> bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle >> connections >> 00cacf3803 Trac #31272: Improve the documentation for tensor() >> 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" >> mechanism, fix script to work without SAGE_ROOT >> 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor >> products with non-signed modules >> 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product >> definition there >> 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets >> 35ad55518c Trac #31261: Update pplpy to 0.8.6 >> d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 >> 57211cf752 Trac #31257: quo_rem gives wrong answers for >> LaurentPolynomial_mpair >> b282cf6d2d Trac #31256: more care for pbori >> e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor >> Fields >> 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in >> matrices >> 09f5b07182 Trac #31239: Add ore_algebra optional package >> 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to >> skip system package installs and other steps, add mechanism for a local >> interactive shell >> 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense >> graphs >> 3925e96e0a Trac #31196: Code Improvements for Mutability module >> 01ad25fc3f Trac #31194: Make Class with Mutability compatible with >> require_mutable wrapper >> 99d4307f61 Trac #31121: Further refactoring of eta products file >> 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter >> notebook >> 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets >> 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in >> src/bin/sage-location >> 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image >> 7823deee62 Trac #31263: Broken `sage -b` >> f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of >> clang conflict with '-march=native' >> aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just >> python3 >> 70291edd23 Trac #14821: Weird error in exponential integral >> 583e83e86d Trac #7423: plot3d can't handle log(0) >> d7c2285977 Trac #31243: Str
[sage-release] Re: Sage 9.3.beta7 released
This beta does not pick up on my system (Gentoo) python. From config.log configure:39140: result: python3-3.9.1: no suitable system package; will be installed as an SPKG And my system python $ python Python 3.9.1 (default, Jan 26 2021, 00:24:17) [GCC 9.3.0] on linux Type "help", "copyright", "credits" or "license" for more information. >>> $ python3 Python 3.9.1 (default, Jan 26 2021, 00:24:17) [GCC 9.3.0] on linux Type "help", "copyright", "credits" or "license" for more information. >>> On Sunday, February 7, 2021 at 3:04:42 PM UTC-7 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > 6096110e06 Trac #30517: MemoryError in doctesting > combinat/designs/gen_quadrangles_with_spread.pyx > e67fc51749 Trac #31148: MR51: Allow Matplotlib to use system qhull >= 7.2.0 > f3740e8add Trac #31147: Add missing curly braces in latex of Kodaira symbol > d856033dd6 Trac #31144: refresh the file polyhedron/plot.py > eb9bae531a Trac #31143: shorten range(0, *) in combinat folder > 9d4f2d1525 Trac #31140: use ⨂ for unicode of tensor symbol > 5a4ad12275 Trac #31138: Document WSL Installation > c8a7960598 Trac #31134: Update setuptools and setuptools_scm > 45e7ada314 Trac #24459: Segfault in matrix_integer_dense > 9bdf1d149f Trac #24317: Doctest: Improve conversion of inexact symbolic > values > 85f81e86d3 Trac #21907: Bug in Maxima interface wrt polylog > 913b025ac5 Trac #31283: 1000× speedup of conjugate of double dense matrices > bfe6fd9654 Trac #31273: Remove deprecated `form` input for bundle > connections > 00cacf3803 Trac #31272: Improve the documentation for tensor() > 50c1a5d655 Trac #31270: Remove sage-location's "sage-force-relocate" > mechanism, fix script to work without SAGE_ROOT > 3f5faf58b6 Trac #31266: Signed tensor products does not allow tensor > products with non-signed modules > 1d8b95def5 Trac #31265: changes in kschur to get rid of specific product > definition there > 9c39188e60 Trac #31262: Implement non zero chunks for sparse bitsets > 35ad55518c Trac #31261: Update pplpy to 0.8.6 > d5581ba0ea Trac #31258: Upgrade cmake to 3.19.3 > 57211cf752 Trac #31257: quo_rem gives wrong answers for > LaurentPolynomial_mpair > b282cf6d2d Trac #31256: more care for pbori > e8c83f5b70 Trac #31255: Follow Up: Mutability of Sections and Tensor Fields > 573df518ba Trac #31254: Do not perform unnecesssary subdivisions in > matrices > 09f5b07182 Trac #31239: Add ore_algebra optional package > 6a5ad3f3eb Trac #31216: tox.ini (local): Add