symbolic link to
/usr/bin/python3-restructuredtext-lint
/etc/alternatives/rst-lint: broken symbolic link to
/usr/bin/python3-rst-lint
/etc/alternatives/wsdump: broken symbolic link to /usr/bin/python3-wsdump
I guess this is fallout from Python 2 removal?
Please fix your packages.
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anorack
Fixed upstream in 0.2.8.
mwic
Fixed upstream in 0.7.9.
python-djvulibre
Fixed upstream in 0.8.7.
This one should probably be removed, though: there are no rev-deps, it's
orphaned in Debian, and it's likely to be orphaned upstream soon too.
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istration of the mls to
someone else, given you moved on from dpmt/papt :)
Very gladly! Now we only need this "someone else". Last time[1] I asked
the DPMT admins to take over the list admin duties, there were no
replies.
[0] <20130411191230.ga...@jwilk.net>
[1] <20150410194600.ga...@jwilk.net>
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well
sys.modules[where + '.' + name] = module
_attach_namespace(urllib3, 'requests.packages')
del _attach_namespace
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fail if it's running on
an automated enviroment. I could't find an elegant way to disable the
terminal pager.
Programs launching pagers must honour the PAGER environment variable
(see Policy §11.4). So adding this to debian/rules should do the trick:
export PAGER = cat
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a bug, you need to give a
better justification than “I said so”.
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the files that
upstream installed.
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diff -Nru python-biopython-1.64+dfsg/debian/python-biopython.install python-biopython-1.64+dfsg/debian/python-biopython.install
--- python-biopython-1.64+dfsg/debian/python-biopython.install 2014-03-06 11:18:03.0 +0100
+++ python-biopython
&&/;/g here.
TEMP_REZ=`mktemp -t` && \
PYTHONPATH=$(CURDIR) PYTHON=python$$i
testr-python$$PYMAJOR run --subunit | tee $$TEMP_REZ | subunit2pyunit ; \
And here too.
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Hi Sebastian,
debian-python@l.d.o, is a discussion list. We don't want all the bug
traffic or messages from dak here. Please set your Maintainer field to:
Debian Python Modules Team
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with a subje
ibility is to create the django-admin symlink in maintainer
scripts, with the target depending on which of python*-django packages
are installer. This is how src:sphinx manages its /usr/bin/sphinx-*
symlinks.
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ation then?
Yeah, that's the trick; I'm not sure. The best I could come up with
was an a priori list of known common vendorizations.
So something like this:
https://bitbucket.org/jwilk/lintian4python/src/default/vendors/debian/python/data/python2-embedded-code-copies
?
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* Daniele Tricoli , 2014-05-28, 15:36:
txclib -> urllib3 -> six
Jakub, which version of urllib3 are you referring to?
The one that is embedded in transifex-client.
I removed the embedded copy on 1.3-2 so it should be ok...
Great, thanks.
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y could implement
something more generic for detecting embedded copies of Python modules.)
Also, am I the only one that believe this is a bug, and that we should
do mass bug-filling?
It's absolutely a bug.
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build time (and thus these might be removed as well) or
not?
I strongly recommend rebuilding everything from source.
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ose --with-doctest
dh_auto_test: pybuild --test -i python{version} -p 2.7 --dir . returned exit code 13
debian/rules:20: recipe for target 'build' failed
make: *** [build] Error 13
dpkg-buildpackage: error: debian/rules build gave error exit status 2
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Index: debian/control
$(pyrun) 'make --directory=doc singlehtml' # eww!
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biom-format-2.0.0/biom/_transform.so
We don't want them to be accidentally used at build time. :)
Good catch! I'm now also excluding *.so and *.pyx.
Hmm, *.pyx? Aren't they source code from some *.c files?
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/_subsample.so
biom-format-2.0.0/biom/_transform.so
We don't want them to be accidentally used at build time. :)
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* Matthias Klose , 2014-05-19, 12:44:
we don't unpack jar files either.
Fortunately, we don't have to mimic all the Java misfeatures.
