OK, I got it to work.
I had to delete the original plugin as root, even though I created it as
another user.
Once I put the correct path in, was fine.
Nice work Micha!
-Jeremy
On 3/16/07, Nicklas Nordborg < [EMAIL PROTECTED]> wrote:
Jeremy Davis-Turak wrote:
> Ok, so I made a rookie mistake
Jeremy Davis-Turak wrote:
> Ok, so I made a rookie mistake and forgot to clear the filter ...
> The plugin is there, with the correct path. However, I never fully got
> through the installation without errors. I now have the following problems:
>
> 1) I don't have an 'import' tab in the detail
Hi,
> Ok, so I made a rookie mistake and forgot to clear the filter ...
Happens to all of us :-)
> However, I never fully got
> through the installation without errors. I now have the following
> problems:
>
> 1) I don't have an 'import' tab in the detail view of Experiments
(base
> 2.1.
Ok, so I made a rookie mistake and forgot to clear the filter ...
The plugin is there, with the correct path. However, I never fully got
through the installation without errors. I now have the following problems:
1) I don't have an 'import' tab in the detail view of Experiments (base
2.1.1).
Jeremy Davis-Turak wrote:
> On 3/14/07, Nicklas Nordborg <[EMAIL PROTECTED]> wrote:
>> Can someone please give us a hint about how to reproduce this behavior?
>> When I add a new plugin, BASE will complain if I enter an incorrect path.
>
> Nicklas,
>
> To reproduce this error, I would try creati
On 3/14/07, Nicklas Nordborg <[EMAIL PROTECTED]> wrote:
> Can someone please give us a hint about how to reproduce this behavior?
> When I add a new plugin, BASE will complain if I enter an incorrect path.
Nicklas,
To reproduce this error, I would try creating the definition with the
wrong path.
Micha Bayer wrote:
> Hi,
>
> Yes, I have had this happen too after giving it the wrong path. Sadly
> the only way to get rid of the duplicate entry seems to be to delete
> directly in the database. You need to find it in the data of the
> PluginDefinitions table and delete the entry, but be aware
/MichaBayer.htm
=
> -Original Message-
> From: [EMAIL PROTECTED] [mailto:basedb-users-
> [EMAIL PROTECTED] On Behalf Of Jeremy Davis-Turak
> Sent: 09 March 2007 19:38
> To: BASE ML
> Subject: Re: [base] batch importer plugin is available for t
Hi,
I am trying to install the batch data importer but I get the following error:
"Duplicate entry 'sbrn.base.BatchDataImporter' for key 2"
(I tried doing it once but I typed the wrong path; now that I do it
again I get this error).
Below is the stack trace. Please help!
Thanks,
Jeremy
Versio
] On Behalf Of Dominic Oyeniran
> Sent: 20 February 2007 11:22
> To: BASE ML
> Subject: Re: [base] batch importer plugin is available for testing now
>
> Hi Micha,
>
> I did another test run with a non-root user, as you suggested and the
> import failed (see the exceptio
Hi Micha,
I did another test run with a non-root user, as you suggested and the
import failed (see the exception). I have stated what I noticed below.
Please check them out in addition to the suggestion by Nicklas
=
===NEW BATCH IMPORT =
==
Nicklas Nordborg wrote:
> Micha Bayer wrote:
>
>> Hi Dominic,
>>
>> Thanks for trying this out.
>>
>>
>>> I tested the batch import today, on an affy experiment and I got the
>>>
>> ff
>>
>>> exception:
>>>
>>> =
>>> ===NE
Micha Bayer wrote:
> Hi Dominic,
>
> Thanks for trying this out.
>
>> I tested the batch import today, on an affy experiment and I got the
> ff
>> exception:
>>
>> =
>> ===NEW BATCH IMPORT =
>> =
Hi Dominic,
Thanks for trying this out.
> I tested the batch import today, on an affy experiment and I got the
ff
> exception:
>
> =
> ===NEW BATCH IMPORT =
> =
> zn =HG-U133A.cdf
> experiment: Ex
Hi Micha,
Nice work.
I tested the batch import today, on an affy experiment and I got the ff
exception:
=
===NEW BATCH IMPORT =
=
zn =HG-U133A.cdf
experiment: Experiment[id=5; name=Batch Importer
Hi,
An early, alpha-quality version of the batch data import plugin is now
available at
http://lev.thep.lu.se/trac/baseplugins/wiki/BatchDataImporter
This version has been through the first round of bug fixes but has then
not been tested by anyone other than myself locally, so please feel free
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