Re: [Math] Toward releasing 3.0 ?

2012-02-29 Thread Gilles Sadowski
[...] With  gpg.passphrasePass phrase in clear text/gpg.passphrase it works; whereas with  gpg.passphrase{dwQBDCzUlr8Hb4JOieNAAhzWzTT0Gnmy5yOayp6W4CpbnGsVQrii/bcwDRjwYx9U}/gpg.passphrase it doesn't. Just re-checked, and it seems that Maven only supports password encryption for

Re: [Math] Toward releasing 3.0 ?

2012-02-29 Thread sebb
On 29 February 2012 18:35, Gilles Sadowski gil...@harfang.homelinux.org wrote: [...] With  gpg.passphrasePass phrase in clear text/gpg.passphrase it works; whereas with  gpg.passphrase{dwQBDCzUlr8Hb4JOieNAAhzWzTT0Gnmy5yOayp6W4CpbnGsVQrii/bcwDRjwYx9U}/gpg.passphrase it doesn't.

Re: [Math] Toward releasing 3.0 ?

2012-02-28 Thread Gilles Sadowski
[...] I think that this, indeed, did not test the use of the encrypted password for login. To test the login encryption, I suggest you try deploying a snapshot release instead (e.g. install from trunk, which should remain a snapshot). This command $ mvn clean deploy -Prelease

Re: [Math] Toward releasing 3.0 ?

2012-02-28 Thread sebb
On 28 February 2012 10:36, Gilles Sadowski gil...@harfang.homelinux.org wrote: [...] I think that this, indeed, did not test the use of the encrypted password for login. To test the login encryption, I suggest you try deploying a snapshot release instead (e.g. install from trunk, which

Re: [Math] Toward releasing 3.0 ?

2012-02-28 Thread Gilles Sadowski
[...] I think that this, indeed, did not test the use of the encrypted password for login. To test the login encryption, I suggest you try deploying a snapshot release instead (e.g. install from trunk, which should remain a snapshot). This command  $ mvn clean deploy

Re: [Math] Toward releasing 3.0 ?

2012-02-28 Thread sebb
On 29 February 2012 00:09, Gilles Sadowski gil...@harfang.homelinux.org wrote: [...] I think that this, indeed, did not test the use of the encrypted password for login. To test the login encryption, I suggest you try deploying a snapshot release instead (e.g. install from

Re: [Math] Toward releasing 3.0 ?

2012-02-27 Thread Gilles Sadowski
On Sat, Feb 25, 2012 at 12:25:49PM +, sebb wrote: On 25 February 2012 09:59, Gilles Sadowski gil...@harfang.homelinux.org wrote: Hello. How do we proceed from here in order to release 3.0? Cf. ticket MATH-746, Things to do before releasing 3.0. Sorry for being late on this.

Re: [Math] Toward releasing 3.0 ?

2012-02-27 Thread sebb
On 27 February 2012 12:27, Gilles Sadowski gil...@harfang.homelinux.org wrote: On Sat, Feb 25, 2012 at 12:25:49PM +, sebb wrote: On 25 February 2012 09:59, Gilles Sadowski gil...@harfang.homelinux.org wrote: Hello. How do we proceed from here in order to release 3.0? Cf. ticket

Re: [Math] Toward releasing 3.0 ?

2012-02-27 Thread Gilles Sadowski
I couldn't tell you now because installing maven3 implied desinstalling maven2. I've got both installed (Win XP) with no issues; I just change the PATH as needed to switch between them. It's Debian GNU/Linux here. [...] [INFO]

Re: [Math] Toward releasing 3.0 ?

2012-02-27 Thread sebb
On 27 February 2012 21:22, Gilles Sadowski gil...@harfang.homelinux.org wrote: I couldn't tell you now because installing maven3 implied desinstalling maven2. I've got both installed (Win XP) with no issues; I just change the PATH as needed to switch between them. It's Debian GNU/Linux

Re: [Math] Toward releasing 3.0 ?

2012-02-25 Thread sebb
On 25 February 2012 09:59, Gilles Sadowski gil...@harfang.homelinux.org wrote: Hello. How do we proceed from here in order to release 3.0? Cf. ticket MATH-746, Things to do before releasing 3.0. Sorry for being late on this. Can we start to talk about an expected release date? I

Re: [Math] Toward releasing 3.0 ?

2012-02-23 Thread Luc Maisonobe
Le 20/02/2012 23:26, Gilles Sadowski a écrit : Hi. Hi Gilles, How do we proceed from here in order to release 3.0? Cf. ticket MATH-746, Things to do before releasing 3.0. Sorry for being late on this. Can we start to talk about an expected release date? I guess you did a wonderful job

Re: [Math] Toward releasing 3.0 ?