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/NeedRestart/Interp/Python.pm
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* Barry Warsaw , 2014-05-12, 09:41:
Note that some test suites do legitimate http/https access during their
tests. By "legitimate" I mean, they set up their own localhost
special-port service and vend files out of them.
AFAICS urllib honours the no_proxy environment variable.
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7;from Bio.pairwise2 import rint; print(rint.__module__)'
Bio.cpairwise2
It seems this module is not affected by the test suite since this runs
fine.
Yeah, as the code comment says, if the import fails, everything(?) still
works, just slower.
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to be checked
after a build, for example using "mc" to see the content of the .deb,
and going into the DEBIAN folder).
I find debc(1) very convenient for checking whether the built binary
packages make sense.
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dh_python{2,3}?
Given it's like less than 200 packages left, let's do it now. This is
smaller than e.g. a boost transition.
This tag doesn't catch indirect use of python-support, via dh or cdbs.
The actual number of affect packages is much higher.
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That attached (untested) patch should do the trick.
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diff --git a/Tests/test_GenomeDiagram.py b/Tests/test_GenomeDiagram.py
--- a/Tests/test_GenomeDiagram.py
+++ b/Tests/test_GenomeDiagram.py
@@ -27,7 +27,7 @@
"Install reportlab if you want to use Bio.Graphics.")
* Jakub Wilk , 2014-04-26, 21:12:
reportlab.graphics.renderPM.RenderPMError: Can't setFont(Times-Roman) missing
the T1 files?
Originally : makeT1Font() argument 2 must be
string, not None
Filed as #745985. Please let me know if the patch I made fixes all the
reportlab problems fo
Times-Roman) missing
the T1 files?
Originally : makeT1Font() argument 2 must be
string, not None
If I understand correctly, reportlab is trying to use non-free Adobe
PostScript fonts, which (unsurprisingly) doesn't work on Debian systems.
It should use the substitutes from the gsfonts package instead.
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from reportlab.graphics.shapes import Drawing
from reportlab.graphics import renderPM
d = Drawing(100, 100)
renderPM.drawToFile(d, 'test.png', 'PNG')
n.net/debian/pool/main/p/python-ebooklib/python-ebooklib_0.15-1.dsc
Don't hardcode Python versions in Depends. Use ${python:Depends} and
${python3:Depends} substitution variables instead.
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* Steve Langasek , 2013-09-18, 14:33:
On Wed, Sep 18, 2013 at 06:24:13PM +0200, Jakub Wilk wrote:
Following the “if it didn't happen on a mailing list, it didn't
happen”, I repeat here what I said on IRC:
12:26 < kwilk> So I rebuilt src:python-aalib, and I ended up these De
* Jakub Wilk , 2014-02-13, 00:27:
The CGI's code is supposed to be safeguarding against abuse,
The protection is not very good. (I'll disclose the details later.)
The exploit I had in mind was:
import re
from re import sys
imp = re.sys.modules['imp&
Of couse, it would be better if dh_python3 was Y2038-compliant. :)
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t.
Replacing $(shell ... ) with $$( ... ), and then adding appropriate
Breaks+Replaces should fix this bug. (I haven't tested the proposed fix
in practice yet.)
It still don't understand why this bug didn't trigger for the amd64
package. Perhaps the build log could shed some
d both for my local build and on the buildd. Source package
and build log are on http://people.debian.org/~jmm/
“You don't have permission to access
/~jmm/python2.7_2.7.3-6+deb7u1_i386-20140305-1206.gz on this server.”
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offer help with implementing any of the above options, because I
don't know cdbs. Sorry!
[0] Resolution for the timestamp check is 1 second. :(
http://bugs.python.org/issue18027
[1] --force (-f) force installation (overwrite any existing files)
[2] --executable (-e) specify final dest
ng referring to versioned interpreter
N: name. This is often a mistake.