environment variables to skip > system package installs and other steps, add mechanism for a local > interactive shell > 1ad5cb3ec9 Trac #31197: Use bitsets/binary matrix for edges of dense graphs > 3925e96e0a Trac #31196: Code Improvements for Mutability module > 01ad25fc3f Trac #31194: Make Class with Mutability compatible with > require_mutable wrapper > 99d4307f61 Trac #31121: Further refactoring of eta products file > 6dda91cd3b Trac #31035: Remove mathjax configuration/symlink from jupyter > notebook > 2c32dab63a Trac #27103: Enable SIMD-instructions for Bitsets > 6b64832a66 Trac #21783: QEPCAD: get rid of qepcad bits in > src/bin/sage-location > 5e36f5d72b Trac #31271: MR52: upgrade ubuntu system in docker image > 7823deee62 Trac #31263: Broken `sage -b` > f0ca7dfb31 Trac #30725: macOS: spkg-install scripts that force use of > clang conflict with '-march=native' > aadda8f345 Trac #30731: Replace use of build/bin/sage-python23 by just > python3 > 70291edd23 Trac #14821: Weird error in exponential integral > 583e83e86d Trac #7423: plot3d can't handle log(0) > d7c2285977 Trac #31243: Stronger Categories for Manifold Examples: > Connectedness > 6ef10b86c1 Trac #31240: sage-flatsurf pip package > 513046f42d Trac #31238: Add admcycles as an optional package > a33370064e Trac #31237: Add slabbe as an optional package > 712ca6e170 Trac #31234: multiplication of matrix with zero columns or rows > fails > 8c3804cc20 Trac #31233: Categories for Homset of Manifolds do not meet > e1bd5e3fe5 Trac #31229: more typing annotations in Tamari interval posets > 02d0fc8821 Trac #31226: Generalize face iterator of combinatorial > polyhedron to locally branched lattices > d9745ca3e1 Trac #31224: Add surface-dynamics as a pip package > 8101d78056 Trac #31221: Alllow arbitrary folder as output directory of > docbuild > 96bac10d15 Trac #31220: Remove test for safe directory while doctesting > 7eebf61583 Trac #31219: Fix escape of docstring for derivative method > a704ef5b17 Trac #31215: Documentation of Item Assignment Behavior for > Bundle Connections > c4f0516700 Trac #31212: fix submonoid method when the generating set > include the identity > bf9205aebc Trac #31210: Make it possible to run github workf
[sage-release] Re: Sage 9.3.beta7 released
On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 > > First test results from https://github.com/sagemath/sage/actions/runs/545994902: ubuntu-bionic-standard: (python 3.6) still https://trac.sagemath.org/ticket/31191 debian-bullseye-standard: New(?) numerics issues: sage -t --random-seed=0 src/sage/finance/time_series.pyx # 8 doctests failed sage -t --random-seed=0 src/sage/geometry/polyhedron/library.py # 1 doctest failed sage -t --random-seed=0 src/sage/geometry/polyhedron/base.py # 1 doctest failed sage -t --random-seed=0 src/sage/matrix/matrix_double_dense.pyx # 2 doctests failed sage -t --random-seed=0 src/sage/matrix/matrix_integer_dense.pyx # 1 doctest failed sage -t --random-seed=0 src/sage/numerical/sdp.pyx # 2 doctests failed sage -t --random-seed=0 src/sage/tests/books/computational-mathematics-with-sagemath/float_doctest.py # 1 doctest failed -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/00b1b577-5a54-4655-a168-a53f0527a569n%40googlegroups.com.
[sage-release] Re: Sage 9.3.beta7 released
On Sunday, February 7, 2021 at 2:04:42 PM UTC-8 Volker Braun wrote: > As always, you can get the latest beta version from the "develop" git > branch. Alternatively, the self-contained source tarball is at > http://www.sagemath.org/download-latest.html > Thanks, Volker, for preparing the new release. > 8453ffb849 (tag: 9.3.beta7, trac/develop) Updated SageMath version to > 9.3.beta7 [...] > a549452a4b Trac #30589: Upgrade Python to 3.9.1, pip to 20.3.3 > All - if you use python installed by Sage, note that this update contains the Python 3.9 upgrade, which will trigger rebuilds of all Python packages. Developers who use homebrew on macOS -- I recommend that you update homebrew packages to latest; in particular python@3.9 to the latest build (3.9.1_8). Further fixes for known build errors on homebrew are on https://trac.sagemath.org/ticket/31335 (which needs testing). -- You received this message because you are subscribed to the Google Groups "sage-release" group. To unsubscribe from this group and stop receiving emails from it, send an email to sage-release+unsubscr...@googlegroups.com. To view this discussion on the web visit https://groups.google.com/d/msgid/sage-release/518271b2-258c-4050-9530-e6609e6a97c9n%40googlegroups.com.