2012-02-20 Thread Gilles Sadowski
Hi. How do we proceed from here in order to release 3.0? Cf. ticket MATH-746, Things to do before releasing 3.0. Can we start to talk about an expected release date? Thanks, Gilles - To unsubscribe, e-mail:

Re: [Math] Toward releasing 3.0 ?

2012-02-18 Thread Thomas Neidhart
On 02/17/2012 09:04 PM, Mikkel Meyer Andersen wrote: I am still active in theory, but in practise I unfortunately haven't contributed much lately due to high workload on my PhD. I am of course sorry for this and hope to be able to highen my activity. Regarding MATH-431, we need to discuss

Re: [Math] Toward releasing 3.0 ?

2012-02-18 Thread Sébastien Brisard
Dear all, I think 3.0 is very close at hand. Just a quick note to let you know that unfortunately, I'll be away for a week, and won't be able to help with the final brush up (if release occurs before next weekend). Best wishes, Sébastien

Re: [Math] Toward releasing 3.0 ?

2012-02-17 Thread Thomas Neidhart
Hi @all, just some status/feedback on some still open issues: - MATH-449: I have implemented (almost) all suggestions from Phil, and the code is documented and tested, so imho the issue can be resolved unless somebody has still reservations - MATH-431: the two tests were contributed by

Re: [Math] Toward releasing 3.0 ?

2012-02-17 Thread Mikkel Meyer Andersen
2012/2/17 Thomas Neidhart thomas.neidh...@gmail.com: Hi @all, just some status/feedback on some still open issues:  - MATH-449: I have implemented (almost) all suggestions from   Phil, and the code is documented and tested, so imho the issue   can be resolved unless somebody has still

Re: [Math] Toward releasing 3.0 ?

2012-02-17 Thread Gilles Sadowski
Hello. just some status/feedback on some still open issues: - MATH-449: I have implemented (almost) all suggestions from Phil, and the code is documented and tested, so imho the issue can be resolved unless somebody has still reservations You probably know best. - MATH-431: the

Re: [Math] Toward releasing 3.0 ?

2012-02-15 Thread Luc Maisonobe
Le 15/02/2012 07:32, Sébastien Brisard a écrit : Dear all, do we need to clear all Findbugs/PMD warning prior to releasing? Yes, and checkstyle too. In some cases, there are false positive which must be handled by adding the appropriate filter using specific filtering comments in the code for

Re: [Math] Toward releasing 3.0 ?

2012-02-15 Thread Gilles Sadowski
Hi. do we need to clear all Findbugs/PMD warning prior to releasing? Yes, and checkstyle too. We'll have to make an exception for BOBYQAOptimizer: I don't want to eliminate all those potential clues pointing at the needed improvements towards a clean Java implementation. If the CheckStyle

RE: [Math] Toward releasing 3.0 ?

2012-02-15 Thread Patrick Meyer
AM To: dev@commons.apache.org Subject: Re: [Math] Toward releasing 3.0 ? On Tue, Feb 14, 2012 at 01:12:50PM +0100, Thomas Neidhart wrote: On 02/14/2012 12:50 PM, Patrick Meyer wrote: I can document the StorelessCovariance addition. What is the best way to add documentation? Do I just add

Re: [Math] Toward releasing 3.0 ?

2012-02-15 Thread Thomas Neidhart
On 02/15/2012 02:41 PM, Patrick Meyer wrote: OK, I submited a patch that includes comments and documentation. Let me know if I need to write more, but I think I've covered the functionality of the classes. Hi Patrick, thanks for the patch. I have applied it together with additional code

RE: [Math] Toward releasing 3.0 ?

2012-02-15 Thread Patrick Meyer
Looks great, thanks! -Original Message- From: Thomas Neidhart [mailto:thomas.neidh...@gmail.com] Sent: Wednesday, February 15, 2012 2:28 PM To: dev@commons.apache.org Subject: Re: [Math] Toward releasing 3.0 ? On 02/15/2012 02:41 PM, Patrick Meyer wrote: OK, I submited a patch

RE: [Math] Toward releasing 3.0 ?

2012-02-14 Thread Patrick Meyer
@commons.apache.org Subject: Re: [Math] Toward releasing 3.0 ? Hi, I have seen that there are several classes that are almost undocumented: - PivotingQRDecomposition (linear) - StorelessCovariance (stat.correlation) - StorelessBivariateCovariance (stat.correlation) both seem to be quite new contributions

Re: [Math] Toward releasing 3.0 ?

2012-02-14 Thread Thomas Neidhart
On 02/14/2012 12:50 PM, Patrick Meyer wrote: I can document the StorelessCovariance addition. What is the best way to add documentation? Do I just add comments to the file and create a patch? Yes this would be fine. I have seen that there is an open issue regarding this contribution, please

Re: [Math] Toward releasing 3.0 ?

