Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread Bosch, Juergen
Hi Anita, so you tested your crystals inhouse, any idea how they do at the synchrotron ? Still no diffraction ? Since it's a hexamer I would expect the His-tag to be not so important and would rather rescreen with seeding first to see if any other conditions might result in diffracting crystals

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread Jürgen Bosch
I'd say since you obtained crystals with your tag it is not a disturbing factor and either disordered or making contacts. So removing the tag you might end up not getting crystals in the worst case. Now to the question why they don't diffract. Did you test the old fashioned way at RT in capillar

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread Jacob Keller
e on the > right hand side of the cleavage site.  Adding one or two amino acids after > the current cleavage site may help. > > Zhijie > > From: anita p > Sent: Friday, April 08, 2011 5:10 AM > To: CCP4BB@JISCMAIL.AC.UK > Subject: Re: [ccp4bb] Tev Cleavage issue !! > Thanks e

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread Zhijie Li
a p Sent: Friday, April 08, 2011 5:10 AM To: CCP4BB@JISCMAIL.AC.UK Subject: Re: [ccp4bb] Tev Cleavage issue !! Thanks everyone for your suggestions ! Artem has pointed out that low diffraction of the crystal might be because of other problems .. If you could highlight a bit more on this issue

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread anita p
Thanks everyone for your suggestions ! Artem has pointed out that low diffraction of the crystal might be because of other problems .. If you could* highlight a bit more on this issue it would be helpful for me.* I have tried to seperate the cleaved, uncleaved and TEV over MonoQ column but there w

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-08 Thread Martin Hällberg
Dear Anita, Sometimes the protein of interest has a relatively strong inherent binding affinity to the IMAC column. Have you tried to bind the cleavage reaction to an IMAC column and then elute using a shallow imidazole gradient? In fact, Porath developed IMAC chromatography as a tool for prote

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-07 Thread Peter Czabotar
Hi Anita, We have had success setting up drops with TEV present. We simply added TEV at a 50:1 molar ratio and then set up the drops a couple of hours later. We went from having twinned crystals at 3A to untwinned at 2A, the crystal form also changed from orthorhombic to monoclinic, all in the

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-07 Thread Chen Guttman
Hey Anita, I would like to add to Artem's comment that you can also try and cleave the protein at 30c for 2hr and then continue the cleavage overnight at 4c (you should check and see that your protein can withstand 30c incubation for 2hr, of course). In regard to your non-diffracting crystals - you

Re: [ccp4bb] Tev Cleavage issue !!

2011-04-07 Thread Artem Evdokimov
For starters, you could re-clone the protein with e.g. just a His tag or move the tag to another end, or put some distance between the end of TEV site and the protein; or perhaps use no tag at all -- or a different one? Is it possible that the tag is messing you up - yes. Is it 'probable' - I can'

[ccp4bb] Tev Cleavage issue !!

2011-04-07 Thread anita p
Hi Crystallographers, I am working of 23 Kda protein with a Nterminal His tag and a TEV cleavage site. I am getting crystals with the his tag and tev site intact, but they dont diffract. *Is it probable that they dont diffract because of the extra his tag and the tev site?* I am trying to get