Hello, if you mean theoretical docking, here is an old list of links:https://zlab.umassmed.edu/zdock/dockingsites.shtmlSome of these will still be maintained.Jon CooperOn 10 Feb 2020 16:50, Sarah Bowman wrote:
Hi Careina,
There’s a program called FRODOCK that generates predictions of how
Hi Careina,
There’s a program called FRODOCK that generates predictions of how two proteins
could interact:
http://chaconlab.org/modeling/frodock
Cheers,
Sarah
Sarah EJ Bowman, PhD
Associate Research Scientist, Hauptman-Woodward Medical Research Institute
Director, High-Throughput
.
Cheers,
Francisco
From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of
Francisco Hernandez-Guzman
Sent: Thursday, August 02, 2012 10:21 AM
To: CCP4BB@JISCMAIL.AC.UK
Subject: Re: [ccp4bb] Protein-Protein Interactions
Hi Lorenzo,
If the structure for your receptor is unknown
Dear Colleagues,
I have a question for all of you bioinformatics oriented structural biologists:
How do I predict the sites of protein-protein interactions between two
receptors that have been proven to interact biochemically but lack specific
details regarding proximity. This is not a
Subject: [ccp4bb] Protein-Protein Interactions
Dear Colleagues,
I have a question for all of you bioinformatics oriented structural biologists:
How do I predict the sites of protein-protein interactions between two
receptors that have been proven to interact biochemically but lack specific
details
Mariah,
you may want to try PISA at
http://www.ebi.ac.uk/msd-srv/prot_int/pistart.html
Eugene
On Mon, 17 Aug 2009, protein.chemist protein.chemist wrote:
Hello All,
Can anyone tell me what are the programs used to find out the different
interactions in a protein.
I am talking about both
Hi,
look in our servers list for interaction and contact analysis
http://bip.weizmann.ac.il/toolbox/structure/tertiary.htm#contact
pay attention to PISA which is very good for intermolecular and PIC
for intra.
Good luck
Rotem
On 17 Aug, 2009, at 20:13, protein.chemist protein.chemist
Hello All,
Can anyone tell me what are the programs used to find out the different
interactions in a protein.
I am talking about both intra and intermolecular interactions.
Thanks in advance.
Mariah
--
Mariah Jones
Department of Biochemistry
University of Florida
.
Regina
--- On Mon, 8/17/09, protein.chemist protein.chemist pp73...@gmail.com wrote:
From: protein.chemist protein.chemist pp73...@gmail.com
Subject: [ccp4bb] Protein Protein interactions
To: CCP4BB@JISCMAIL.AC.UK
Date: Monday, August 17, 2009, 1:13 PM
Hello All,
Can anyone tell me what
