Re: [OMPI devel] 1.5.5rc1 tested: MacOS 10.4 x86-64 hwloc build failure

2011-12-14 Thread Paul H. Hargrove
On 12/13/2011 11:50 PM, Brice Goglin wrote: Le 14/12/2011 08:29, Paul H. Hargrove a écrit : I've attempted the build on MacOS 10.4 (Tiger) on x86-64, I hit the same hwloc issue I've encountered on {Free,Open,Net}BSD. The build fails with CCLD opal_wrapper /usr/bin/ld: Undefin

[OMPI devel] 1.5.5rc1 tested: Solaris 11 hwloc link failure

2011-12-14 Thread Paul H. Hargrove
On 12/14/2011 12:04 AM, Paul H. Hargrove wrote: So, I agree w/ Brice that OMPI is getting something wrong, as evidenced by the failures to link linux-specific hwloc symbols. My reports (other than the one for RHL8) have been unfairly pointing at hwloc. -Paul -- Paul H

[OMPI devel] 1.5.5rc1: all my hwloc-related failures

2011-12-14 Thread Paul H. Hargrove
le-able (this is the v1.4 ticket) https://svn.open-mpi.org/trac/ompi/ticket/2937 They would both need to be fixed in the *immediate future* to be considered. -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department

Re: [OMPI devel] 1.5.5rc1 is out

2011-12-14 Thread Paul H. Hargrove
his is the v1.4 ticket) https://svn.open-mpi.org/trac/ompi/ticket/2937 They would both need to be fixed in the *immediate future* to be considered. -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-51

[OMPI devel] GNU Make required for OMPI 1.5.5rc1: known/intended?

2011-12-16 Thread Paul H. Hargrove
And I don't have any clue what the relation may be between that error and the version of make. -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] openmpi-1.5.5rc1 (re)tested on non-linux platforms

2011-12-16 Thread Paul H. Hargrove
y configure argument used was "--disable-io-romio" on the BSD platforms. I have slow Solaris10 boxes (1 each x86 and sparc) that I will test as time allows. -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department

[OMPI devel] openmpi-1.5.5rc1: VT-related check failures

2011-12-17 Thread Paul H. Hargrove
Solaris-10 testers on both x86 and SPARC both produced errors on included from ompi/contrib/vt/vt/extlib/otf/tests/thumbnail/thumbnail.c during "make check". This is due to the following in /usr/include/stdbool.h on Solaris 10: * Included for alignment with the ISO/IEC 9899:1999 standard. T

Re: [OMPI devel] GNU Make required for OMPI 1.5.5rc1: known/intended?

2011-12-20 Thread Paul H. Hargrove
On 12/20/2011 1:51 PM, Jeff Squyres wrote: On Dec 16, 2011, at 7:39 PM, Paul H. Hargrove wrote: I've noticed that on, for instance, FreeBSD I must compile openmpi-1.5.5rc1 with "gmake" rather than "make". I didn't see "GNU Make" listed as a build de

[OMPI devel] openmpi-1.5.1rc1: missing file when running autogen

2011-12-20 Thread Paul H. Hargrove
/Makefile.am -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] openmpi-1.5.5rc1: missing file when running autogen

2011-12-20 Thread Paul H. Hargrove
Of course that subject should have said "1.5.*5*rc1" rather than "1.5.1rc1" On 12/20/2011 3:22 PM, Paul H. Hargrove wrote: While trying to resolve the gmake-vs-bmake problem I ran autogen.sh and saw: /home/phargrov/OMPI/openmpi-1.5.5rc1/openmpi-1.5.5rc1/autogen.sh: line

Re: [OMPI devel] GNU Make required for OMPI 1.5.5rc1: known/intended?

2011-12-20 Thread Paul H. Hargrove
On 12/20/2011 2:47 PM, Paul H. Hargrove wrote: [snip] So, conclusions: 1) On line 16 of generate-asm.pl, "$1" is a typo for "$!", but is NOT the true problem. 2) Somebody who knows automake is going to have to rework the "generated/@OMPI_ASM_FILE@" target i

Re: [OMPI devel] openmpi-1.5.1rc1: missing file when running autogen

2011-12-20 Thread Paul H. Hargrove
autogen on the trunk such that this doesn't happen anyway, and c) it's a non-fatal error (and reflects correct behavior anyway -- we don't need that script run anywhere except the root). I'll add it to the list, but I don't know if it'll actually get fixed. On Dec

