It's very unlikely to be right on anything much shorter than 12
residues. The confidence scores are a bit gung-ho.
Phil Evans wrote:
OK thanks.
I tried a different example, which did give me a (wrong) assignment - is
there any way of picking an alternative?
What pa
Ah OK
thanks
Phil
On 4 Jun 2009, at 15:05, Kevin Cowtan wrote:
It's very unlikely to be right on anything much shorter than 12
residues. The confidence scores are a bit gung-ho.
Phil Evans wrote:
OK thanks.
I tried a different example, which did give me a (wrong) a
OK thanks.
I tried a different example, which did give me a (wrong) assignment -
is there any way of picking an alternative?
What partly confused me before and again was that this command assigns
the sequence but doesn't build the side chains - you have to use the
I guess you didnt give it a chain id. When sequencing the closest
fragment this information is required (maybe it shouldnt, or at least it
should give the appropriate warning - I will look into it at some point).
B
> I'm trying to understand the Extensions-> Dock sequence dialogue.
> How
> doe
I'm trying to understand the Extensions-> Dock sequence dialogue. How
does it work?
I've tried
Place helix here
Select Dock Sequence
choose Helix molecule
Load sequence from a file
click "Sequence closest fragment"
then I get
assign-sequence-from-file2 "/Users/pre/Documents/Talks/
Cryst
Kevin Cowtan wrote:
Coot reads files with duplicate atom numbers
just fine (at least 0.6pre-latest does).
However Coot will ignore any lines beginning
ATOM 1?
ATOM 2?
etc
because those are not valid atom records. So that is the reason these
are being ignored.
Yes, we should say tha