N:
N: Severity: normal, Certainty: wild-guess
N:
N: Check: python/scripts, Type: binary
N:
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ide_dh_auto_test] Error 1
So setup.py installed stuff to "build/lib.linux-i686-2.7", but
PYTHONPATH is set to "build/lib.linux-i486-2.7".
/usr/share/python/python.mk defines a macro for determining build
directory. You might want to use it. :)
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* Olivier Berger , 2014-02-10, 10:51:
The CGI's code is supposed to be safeguarding against abuse,
The protection is not very good. (I'll disclose the details later.)
but I think some sandboxing would be better at the CGI invocation for
additional security.
Agreed.
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c already contains some extensions modules
written in Cython, so surely rewritting crypto.py and xattr.py in Cython
shouldn't be a big deal? :-)
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close the bug report and remove Sandro from the
Uploaders field?
No. Policy §5.6.3 reads “if the ‘Maintainer’ control field names a group
of people and a shared email address, the ‘Uploaders’ field must be
present and must contain at least one human with their personal email
address.”
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pikeproxy would have to be ported to the “new” API.
I guess that would be worth a bug report, then ?
I'm glad you volunteered to file them. ;-)
Beware that spikeproxy's copy is slightly modified; see the attached
diff.
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--- plucker-1.8/parser/python/PyPlucker/helper/ti
ld have to be ported to the “new” API.
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shebang with
sed. Adding this after dh_auto_install should do the trick:
sed -i -e '1 s,^#!.*,#!/usr/bin/python3,'
$(package_install_bin_dir)/python3-coverage
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* Ben Finney , 2014-01-26, 17:06:
How can I convince ‘dh_python3’ to set the shebang to the *default*
Python 3 interpreter?
dh_python3 --shebang=/usr/bin/python3
(if I recall correctly)
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with a subject of
nstall_futures patch.
Not shipping a deprecated and generically-named module, when there were
no reverse-dependencies relying on its existence, sounds like a
reasonable decision.
I'm however confused how "import concurrent" works, even if there's
nothing in /usr/lib/pytho
e").
It has always worked for me. Now what?
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depend on python-rdflib | python3-rdflib
/usr/bin/python can't use the modules shipped by python3-rdflib.
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Archive
*/and use the alternatives system/
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uld use ${python3:Depends} (NOT ${python:Depends}).
Build-dependency on pkg-config appears to be missing.
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(In fact, now that wheezy is released, you don't need to pre-depend on
multi-arch support even when you ship an actual shared library.)
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python-stdnum_0.8.1-1_all/usr/share/pyshared/python_stdnum-0.8.1.egg-info/requires.txt:distribute
See also bug #731825.
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Ar
f somebody steps up
and does the actual work of implementing a better solution and migrating the
existing information, Andreas will complain.
s/complain/comply/ perhaps?
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ilk.net
By the way: currently you also have to audit another file in addition to
d/watch if you need to exclude some files.
Unless you knew in advance that there's nothing to exclude, which was most
often the case, and you could guess it just by looking at version.
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before you can run
uscan. *sigh*
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hat is both policy-compliant and easy to understand. I don't want to
waste time glaring at extra 10 lines of code only to realize it's a fancy
wrapper over uscan.
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packages can integrate using dh_python2-based Sphinx?
That's right.
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* Jakub Wilk , 2012-05-03, 21:41:
2) Do not skip the "Before you begin"[0] step. This is very important: if two
packages share a namespace, either both or none of them must use
python-support. Also, it's not enough just to convert them all to dh_python2:
you must make sure (
it debian/prerm, moving the #DEBHELPER# token from line 4 to the
end of the file, and see if it helps?
As a side note, if the module name is "gavo", then the policy-compliant binary
package name is "python-gavo".
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py
$ python-coverage -x foo.py
foo
With Python 3 implementation, you'll get SyntaxError.
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go:
https://buildd.debian.org/status/fetch.php?pkg=python-ethtool&arch=i386&ver=0.7-1&stamp=1340805337
http://bugs.debian.org/683174
[0] Unfortunately Google doesn't seem to index Debian build logs. :( Perhaps
someone wants to implement buildlogsearch.debian.net?