Re: [OMPI devel] v1.5 status / temporary delegation of RM authority

2011-12-20 Thread Paul H. Hargrove
e/all of the above issues get fixed, just so that we can do another round of testing to see how all of the issues look. 1.5.5 (final) will not be released before Jan 3, 2011. Happy holidays, everyone! -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC

[OMPI devel] missing file when running autogen - ALSO in 1.4.5rc1

2011-12-20 Thread Paul H. Hargrove
Castain wrote: You are quite correct - it was indeed missing from Makefile.am! Fixed - and thanks! On Dec 20, 2011, at 4:40 PM, Paul H. Hargrove wrote: Regardless of any other issues the referenced file does not appear in the tarball at all: $ tar tfj openmpi-1.5.5rc1.tar.bz2 | grep modify

[OMPI devel] openmpi-1.5.5rc1: 2nd gmake dependence (mostly VT)

2011-12-20 Thread Paul H. Hargrove
tlib/otf/tests/progress/Makefile.am: $(RM) *.otf *.def *.events *.marker *.otf.z *.def.z *.events.z *.marker.z -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] missing file when running autogen - ALSO in 1.4.5rc1

2011-12-20 Thread Paul H. Hargrove
at 5:10 PM, Paul H. Hargrove wrote: You are welcome. NOTE: the same issue exists in 1.4.5rc1 $ grep for-sun-fortran openmpi-1.4.5rc1/autogen.sh config/modify-configure-for-sun-fortran.pl $ tar tfj openmpi-1.4.5rc1.tar.bz2 | grep modify-configure-for-sun-fortran.pl || echo NOPE NOPE -Paul

Re: [OMPI devel] openmpi-1.5.5rc1: 2nd gmake dependence (mostly VT)

2011-12-20 Thread Paul H. Hargrove
0/2011 5:28 PM, Larry Baker wrote: I am pretty sure a literal "rm -rf" should be fine. Not necessarily. I'm not at work. But I think either -f or -r might not be legal on all Unix's (Tru64 Unix? AIX?). Larry Baker US Geological Survey 650-329-5608 ba...@usgs.gov On Dec 2

Re: [OMPI devel] openmpi-1.5.5rc1: 2nd gmake dependence (mostly VT)

2011-12-20 Thread Paul H. Hargrove
Open Grid Scheduler / Grid Engine http://gridscheduler.sourceforge.net/ Scalable Grid Engine Support Program http://www.scalablelogic.com/ Larry Baker US Geological Survey 650-329-5608 ba...@usgs.gov On Dec 20, 2011, at 5:19 PM, Paul H. Hargrove wrote: For the

[OMPI devel] autogen.sh generates broken configure on FreeBSD-8.2

2011-12-20 Thread Paul H. Hargrove
onfig/config.guess and the one that "automake --copy" wishes to install. While looking into this I also noted something "odd" in autogen.sh: Why is ompi_autoconf_version="2.59" when there is ALSO a check for 2.60 or later? Note that I don't

[OMPI devel] openmpi-1.5.5rc1: atomic_cmpset failure on Solaris10/UltraSPARC-T2

2011-12-21 Thread Paul H. Hargrove
laris.s) configure:27757: checking for atomic assembly filename configure:27764: result: atomic-sparcv9-32-solaris.s ompi_cv_asm_file=atomic-sparcv9-32-solaris.s OMPI_ASM_FILE='atomic-sparcv9-32-solaris.s' -Paul -- Paul H. Hargrove phhargr...@lbl.gov F

Re: [OMPI devel] autogen.sh generates broken configure on FreeBSD-8.2

2011-12-21 Thread Paul H. Hargrove
p the tarballs w the most recent config.sub and .guess (i.e., more recent than what comes w the most recent Autotools). -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Labor

[OMPI devel] openmpi-1.5.5rc1: tests on linux non-x86

2011-12-21 Thread Paul H. Hargrove
it *IS* possible to support armv4 and newer using linux kernel-level support. At some point the persistent Debian portability police may bug you about that :-) You can find the necessary code and configure logic in GASNet if you feel a need for it. -Paul -- Paul H. Hargrove

Re: [OMPI devel] autogen.sh generates broken configure on FreeBSD-8.2

2011-12-21 Thread Paul H. Hargrove
s issues you ran into are from te results that we return from our config.foo files or the ones from your Autotools. Sent from my phone. No type good. On Dec 21, 2011, at 8:41 AM, "Paul H. Hargrove" wrote: I only ran autogen after I had edited a Makefile.am or a .m4 file. -Paul On

