[deal.II] Step 14 - Comparing refinement criteria

2017-10-23 Thread Ehsan
. Best regards. Ehsan -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubs

[deal.II] Output the results at Gauss points

2017-10-10 Thread Ehsan
Hello, Is there a way to output the results at Gauss points to visualize it in VisIt or Paraview or Tecplot? (For example extract the displacement or stresses) Best regards. Ehsan -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https

[deal.II] Extracting results along line or surface

2017-07-28 Thread Ehsan
extract and plot results (e.g. displacements or stresses) along a *Line/Surface* (straight or curved). It is not important for me, how to do it, using deal ii or VisIt . I mean if extracting these data using VisIt features need less effort it is also ok for me. Thanks. Ehsan -- The deal.II

[deal.II] 3D mesh with CAD boundary

2017-02-24 Thread Ehsan Nedaaee
the boundaries of the domain then extrude a 3D mesh using them. I am going to do that but because I am new with dealii, I face some difficulties. It would be nice if I could have a sample code which do something like this, in order to learn how to fix my problems. Thank you in advance Ehsan

[deal.II] Re: Tensor Output

2017-01-09 Thread Ehsan
components in polar coordinates. I would like to send Sigma_xx, Sigma_xy and Sigma_yy to DataPostprocessor class and inside compute_derived_quantities_vector calculate S_rr. Best regards. Ehsan On Friday, January 6, 2017 at 3:10:56 PM UTC+1, Ehsan wrote: > > Hello, > > I have two question

[deal.II] Tensor Output

2017-01-06 Thread Ehsan
vector of vectors to add_data_vector, because it seems that it only accepts a vector of scalars? Best regards. Ehsan -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because

[deal.II] PARPACK issues

2016-09-19 Thread Ehsan Mihankhah
ror is about initial vector being zero and I cannot solve this problem by tuning any parameter it seems. Can anybody suggest a solution please? Thank you very much, Best regards, Ehsan, P.S: One important issue here is that the parpack_solver.h that comes with the package available on dealii websi

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-08-03 Thread Ehsan
rote: > > Dear Eshan, > > Sometimes it is necessary to manually remove CMakeCache.txt before > reconfiguring a project. Can you try to do this and see if you have any > further success? > > Regards, > J-P > > On Monday, August 1, 2016 at 2:42:25 PM UTC+2, Ehsan wrote: &g

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-08-01 Thread Ehsan
related to MPI, P4EST and TRILINOS, it is implemented. So something is wrong with setting MPI, P4EST or TRILINOS but I do not know what !!! best regards. Ehsan On Monday, August 1, 2016 at 2:32:22 PM UTC+2, Ehsan wrote: > > Dear Daniel, > > When I run cmake in terminal and the end I

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-08-01 Thread Ehsan
Dear Daniel, When I run cmake in terminal and the end I receive below warning: CMake Warning: Manually-specified variables were not used by the project: P4EST_DIR TRILINOS_DIR How should I solve this problem. Best regards. Ehsan On Monday, August 1, 2016 at 2:21:31 PM UTC+2, Ehsan

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-08-01 Thread Ehsan
Dear Daniel, In the "detailed.log" the "CMAKE_INSTALL_PREFIX:" is empty but I am sure that I defined it in cmake: I have a generat question. is it possible to compile deal ii with enabled Trilinos, P4EST, and MPI options? Best regards. Ehsan On Wednesday, July 27, 2016

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-07-27 Thread Ehsan
this folder? How can I change the path of this folder? Thanks Ehsan On Wednesday, July 27, 2016 at 12:42:03 PM UTC+2, Tobi Young wrote: > > Ehsan. > > Yes, but that is not what you have done. ;-) > > Look at the configure script in your first email again calmly and > *ver

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-07-27 Thread Ehsan
this folder? How can I change the path of this folder? Thanks Ehsan On Wednesday, July 27, 2016 at 12:42:03 PM UTC+2, Tobi Young wrote: > > Ehsan. > > Yes, but that is not what you have done. ;-) > > Look at the configure script in your first email again calmly and > *ver

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-07-27 Thread Ehsan
: Why deall-ii created a folder in root (/share/deal.II/) which has two sub folders (macros and scripts) ? Previous version of deal-ii did not create this folder? How can I change the path of this folder? Thanks Ehsan On Wednesday, July 27, 2016 at 12:29:34 PM UTC+2, Ehsan wrote: > > Dea

