Hi all,
is there no chance they could get it working in the 1 months time until
the meeting? :/
One solution could be a 3G / Wifi router with a 3G data card, has anyone
experienced this ?
I'm using a
One more thing:
I can bring this but I have no French SIM card to use.
http://travel-wifi.com might also be interesting.
Sascha
--
The Wellcome Trust Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in
On 28/11/14 15:48, Frank Oliver Glöckner wrote:
Dear Sascha Steinbiss,
Dear Prof. Dr. Gloeckner,
thanks for the information.
We discussed it and in general we agree that the HMM profiles derived
from LSURef_115_tax_silva_full_align_trunc.fasta can be distributed.
Thanks for getting back
Hi all,
But we would like to ask you to clearly indicate that the profiles are
only free for non-commercial usage, commercial users need a licence.
The easiest approach is to add a reference to the SILVA terms of
license assigned to the software/profile.
Argghh! this will prevent from being
and inform Torsten Seemann about
the results of the enquiry later.
Thanks
Sascha
On 29/11/14 11:49, olivier.sal...@codeless.fr wrote:
On 11/29/2014 12:29 PM, Sascha Steinbiss wrote:
Hi all,
But we would like to ask you to clearly indicate that the profiles are
only free for non-commercial usage
as it is.
Greetings from Hanoi
Andreas.
Thanks and enjoy your vacation :)
Sascha
On Sat, Nov 29, 2014 at 01:14:20PM +, Sascha Steinbiss wrote:
Hi Olivier and all,
thanks for the feedback. I have just adapted the barrnap package to go
into the non-free area and added the respective
looking forward to your response.
Best regards
Sascha Steinbiss
--
The Wellcome Trust Sanger Institute is operated by Genome Research
Limited, a charity registered in England with number 1021457 and a
company registered in England with number 2742969, whose registered
office is 215 Euston
.
It is basically a wrapper around nhmmer searching for a relatively
general rRNA pHMM, meant for de novo annotation.
All the best
Frank Oliver Glöckner
Best wishes from a former 'Nordlicht' (I think we met once when I still
was at the ZBH Hamburg)
Sascha Steinbiss
Am 26.11.2014 12:34, schrieb
Dear Steffen and Tim,
sounds cool and useful to help people find the right tool for a job in
the long run! I for one would prefer the long representation, with one
entry per binary. If I can find the time, I would even help updating the
metadata files with this kind of information once the format
Hi Thorsten,
may I kindly ask if you could consider into sponsoring aegean as well,
while you're at it? I finished it shortly before Andreas went on
vacation and he suggested someone else could step in? I wouldn't mind
having it sit in NEW for a while, but I would like to know if there's
any
On 20/11/14 22:16, Thorsten Alteholz wrote:
Hi Sascha,
Hi Thorsten,
[...]
not yet, data/share/vendor/jquery.dataTables.js
data/misc/amel-ogs-vs-ncbi-parseval-html/vendor/jquery.dataTables.js
are under GPLv2 as well and missing in your debian/copyright.
Ah, I see. I was assuming I could
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss sas...@steinbiss.name
* Package name: barrnap
Version : 0.5
Upstream Author : Torsten Seemann torsten.seem...@monash.edu
* URL : http://www.vicbioinformatics.com/software.barrnap.shtml
* License : GPL
Hi all,
I have packaged [1] AEGeAn [2] which contains a useful piece of software
for evaluating gene annotations against a reference [3], among others.
The package [4] is lintian clean and builds in pbuilder against sid.
Could anyone sponsor please? There's no need to hurry.
Thanks in advance,
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss sa...@tetrinetsucht.de
* Package name: aegean
Version : 0.10.2
Upstream Author : Daniel Standage daniel.stand...@gmail.com
* URL : http://standage.github.io/AEGeAn/
* License : ISC
Programming Lang: C
On 09.02.2014 16:50, Tony Travis wrote:
On 09/02/14 15:50, olivier.sal...@codeless.fr wrote:
[...] 1) in Brittany, in Saint Malo [0]. This is a really nice
place (old town from pirates and corsairs) with beautiful beach.
It needs however a 3 hours train ride from Paris (TGV). There is
an
it will not be forgotten. (Make sure
you set target distribution to UNRELEASED.)
Okay, will do this maybe later in the evening ;)
Kind regards
Andreas.
Kind regards
Sascha
--
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email
Sascha
P.S. If this is rather a candidate for the -mentors list just say so...
--
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni-hamburg.de
URL:http://www.zbh.uni-hamburg.de/steinbiss
Phone: +49 (40) 42838 7322
FAX
and upload with the next updated upstream
release.
Have a nice day,
You too, and best wishes
Sascha
- --
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni-hamburg.de
URL:http://www.zbh.uni-hamburg.de/steinbiss
Phone
.
Kind regards,
Sascha
- --
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni-hamburg.de
URL:http://www.zbh.uni-hamburg.de/steinbiss
Phone: +49 (40) 42838 7322
FAX:+49 (40) 42838 7312
-BEGIN PGP SIGNATURE
-BEGIN PGP SIGNED MESSAGE-
Hash: SHA256
On 03/01/2013 12:41 PM, Björn Canbäck wrote:
Hi!
Hi Bjoern, sorry to bother you one more time...
[...]
Please let me know if anything has to be changed.
I have noted that your new web page makes use of Javascript to link the
tarball, setting
?
It's fine the way it is now, thank you for your quick response!
Please let me know if there is something else to change.
Right now, I cannot think of anything, but I will get back to you if
something comes up.
cheers Björn
Cheers
Sascha
On Sun, Mar 3, 2013 at 4:36 PM, Sascha Steinbiss
sa
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss sa...@tetrinetsucht.de
* Package name: aragorn
Version : 1.2.36
Upstream Author : Dean Laslett gaiaqu...@gmail.com, Bjorn Canback
bcanb...@acgt.se
* URL : http://mbio-serv2.mbioekol.lu.se/ARAGORN/
* License
their collaboration with the Deb Med community.
Disclaimer: I do not have first-hand experience with Cloud BioLinux, I
just handed out some Cloud Computing papers for student seminar
assignments and that was one of them...
[1] http://www.biomedcentral.com/1471-2105/13/42
Best,
Sascha
- --
Sascha
my dm-upload --
anyone care to help out?
Best,
Sascha
- --
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni-hamburg.de
URL:http://www.zbh.uni-hamburg.de/steinbiss
Phone: +49 (40) 42838 7322
FAX:+49 (40) 42838
the single source file into a compressed tarball - possibly by some
added value of some documentation file. This would safe you the
extra get-orig-source target.
Okay, thank you. I will write up an email right now.
Kind regards Andreas.
Best regards,
Sascha
- --
Sascha Steinbiss
Center
easier cleaning up after
building.
Yes, I found that out too the hard way, hacking away ;) This will
definitely be fixed and make its way into the next release.
Hope this helps Andreas.
It definitely does! Thanks again for your time!
Sascha
- --
Sascha Steinbiss
Center for Bioinformatics
am not the upstream author, I wonder if it's good style to
contact him and ask whether he still maintains the source? The date on
the web site indicates he does.
- --
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni
Best,
Sascha
--
Sascha Steinbiss
Center for Bioinformatics
University of Hamburg
Bundesstr. 43
20146 Hamburg
Germany
Email: steinb...@zbh.uni-hamburg.de
URL:http://www.zbh.uni-hamburg.de/steinbiss
Phone: +49 (40) 42838 7322
FAX:+49 (40) 42838 7312
--
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