Re: [OMPI devel] 1.4.5rc2 now released

2012-01-19 Thread Paul H. Hargrove
Is there a summary of fixes since rc1? Such a list would guide my retesting of the issues I reported with rc1. -Paul On 1/19/2012 9:55 AM, Jeff Squyres wrote: Please test: http://www.open-mpi.org/software/ompi/v1.4/ -- Paul H. Hargrove phhargr...@lbl.gov

[OMPI devel] 1.4.5rc2 test results

2012-01-19 Thread Paul H. Hargrove
011/12/10086.php ) as well as against 1.4.3rc1 in the past (see http://www.open-mpi.org/community/lists/devel/2010/08/8338.php ). FAIL macos-10.3/ppc Same problem as reported against 1.4.5rc1 in http://www.open-mpi.org/community/lists/devel/2011/12/10086.php I ha

Re: [OMPI devel] 1.4.5rc2 test results

2012-01-19 Thread Paul H. Hargrove
with respect to VPATH. -Paul On 1/19/2012 1:33 PM, Paul H. Hargrove wrote: Here is a report on my findings with "configure && make all && make install && make check" with ompi-1.4.5rc2. All platforms built the "self", "sm" and "tcp&quo

Re: [OMPI devel] 1.4.5rc2 now released

2012-01-19 Thread Paul H. Hargrove
Please test: http://www.open-mpi.org/software/ompi/v1.4/ -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] 1.4.5rc2 Solaris results [libtool problem]

2012-01-20 Thread Paul H. Hargrove
As promised earlier today, here are results from my Solaris platforms. Note that there are libtool-related failures below that may be worth pursuing. If necessary, access to most of my machines can be arranged for qualified persons. == GNU compilers with {C,CXX,F77,FC}FLAGS=-mcpu=v9 on SPARCs,

[OMPI devel] SOLVED: 1.4.5rc2 Solaris results [libtool problem]

2012-01-26 Thread Paul H. Hargrove
xecutables. So, I had to --disable-mpi-f77 to get things to work. That, however, is NOT an OMPI problem. -Paul On 1/19/2012 11:21 PM, Paul H. Hargrove wrote: As promised earlier today, here are results from my Solaris platforms. Note that there are libtool-related failures below that may be wort

[OMPI devel] 1.4.5rc2 testing FAILURE: icc/ia64 atomics

2012-01-26 Thread Paul H. Hargrove
Unexpected token: Unary Diez Operator at: Start .libs/atomic-asm.o - 4 error(s), 0 warning(s) make[2]: *** [atomic-asm.lo] Error 1 On 1/19/2012 9:55 AM, Jeff Squyres wrote: Please test: http://www.open-mpi.org/software/ompi/v1.4/ -- Paul H. Hargrove phharg

[OMPI devel] 1.4.5rc2 testing linux/ppc/IBM

2012-01-27 Thread Paul H. Hargrove
100316 (Advance-Toolchain-3.0) [merged from redhat/gcc-4_4-branch, 162934] gcc (GCC) 4.5.4 20110524 (Advance-Toolchain-4.0-2) [ibm/gcc-4_5-branch revision 174864] -Paul On 1/19/2012 9:55 AM, Jeff Squyres wrote: Please test: http://www.open-mpi.org/software/ompi/v1.4/ -- Paul H. Harg

Re: [OMPI devel] 1.4.5rc2 testing linux/ppc/IBM [SOLVED]

2012-01-27 Thread Paul H. Hargrove
On 1/27/2012 5:24 AM, Jeff Squyres wrote: On Jan 27, 2012, at 12:45 AM, Paul H. Hargrove wrote: On this cluster, statfs() is returning ENOENT, which is breaking opal_path_nfs(). So, these results are with test/opal/util/opal_path_nfs.c "disabled". Paul -- can you explain this a l

[OMPI devel] 1.4.5rc2 testing: Open64 and PathScale

2012-01-27 Thread Paul H. Hargrove
Paul On 1/19/2012 9:55 AM, Jeff Squyres wrote: Please test: http://www.open-mpi.org/software/ompi/v1.4/ -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National La

[OMPI devel] 1.4.5rc2 linux/ppc/xlc-{7,8,9} [3 PASS, 3 FAIL]