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tible with both Python 2 and 3.
As I understand it, python{2,3}-coverage are NOT compatible, and therefore they
should NOT use alternatives.
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, Debian buildds don't block Internet access.
:(
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s to upstream bug report[0], which is about an
(almost) orthogonal problem. Philippe's fix would make birthday attacks harder.
Note however that make_nonce() and generate_nonce() docstrings say "generate
pseudorandom number", so they would have to be updated accordingly.
[0] http
* Dmitry Shachnev , 2013-09-21, 16:24:
Will you sponsor the new package (the package is mature enough for unstable,
but let's upload it to experimental until the mentioned fixes are uploaded)?
I won't have time to review or sponsor anything in the next few months. Sorry.
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phinx/1.1.3%2Bdfsg-4/sphinx/__init__.py#L21
2) We run tests against source that has this line kept intact. Then we patch
the line using sed:
http://sources.debian.net/src/sphinx/1.1.3%2Bdfsg-4/debian/rules#L66
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w
ption (say, --multiarch-me-harder), so that
maintainers can opt-in for :any dependencies.
That doesn't sound to me like it's optimizing for the common case.
The purpose of automatic dependency mechanism is not optimize for the common
case; such a mechanism should assume worst case.
-
n for :any dependencies.
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for common errors.
This package provides an experimental flavor of Lintian designed to
check packages implemented in Python.
Allergy advice
==
* contains: Perl (2.4 kloc), Python (1.0 kloc)
* may contain traces of things that are nuts
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chitecture.
12:30 < kwilk> And there's no way to determine automatically whether it cares
or not.
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blems prevent configuration of i18nspector:
i18nspector depends on python3:any (>= 3.2.3-3~).
dpkg: error processing i18nspector (--configure):
dependency problems - leaving unconfigured
Errors were encountered while processing:
i18nspector
E: Sub-process /usr/bin/dpkg returned an error co
I don't like it either.
Anyway, here's a list of bugs you might want to fix before uploading Sphinx 1.2
(beta or not) to unstable:
http://bugs.debian.org/cgi-bin/pkgreport.cgi?users=python-modules-t...@lists.alioth.debian.org;tag=sphinx1.2
https://bitbucket.org/birkenfeld/sphinx/issue
env-python-shebang usr/bin/woof
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* Ben Finney , 2013-09-09, 13:36:
* Use ‘.links’ to make a symlink for each package to
‘usr/share//foofile’ at
‘usr/lib/python${PYTHON_VERSION}/dist-packages/${DISTRIBUTION_NAME}/foofile’.
How can you do that without hardcoding Python version?
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thon ./debian/control 2>/dev/null
then
exec /usr/share/dh-python/dh_python2 $@
else
exec /usr/share/python/dh_python2 $@
fi
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* Michael Schutte , 2013-07-29, 10:31:
I have agreed with Jakub to take over python-docutils and I'm currently
preparing the first revision of the 0.11 release. I'd therefore like
to be added to the Modules Team. My username on Alioth is michi.
Welcome to the team! :-)
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wrong:
python-django-filter instead of python-django-filters :-(.
.oO( http://lists.debian.org/20130608225655.ga5...@jwilk.net )
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-name python-ajax-select
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* Barry Warsaw , 2013-07-24, 12:38:
In any case, it's come up that PEP 394 recommends distros start
adopting shebang lines that state /usr/bin/python2 in their scripts,
and I don't think we do this yet. We should!
We absolutely should not.
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* Barry Warsaw , 2013-06-28, 11:46:
Could the project admins for DPMT and PAPT please add my non-guest
account?
Done for DPMT.
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ar with the
process.
I use a lot of Python packages for my pet projects but also at work.
Because of this, I may propose more packages in the future and also
help to backport some.
In the long run, my personal goal is to become a DD :-)
Welcome to the team! :)
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would help finding a sponsor.
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admins to
get it fixed.
I used "dch -a" to append my change into the existing changelog.