Re: [deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-07-27 Thread Ehsan
Dear Toby, But in below links they are -DDEAL_II_With_... https://www.dealii.org/developer/readme.html https://www.dealii.org/developer/external-libs/p4est.html Best, Ehsan On Wednesday, July 27, 2016 at 12:19:07 PM UTC+2, Tobi Young wrote: > > Hello Eshan, > > Perhaps here i

[deal.II] Step-42 -- Problem with Trilinos and P4EST

2016-07-27 Thread Ehsan
problem. Thanks. Ehsan -- The deal.II project is located at http://www.dealii.org/ For mailing list/forum options, see https://groups.google.com/d/forum/dealii?hl=en --- You received this message because you are subscribed to the Google Groups "deal.II User Group" group. To unsubscribe

Re: [deal.II] Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range

2016-07-05 Thread Ehsan Esfahani
on my computer and the problem on my computer remained the same as before :-( Best, Ehsan On Monday, July 4, 2016 at 5:00:51 PM UTC-5, Daniel Arndt wrote: > > Ehsan, > > All I can say: After switching the order of arguments in > SparseMatrix::add, your code runs for me with a r

Re: [deal.II] Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range

2016-07-04 Thread Ehsan Esfahani
violation. Best, Ehsan On Sunday, July 3, 2016 at 4:32:16 PM UTC-5, bangerth wrote: > > On 07/03/2016 03:50 PM, Ehsan Esfahani wrote: > > Dear All, > > > > Greetings. I changed step-25 (minor changes) in order to solve my > problem. Now > > I want to change this

[deal.II] Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range

2016-07-03 Thread Ehsan Esfahani
ERROR: Signal received* > *[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > <http://www.mcs.anl.gov/petsc/documentation/faq.html> for trouble shooting.* > *[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 * > *[0]PETSC ERROR: > /hom

[deal.II] Caught signal number 11 SEGV: Segmentation Violation, probably memory access out of range

2016-07-03 Thread Ehsan Esfahani
ERROR: Signal received* > *[0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html > <http://www.mcs.anl.gov/petsc/documentation/faq.html> for trouble shooting.* > *[0]PETSC ERROR: Petsc Release Version 3.6.3, Dec, 03, 2015 * > *[0]PETSC ERROR: > /hom

Re: [deal.II] About MPI vectors, ghosted vectors

2016-06-29 Thread Ehsan Esfahani
ame definitions on the doxygen <https://www.dealii.org/8.4.0/doxygen/deal.II/classPETScWrappers_1_1MPI_1_1Vector.html#pub-methods> . I've found out from examples that the first one make my vector ghosted but the second one make it non-ghosted. Am I right? Thanks in advance for you re

[deal.II] Re: Hanging node constraints generate new nonzero locations in parallel.

2016-06-09 Thread Ehsan Esfahani
[0]PETSC ERROR: /home/ehsan/apps/candi/deal.II-toolchain/deal.II-v8.4.0/examples/step-25 (mine)/step-25 on a arch-linux2-c-opt named levitasgrad01.me.iastate.edu by ehsan Thu Jun 9 16:12:49 2016 [0]PETSC ERROR: Configure options --prefix=/home/ehsan/apps/candi/deal.II-toolchain/petsc-3.6.3 --w

[deal.II] Re: changing step-25 based on step-40

2016-06-07 Thread Ehsan Esfahani
pirun -np 1)? Are there any extra errors > when running in debug mode, or are you already running it in debug mode? > > On Tuesday, June 7, 2016 at 7:02:42 PM UTC+2, Ehsan Esfahani wrote: >> >> Thank for your response. I'm not sure it's related because, previously

[deal.II] Re: changing step-25 based on step-40

2016-06-07 Thread Ehsan Esfahani
t;> >> [0]PETSC ERROR: Argument out of range >> >> [0]PETSC ERROR: Inserting a new nonzero at global row/column (0, 0) into >> matrix >> >> [0]PETSC ERROR: See http://www.mcs.anl.gov/petsc/documentation/faq.html >> for trouble shooting. >> >&g