2012-01-30 Thread Paul H. Hargrove
While I previously reported success with xlc-11.1 on Linux for both ppc32 and ppc64 ABIs, I find that all is not perfect with earlier compilers. SUMMARY: xlc-9.0 / xlf-11.1 PASS on ILP32 ABI FAIL on LP64 ABI (details below) xlc-8.0 / xlf-10.1 PASS on ILP32 ABI PASS on

[OMPI devel] 1.4.5rc2 opal_path_nfs failure follow-up

2012-01-30 Thread Paul H. Hargrove
On 1/29/2012 9:28 PM, Paul H. Hargrove wrote: [snip] I also had to disable the opal_path_nfs test again on the POWER6 machine, even w/ the linux->__linux__ change. I will report on that when/if I can determine the cause. -Paul Following up on the opal_path_nfs test failures I repor

Re: [OMPI devel] 1.4.5rc3 released

2012-01-30 Thread Paul H. Hargrove
ry-manager into account when configuring the components of the faramework. If --without-memory-manager was given, then we really don't want any memory managers to be used. NEWS and README updated -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC

Re: [OMPI devel] 1.4.5rc3 released

2012-01-30 Thread Paul H. Hargrove
2 in the description of the group argument to MPI_COMM_CREATE. Fixes #2844: ensure to take the value of --with(out)-memory-manager into account when configuring the components of the faramework. If --without-memory-manager was given, then we really don't want any memory managers to be use

Re: [OMPI devel] 1.4.5rc3 released

2012-01-30 Thread Paul H. Hargrove
Oh, I missed a big one: 7) opal/util/path.c has "#elif defined(linux)" but XLC does not define this. This is breaking test/util/opal_pth_nfs.c See http://www.open-mpi.org/community/lists/devel/2012/01/10268.php -Paul On 1/30/2012 4:25 PM, Paul H. Hargrove wrote: In retesting I se

Re: [OMPI devel] 1.4.5rc3 released

2012-01-31 Thread Paul H. Hargrove
8) linux/mips64 hangs in either atomic_spinlock or atomic_spinlock_noinline test, depending on compiler and/or machine. On 1/30/2012 7:55 PM, Paul H. Hargrove wrote: Oh, I missed a big one: 7) opal/util/path.c has "#elif defined(linux)" but XLC does not define this. This is bre

[OMPI devel] 1.4.5rc4: opal_path_nfs() ALMOST fixed

2012-01-31 Thread Paul H. Hargrove
ld compilers README updates for the Sun compilers README updates noting systems that are no longer supported Fix assembly generation code on BSD in v1.4 -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-23

Re: [OMPI devel] 1.4.5rc4 is out

2012-01-31 Thread Paul H. Hargrove
Fix assembly generation code on BSD in v1.4 -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] 1.4.5rc4 is out

2012-01-31 Thread Paul H. Hargrove
On 1/31/2012 12:51 PM, Jeff Squyres wrote: On Jan 31, 2012, at 3:48 PM, Paul H. Hargrove wrote: 2) Must --disable-io-romio on OpenBSD Nobody has yet told me to shutup about that one, so I mention it here for completeness. Having looked only briefly at the failure, I see that it is in

[OMPI devel] 1.4.5rc4 may still require GNU Make

2012-01-31 Thread Paul H. Hargrove
/software/ompi/v1.4/ The main differences are the 8 issues that Paul Hargrove mentioned: Make v1.4 configure fail on OS X 10.3 and earlier Fix opal/util/path.c for Linux with old compilers README updates for the Sun compilers README updates noting systems that are no longer

Re: [OMPI devel] 1.4.5rc4 is out

2012-01-31 Thread Paul H. Hargrove
On 1/31/2012 1:42 PM, Jeff Squyres wrote: On Jan 31, 2012, at 4:03 PM, Paul H. Hargrove wrote: Oops -- Brad was supposed to put that in README, too. Nope, I looked: $ grep -i -e romio -e bsd openmpi-1.4.5rc4/README - Updated ROMIO to the version from MPICH2 1.0.7 Doh. :-\ OK

[OMPI devel] ROMIO build broken in 1.5.5rc1 [SOLVED]

2012-01-31 Thread Paul H. Hargrove
On 1/31/2012 1:53 PM, Paul H. Hargrove wrote: I can supply details if anybody want to work on this ahead of 1.5.5rc2, but the short report is: gmake[3]: Entering directory `/home/phargrov/OMPI/openmpi-1.5.5rc1-openbsd5-amd64/BLD/ompi/mca/io/romio/romio' Making all in include make: don&#