Hopefully that's doing the right thing.
Yup, the changelog looks good to me.
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entry under 2.2.6.7-3, or (C) Let the maintainers edit and sign off on
the changelog.
(A') Use dch(1), which should do the right thing. :)
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* Sandro Tosi , 2013-06-21, 08:37:
Sandro, are you okay with me adding Mike to the team, so the he can
commit the patch?
sorry for the late reply; sure go ahead,
Welcome to the team, Mike! :)
does Mike need a sponsor for the upload?
I believe he does.
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se is usually a bad
idea!)
* Provide patches for these bugs:
http://udd.debian.org/cgi-bin/python_bugs.cgi
(Not necessarily all of them at once. ;P)
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* Jakub Wilk , 2013-06-18, 20:31:
1. Just "Recommends: python3-pyicu" and rely the package is coming
sometime
I've been doing this for my packages (with s/pyicu/$somethingelse/ of
course).
Though that works only if you can predict the package name. And I
believe the Ubu
too.
3. This way:
http://raphaelhertzog.com/2010/09/27/different-dependencies-between-debian-and-ubuntu-but-common-source-package/
I don't see how is that better that 1 or 2. It hides the problem rather
than fixing it.
4. ???
Ping the maintainer? #671361
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you adding
yourself to Uploaders.
[...]
I suggest starting to work on it in SVN immediately,
I've added Neil Muller to the team. Welcome!
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ed
upstream in Pydap 3.1.)
Sandro, are you okay with me adding Mike to the team, so the he can
commit the patch?
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Archive: htt
nges you want, so I'm mentioning it here only as word of
advice for the future. :)
Right now I've sent a request to join the team on alioth (login:
emillon-guest)
Welcome to the team!
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(I don't intend to sponsor this package.)
* Dmitry Shachnev , 2013-06-08, 15:06:
* Run upstream testsuite during build;
Typo in the variable name: $(PYTHON) -> $(PYTHON2).
Also, "python2.X -m unittest discover" works only for X>=7.
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version, I hope we get rid of it soon.)
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* Jakub Wilk , 2013-06-05, 00:55:
Would anyone mind if I made a mass-commit to drop them from the
packages (co-)maintained by DPMT?
Done! (With the exception of python-reportlab, which hasn't seen VCS
updates since 2008, despite numerous uploads.)
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* Scott Kitterman , 2013-06-06, 12:46:
Did anyone file bugs for jwilk's FTBFS TODO packages?
I've file them all, with one exception:
I couldn't reproduce nuitka's FTBFS in a different build environment.
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python-astropy needs fixed Numpy
mpi4py, pystemmer, python-llfuse are OK
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Archive: http://lists.debian.org/20130606170405.gb6...@jwilk.net
on-type
usr/share/pyshared/fabulous/logs.py:86
x: python-fabulous: except-without-exception-type
usr/share/pyshared/fabulous/utils.py:95
x: python-fabulous: except-without-exception-type
usr/share/pyshared/fabulous/xterm256.py:104
Patched and reported upstream.
Now it emits:
ly still occur. Please consider dropping these obsolete relations
from your packages.
Would anyone mind if I made a mass-commit to drop them from the packages
(co-)maintained by DPMT?
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A Mennucc1
pygame (U)
Alain Leufroy
xmldiff (U)
Alexander Wirt
eyed3
rr
* Cornelius Kölbel , 2013-05-27, 17:30:
Although I am calling a
update-python-modules
in the postinst, the package is not available, yet.
Do you have any tricks for this scenario?
If you're using python-support, you want to read its README, section
"Namespace packages".
arguments. That's
not what assert is for.
[...]
(These should be converted into TypeErrors, right?)
Right.
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Archive
then with non-default Python interpreter easily;
- write a wrapper script that execfile()s the original script.
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(--install-data) it doesn't store that location
anywhere, so the code has no way of knowing where the data could be.
In practice it means that you have to either patch the code that loads
the data, or add symlinks pointing from old to new locations.
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