[deal.II] changing step-25 based on step-40

2016-06-06 Thread Ehsan Esfahani
violates the sparsitypattern but I cannot find out where I'm doing this because the code is aborting and I cannot debug it correctly in Eclipse-Mars II. Also, is it really possible to change step-25 for MPI by using step-40 or I'm completely on a wrong road? Thanks for your help in a

[deal.II] "run configurations" problem in Eclipse (mars)

2016-05-27 Thread ehsan esfahani
Dear Dealii users, Greetings. As a person who is trying to learn Deal-ii, I'm trying to change step-25 for parallel computation based on step-40, I have changed this step for my problem (I solved my problem with modifying this step previously without MPI). Unfortunately, I got several errors. T

[deal.II] "run configurations" do not work in Eclipse

2016-05-27 Thread ehsan esfahani
Dear Bruno, Greetings. As a person who is trying to learn Deal-ii, I'm trying to change step-25 for parallel computation based on step-40, I have changed this step for my problem (I solved my problem with modifying this step previously without MPI). Unfortunately, I got several errors. The prob

Re: [deal.II] Re: Segmentation fault (core dumped) error

2016-05-23 Thread Ehsan
Dear Bruno, I did what you have recommended and the problem is solved. Thanks. Ehsan On Friday, May 20, 2016 at 6:01:14 PM UTC+2, Bruno Turcksin wrote: > > 2016-05-20 11:55 GMT-04:00 Bruno Turcksin >: > > looking more at the code I don't think that this is your proble

Re: [deal.II] Re: Segmentation fault (core dumped) error

2016-05-20 Thread Ehsan
? Thanks. Ehsan On Friday, May 20, 2016 at 3:27:04 PM UTC+2, Bruno Turcksin wrote: > > 2016-05-20 9:12 GMT-04:00 Ehsan >: > > #2 0x75cb614b in dealii::SparsityPattern::reinit > > (this=this@entry=0x7fffb498, m=829992, n=829992, max_per_row=8032) > >

Re: [deal.II] Re: Segmentation fault (core dumped) error

2016-05-20 Thread Ehsan
p_14.cc:2144 #21 0x004a6e78 in Step14::Framework<3>::run (descriptor=...) at /deal_II/J2/modified_step_14.cc:3004 #22 0x00471b16 in main () at /deal_II/J2/modified_step_14.cc:3072 Thanks Ehsan On Friday, May 20, 2016 at 2:57:29 PM UTC+2, Bruno Turcksin wrote: > > Ehs

Re: [deal.II] Re: Segmentation fault (core dumped) error

2016-05-20 Thread Ehsan
rote: > >> On 03/07/2016 05:07 AM, Ehsan wrote: >> >>> >>> >>> I checked CPU and memory usage and when the code crashes, it only uses >>> 0.2 of >>> total available memory and 0.05 of total allocated CPUs. >>> So it has plenty o

Re: [deal.II] Error during P4EST installation

2016-05-18 Thread ehsan esfahani
8 15:04 GMT-04:00 ehsan esfahani >: > > Yes, it seems. > > $ gfortran --version > > GNU Fortran (GCC) 4.8.5 20150623 (Red Hat 4.8.5-4) > > Copyright (C) 2015 Free Software Foundation, Inc. > > this was the result. > This is very strange, I have installe

Re: [deal.II] Error during P4EST installation

2016-05-18 Thread ehsan esfahani
ot; work? Sometimes it is called gfortran-48 or some > other variants and you get that error from p4est. > > Best, > > Bruno > > On Wednesday, May 18, 2016 at 2:50:43 PM UTC-4, ehsan esfahani wrote: >> >> What do you mean by saying "your fortran compiler

Re: [deal.II] Error during P4EST installation

2016-05-18 Thread ehsan esfahani
gt; > This happens when your fortan compiler is not useable. > Try to install gfortran on your machine and see if the problem goes away. > > Best, >Toby > > > > > 2016-05-18 17:29 GMT+02:00 ehsan esfahani >: > > Hello, > > > > I am

[deal.II] Error during P4EST installation

2016-05-18 Thread ehsan esfahani
Hello, I am trying to install a package (P4EST) along with D eal ii library . I got an error telling me that " Fortran 77 cannot create executables". My operation system is REDHAT LINUX and I find out package gcc-gfortran-4.8.5-4.el7.x86_64 already installed on my computer. I'm a beginner at r