Re: [OMPI devel] ROMIO build broken in 1.5.5rc1 [SOLVED]

2012-01-31 Thread Paul H. Hargrove
On 1/31/2012 3:43 PM, Jeff Squyres wrote: On Jan 31, 2012, at 6:17 PM, Paul H. Hargrove wrote: I took a quick look and discovered that all the generated Makefile's under ompi/mca/io/romio/romio contain explicit MAKE=make (twice per Makefile, actually). I haven't gone back to loo

Re: [OMPI devel] RFC: Java MPI bindings

2012-02-07 Thread Paul H. Hargrove
de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel ___ devel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel ___ devel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/d

Re: [OMPI devel] RFC: Java MPI bindings

2012-02-07 Thread Paul H. Hargrove
a branch, and an RFC issued. The bindings conform to the MPI standard, and the implementation uses an existing external, third-party binding that has been tested. So I'm not sure what you are asking that hasn't already been done… On Feb 7, 2012, at 1:33 PM, Paul H. Hargrove wrote:

Re: [OMPI devel] RFC: Java MPI bindings

2012-02-07 Thread Paul H. Hargrove
7;t argue this point any further. -Paul On 2/7/2012 12:48 PM, Ralph Castain wrote: On Feb 7, 2012, at 1:43 PM, Paul H. Hargrove wrote: Forgive me if I misunderstand, but I am under the impression that the MPI Forum has not begun any standardization of MPI bindings for JAVA. Have I missed so

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-07 Thread Paul H. Hargrove
ting LD_LIBRARY_PATH. This is could either be Oracle's bug in the compiler, or a libtool problem. My report was: http://www.open-mpi.org/community/lists/devel/2012/01/10272.php -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Grou

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-07 Thread Paul H. Hargrove
On 2/7/2012 1:25 PM, Paul H. Hargrove wrote: So far I see only two problems that remain: + I can't build w/ the PGI compilers on MacOS Lion. This was previously reported in http://www.open-mpi.org/community/lists/devel/2012/01/10258.php + Building w/ Solaris Studio 12.2 or 12.3 on

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-07 Thread Paul H. Hargrove
On 2/7/2012 2:37 PM, Paul H. Hargrove wrote: + "make check" fails atomics tests using GCCFSS-4.0.4 compilers on Solaris10/SPARC Originally reported in: http://www.open-mpi.org/community/lists/devel/2012/01/10234.php This is a matter of the Sun/Oracle fork of GCC (known as GCC

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-07 Thread Paul H. Hargrove
On 2/7/2012 1:25 PM, Paul H. Hargrove wrote: I've SUCCESSFULLY retested 44 out of the 55 cpu/os/compiler/abi combinations currently on my list. I expect 9 more by the end of the day (the older/slower hosts), but two of my test hosts are down. My testing is complete for this rc: + 54

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-08 Thread Paul H. Hargrove
Add 3 more to the PASS list: linux/x86-64 open64 w/ -m32 openbsd5/amd64 llvm-gcc-2.9 (C and C++, no FORTAN) openbsd5/i386 llvm-gcc-2.9 (C and C++, no FORTAN) -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-08 Thread Paul H. Hargrove
tems are set up this way. This appears to be the default on Ubuntu (checked 3 hosts with 2 different releases). -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] 1.4.5rc5 has been released

2012-02-08 Thread Paul H. Hargrove
On 2/8/2012 11:14 AM, Paul H. Hargrove wrote: On 2/8/2012 3:25 AM, TERRY DONTJE wrote: + Building w/ Solaris Studio 12.2 or 12.3 on Linux x86-64, with "-m32" required setting LD_LIBRARY_PATH. Can the LD_LIBRARY_PATH be substituted with a rpath change in LDFLAGS of the build?

Re: [OMPI devel] btl/openib: get_ib_dev_distance doesn't see processes as bound if the job has been launched by srun

2012-02-09 Thread Paul H. Hargrove
y more to this than a need for special-casing the singleton? -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] RFC: Add "virbr0" to [btl|oob]_tcp_if_exclude?

2012-02-10 Thread Paul H. Hargrove
to exclude virbr0. So, I read the question as meaning the following: What happens when a user who doesn't know anything about virbr0 does mpirun --mca btl_tcp_if_exclude lo,eth8 And my guess is "nothing good happens". -Paul -- Paul H. Hargrove

Re: [OMPI devel] RFC: Add "virbr0" to [btl|oob]_tcp_if_exclude?