2012-02-14 Thread Sébastien Brisard
Dear all, do we need to clear all Findbugs/PMD warning prior to releasing? Sébastien - To unsubscribe, e-mail: dev-unsubscr...@commons.apache.org For additional commands, e-mail: dev-h...@commons.apache.org

Re: [Math] Toward releasing 3.0 ?

2012-02-13 Thread Thomas Neidhart
Hi, I have seen that there are several classes that are almost undocumented: - PivotingQRDecomposition (linear) - StorelessCovariance (stat.correlation) - StorelessBivariateCovariance (stat.correlation) both seem to be quite new contributions, is somebody willing to help here? Thomas

Re: [Math] Toward releasing 3.0 ?

2012-02-13 Thread Luc Maisonobe
Hi Gilles, Le 13/02/2012 12:01, Gilles Sadowski a écrit : Hello. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728) * Unit test

Re: [Math] Toward releasing 3.0 ?

2012-02-13 Thread Gilles Sadowski
Hello. MATH-698 IIUC, CMAESOptimizer deals only with either no bounds or finite bounds. (e.g. look at method encode, lines 904-914). I don't have the knowledge about the algorithm in order to know how to modify that code so that it will behave correctly when only one of the

Re: [Math] Toward releasing 3.0 ?

2012-01-28 Thread Luc Maisonobe
Le 27/01/2012 20:44, Sébastien Brisard a écrit : Hi Luc, thanks for this answer. My problem is that I do not know what getSolverAbsoluteAccuracy() should return. I see three options 1. Have getSolverAbsoluteAccuracy() throw an UnsupportedOperationException, as the solver is *never* invoked.

Re: [Math] Toward releasing 3.0 ?

2012-01-27 Thread Gilles Sadowski
Hi. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728) * Unit test coverage: at least 6 branches of the code are not explored.

Re: [Math] Toward releasing 3.0 ?

2012-01-27 Thread Sébastien Brisard
Hi It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-731 is pretty much solved, but I still need a piece of advice. Let me explain : the triangular distribution is

Re: [Math] Toward releasing 3.0 ?

2012-01-27 Thread Luc Maisonobe
Le 27/01/2012 12:48, Gilles Sadowski a écrit : Hi. Hi Gilles, It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728) * Unit test

Re: [Math] Toward releasing 3.0 ?

2012-01-27 Thread Luc Maisonobe
Le 27/01/2012 13:55, Sébastien Brisard a écrit : Hi It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-731 is pretty much solved, but I still need a piece of

Re: [Math] Toward releasing 3.0 ?

2012-01-27 Thread Sébastien Brisard
Hi Luc, thanks for this answer. My problem is that I do not know what getSolverAbsoluteAccuracy() should return. I see three options 1. Have getSolverAbsoluteAccuracy() throw an UnsupportedOperationException, as the solver is *never* invoked. 2. Return a default value, and specify in the

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Gilles Sadowski
Hi. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728) * Unit test coverage: at least 6 branches of the code are not explored. * Code

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Gilles Sadowski
Hello. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? Thanks and best regards, Gilles As far as I'm concerned, I have been concentrating recently on

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Sébastien Brisard
2012/1/26 Gilles Sadowski gil...@harfang.homelinux.org: Hello. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? Thanks and best regards, Gilles As far as

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Sébastien Brisard
Hello, Hi. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728)  * Unit test coverage: at least 6 branches of the code are not explored.

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread sebb
On 26 January 2012 14:39, Gilles Sadowski gil...@harfang.homelinux.org wrote: Hello. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? Thanks and best regards,

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Luc Maisonobe
Le 26/01/2012 15:39, Gilles Sadowski a écrit : Hello. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? Thanks and best regards, Gilles As far as I'm concerned, I

Re: [Math] Toward releasing 3.0 ?

2012-01-26 Thread Luc Maisonobe
Le 26/01/2012 15:52, Sébastien Brisard a écrit : Hello, Hi. It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? MATH-621 (see also MATH-728) * Unit test coverage:

[Math] Toward releasing 3.0 ?

2012-01-25 Thread Gilles Sadowski
Hello. Among the good resolutions for this new year 2012, there had been rumours about releasing Commons Math 3.0 around mid-January. I've been reviewing the list of open issues and postponed several issues to 3.1 (mostly because there were no patch). Pending design issues (matrix interface,

Re: [Math] Toward releasing 3.0 ?

2012-01-25 Thread Thomas Neidhart
On 01/25/2012 01:13 PM, Gilles Sadowski wrote: It thus becomes urgent to tackle the remaining blocking issues. Can we please make a list of those, and of all practical matters that prevent the preparation of the release? Hi, a release quite soon would also be appreciated from my side. As