Re: [Artemis-users] Intergenic region extraction

2007-12-13 Thread Tim Carver
For those interested in doing this: I have added an option in Artemis under the Create menu to create features in the intergenic regions. If you want to try this new function it is in the development version. Look for the ³Development² section on the Artemis homepage and click on LAUNCH ARTEMIS

[Artemis-users] Intergenic region extraction

2007-12-12 Thread Duffield Melanie L
Hello, I would like to extract all the non-coding region of sequence from my bacterial sequence and write this out to a file. Is there any way of doing this in Artemis? I can select all CDS or genes and I've tried toggle selection but this then selects any features not previously selected

Re: [Artemis-users] Intergenic region extraction

2007-12-12 Thread Tim Carver
Hi Mel You can use the ŒCreate Intron Features¹ option under the Create menu and then write those to file. Regards Tim On 12/12/07 09:39, Duffield Melanie L [EMAIL PROTECTED] wrote: Hello, I would like to extract all the non-coding region of sequence from my bacterial sequence and write

Re: [Artemis-users] Intergenic region extraction

2007-12-12 Thread Tim Carver
Opps. I just realised that isn¹t exactly what you meant. I am not sure that there is a way of doing this in Artemis easily and you may need a script. Tim On 12/12/07 10:40, Tim Carver [EMAIL PROTECTED] wrote: Hi Mel You can use the ŒCreate Intron Features¹ option under the Create menu and

RE: [Artemis-users] Intergenic region extraction

2007-12-12 Thread andrew warry (BITS)
: 12 December 2007 10:41 To: Duffield Melanie L; artemis-users@sanger.ac.uk Subject: Re: [Artemis-users] Intergenic region extraction Hi Mel You can use the 'Create Intron Features' option under the Create menu and then write those to file. Regards Tim On 12/12/07 09:39, Duffield Melanie L