2012-02-10 Thread Paul H. Hargrove
On 2/10/2012 12:03 PM, Jeff Squyres wrote: On Feb 10, 2012, at 1:44 PM, Paul H. Hargrove wrote: Since the situation described is one where the user didn't know they could/should disable xen, it is reasonable to think they ALSO don't know they need to exclude virbr0. That&

Re: [OMPI devel] RFC: Add "virbr0" to [btl|oob]_tcp_if_exclude?

2012-02-10 Thread Paul H. Hargrove
On 2/10/2012 12:21 PM, Jeff Squyres wrote: On Feb 10, 2012, at 3:14 PM, Paul H. Hargrove wrote: + User knows nothing about xen, and thus nothing about virbr0 + User has a local-only interface (eth8 in my made up example) + User reads FAQ entry "220. How do I tell Open MPI which TCP net

Re: [OMPI devel] RFC: Add "virbr0" to [btl|oob]_tcp_if_exclude?

2012-02-10 Thread Paul H. Hargrove
Much better - at least to the extent that users actually read FAQs :-) -Paul On 2/10/2012 5:01 PM, Jeff Squyres (jsquyres) wrote: Check out #220 now; I updated it. -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department

Re: [OMPI devel] RFC: Add "virbr0" to [btl|oob]_tcp_if_exclude?

2012-02-10 Thread Paul H. Hargrove
That's probably a reflection of the status of the "Open MPI User Documentation" sub-project :-) On 2/10/2012 5:12 PM, Jeff Squyres wrote: FWIW: google analytics indicates that the FAQ and the mailing list archives are among the most heavily used sections of the web site.

Re: [OMPI devel] v1.4.5rc6 released

2012-02-11 Thread Paul H. Hargrove
for -m32 with Ubuntu/Sun compilers - refuse to configure with gccffs - LANL TLCC2 platform files -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax

[OMPI devel] 1.5.5rc2r25906 test results

2012-02-12 Thread Paul H. Hargrove
en-mpi.org/community/lists/devel/2012/01/10300.php -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] the dangers of configure probing argument counts

2012-02-14 Thread Paul H. Hargrove
rguments to ibv_create_cq], which performs exactly the sort of test I am warning against. So, I would encourage somebody to make the effort to reuse the configure logic Jeff and I developed for hwloc. In particular look for setting and use of HWLOC_STRICT_ARGS_CFLAGS in config/hwloc.m4 -

[OMPI devel] trunk build failed when configured with --disable-hwloc

2012-02-14 Thread Paul H. Hargrove
onfigured out. This is not present in the 1.5 branch configured with identical arguments. -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] trunk build failed when configured with --disable-hwloc

2012-02-14 Thread Paul H. Hargrove
On 2/14/2012 5:10 PM, Paul H. Hargrove wrote: I have configured the ompi-trunk (from last night's tarball: 1.7a1r25913) with --without-hwloc. Having done so, I see the following failure at build time: CC rmaps_rank_file_component.lo /home/hargrove/OMPI/openmpi-trunk-linux-mip

[OMPI devel] Fixes for MIPS assembly [w/ PATCHES]

2012-02-15 Thread Paul H. Hargrove
The attached patches fix three problems with the non-inline ASM for MIPS (and MIPS64EL): 1) ".set rerorder" was placed too early. This was causing loss of the SLTU instruction in the jump delay slot which follows the return instruction. Since that SLTU is used to set the return value, t

[OMPI devel] More MIPS asm patches

2012-02-15 Thread Paul H. Hargrove
On 2/14/2012 10:13 PM, Paul H. Hargrove wrote: On the linux/mips64el platform I also tried the PathScale 3.3a compilers on both branches. On both branches the atomic_*_noinline tests all PASS, which validates these patches. On trunk all the tests in test/asm are PASSing. However, the

Re: [OMPI devel] 1.5.5rc1 tested: MacOS/ppc (w/ 1 failure and a "CMR")

2012-02-15 Thread Paul H. Hargrove
previous one failed. However, here it is anyway: $ gcc -fPIC -shared pmpi_test.c -Iinclude -o libpmpi_test.dylib -Llib powerpc-apple-darwin8-gcc-4.0.1: unrecognized option '-shared' /usr/bin/ld: Undefined symbols: _MPI_Init _PMPI_Finalize collect2: ld returned 1 exit status -Paul Th

Re: [OMPI devel] trunk build failed when configured with --disable-hwloc

2012-02-15 Thread Paul H. Hargrove
confusion you report, though - just noting that it built. -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] libevent build fails when configured with --disable-hwloc

2012-02-15 Thread Paul H. Hargrove
ca/event/libevent2013/libevent2013_module.c -fPIC -DPIC -o .libs/libevent2013_module.o -Paul On 2/15/2012 1:16 PM, Paul H. Hargrove wrote: Thanks, Ralph. I am a little deficient in the autotools department. So, I will probably only be able to retest after a new trunk tarball is gener

Re: [OMPI devel] libevent build fails when configured with --disable-hwloc

2012-02-15 Thread Paul H. Hargrove
2012-02-15 14:11:25.183478598 -0800 @@ -4,7 +4,7 @@ */ #include "opal_config.h" #include "opal/constants.h" -#include "config.h" +#include "libevent/config.h" #ifdef HAVE_SYS_TYPES_H #include -Paul On 2/15/2012 1:58 PM, Paul H. Hargrove wr

[OMPI devel] opal_path_nfs test failure on NFS4 [w/ PATCH]

2012-02-15 Thread Paul H. Hargrove
7m/test/util/opal_path_nfs.c 2012-02-16 01:49:18.882418827 +0100 @@ -154,6 +154,7 @@ nfs_tmp[mount_known] = false; if (0 == strcasecmp (fs, "nfs") || +0 == strcasecmp (fs, "nfs4") || 0 == strcasecmp (fs, "lustre") ||

Re: [OMPI devel] libevent build fails when configured with --disable-hwloc

2012-02-15 Thread Paul H. Hargrove
ed it to the trunk. On Wed, Feb 15, 2012 at 2:17 PM, Paul H. Hargrove <mailto:phhargr...@lbl.gov>> wrote: The following 1-line change resolves the problem for me, and I see no potential down-side to it: --- openmpi-1.7a1r25927/opal/mca/event/libevent2013/libevent2013_m

Re: [OMPI devel] VT build failure with Clang++

2012-02-15 Thread Paul H. Hargrove
wrote: I don't know if it is a Clang bug, but here's my understanding of the problem. [...excellent description removed...] I'm not sure if this is a bug in Clang because I don't know if Clang should have tried to instantiate create(). Dmitri -- Paul H. Hargrove

Re: [OMPI devel] 1.5.5rc1 tested: MacOS/ppc (w/ 1 failure and a "CMR")

2012-02-15 Thread Paul H. Hargrove
As a point for discussion, I am going to offer a simple solution: c) Ignore this for 1.5.5 and raise the minimum MacOS version from 10.4 to 10.5 for ompi 1.6.x and 1.7.x Any strong opinions? -Paul On 2/15/2012 10:29 AM, Paul H. Hargrove wrote: I wanted to note that MacOS 10.4 on *X86* has

Re: [OMPI devel] 1.5.5rc1 tested: MacOS/ppc (w/ 1 failure and a "CMR")

2012-02-15 Thread Paul H. Hargrove
and 64 bit (x86_64), with gcc and Absoft compilers (*). -Paul On 2/15/2012 7:24 PM, Paul H. Hargrove wrote: As a point for discussion, I am going to offer a simple solution: c) Ignore this for 1.5.5 and raise the minimum MacOS version from 10.4 to 10.5 for ompi 1.6.x and 1.7.x Any stron

[OMPI devel] More on OMPI on MacOS 10.4/ppc [WORK AROUND]

2012-02-16 Thread Paul H. Hargrove
As I already discover (see http://www.open-mpi.org/community/lists/devel/2012/02/10444.php), MacOS 10.4 is NOT listed as a supported platform any longer. So, this message is really just for the archives. From "man ld" on a MacOS 10.4 system (x86 or ppc): MACOSX_DEPLOYMENT_TARGET

[OMPI devel] -fvisibility probe broken [w/ 3-line PATCH]

2012-02-16 Thread Paul H. Hargrove
1.3.2 testing where Jeff and I thought we had this issue fixed. I don't know for sure how I missed re-testing the final cut, but can only guess that I left --disable-visibility in my testing scripts. -Paul "thorough testing is a double-edged sword" Hargrove -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] btl/gm build broken on trunk

2012-02-16 Thread Paul H. Hargrove
^ Usage of btl->error_cb() appears correct on the 1.5 branch (just a visual inspection). -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] OPAL_ENABLE_FT_CR build broken in 1.5 branch

2012-02-17 Thread Paul H. Hargrove
field "sm_common_mmap" opal_crs_base_cleanup_append(self_sm_module->sm_common_mmap->map_path, false); ^ compilation aborted for /home/pcp1/phargrov/OMPI/openmpi-1.5-latest-linux-x86-gm2-icc-8.1//openmpi-1.5-latest/ompi/mca/mpool/sm/mpool_sm_module.c (code 2) -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

[OMPI devel] Solaris/SOS build failure in trunk

2012-02-17 Thread Paul H. Hargrove
enmpi-trunk-solaris10-sparcT2-ss12u2-v9//openmpi-trunk/test/util/opal_sos.c Let me know which bits are needed (config.log, opal_config.h, etc) and I'll gladly send them (but figured the entire list didn't want to see them). -Paul -- Paul H. Hargrove phhargr...@lb

[OMPI devel] excessive warnings on some BSDs [w/ PATCH]

2012-02-17 Thread Paul H. Hargrove
k until 1.6) -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900 --- openmpi-1.7a1r25944/opal/include/opal/types.h~ Fri Feb 17 12:01

Re: [OMPI devel] trunk build failure on Altix [w/ WORK AROUND]

2012-02-17 Thread Paul H. Hargrove
efined reference to `opal_timer_altix_freq' collect2: ld returned 1 exit status The configure-generated opal_config.h contains #define MCA_timer_IMPLEMENTATION_HEADER "opal/mca/timer/altix/timer_altix.h" Nothing appears to have been built in BUILDDIR/opal/mca/timer/altix. How

[OMPI devel] flex warning from flex-2.5.4

2012-02-19 Thread Paul H. Hargrove
and it mentions that the POSIX draft for LEX leaves such cases undefined. http://flex.sourceforge.net/manual/Limitations.html -Paul -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Be

Re: [OMPI devel] trunk build failure on OpenBSD-5.0 [SOLVED/PATCH]

2012-02-20 Thread Paul H. Hargrove
onent fbtl:posix can compile". -Paul -- Paul H. Hargrove phhargr...@lbl.gov <mailto:phhargr...@lbl.gov> Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900 --

[OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
k_alps.m4: AS_IF([test "$orte_check_alps_pmi_happy" == "yes" -a "$orte_without_full_support" = 0], ./config/ompi_load_platform.m4:if test "$with_platform" == "" ; then The $with_platform test breaks configure fairly early on at l

Re: [OMPI devel] Fwd: [OMPI users] WEXITSTATUS: OpenMPI 1.5.5 RC1 doesn't build on NetBSD (and perhaps other BSDs)

2012-02-20 Thread Paul H. Hargrove
evel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] [EXTERNAL] Re: trunk build failure on Altix [w/ WORK AROUND]

2012-02-20 Thread Paul H. Hargrove
't. We added yet another macro to handle issues like this, so it was a fairly easy fix. Thanks, Brian On 2/17/12 4:26 PM, "Paul H. Hargrove" wrote: I've poked enough at the ompi configure magic to *think* I understand the source of the problem I've seen

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
NFIG_SHELL=dash dash [path_to]/configure [options] -Paul On 2/20/2012 5:42 AM, Jeffrey Squyres wrote: Fixed -- thanks! On Feb 20, 2012, at 4:11 AM, Paul H. Hargrove wrote: Please note that "==" is NOT a portable binary operator for the "test" utility. It is supported on

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
and I suspect that is the new problem I am hitting. I hope to know soon. -Paul On 2/20/2012 12:41 PM, Jeffrey Squyres wrote: grep == configure | grep test only shows one more. I found it in config/ompi_load_platform.m4 and fixed it on the trunk. On Feb 20, 2012, at 3:38 PM, Paul H. Harg

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
slowlaris10 results. NOTE: this is NOT present in the v1.5 branch (no cmr is required). -Paul On 2/20/2012 12:46 PM, Jeffrey Squyres wrote: Ah, ok. On Feb 20, 2012, at 3:45 PM, Paul H. Hargrove wrote: Jeff, The one in config/ompi_load_platform.m4 was on my original hit-list. Getting PAST th

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
Argh!! I am now trying to track down "expr: Paren problem" on Solaris. The dash shell on Linux doesn't reproduce this one, unfortunately. -Paul On 2/20/2012 1:12 PM, Paul H. Hargrove wrote: I'll report back ASAP on my slowlaris10 results. -- Paul H. Hargrove

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
testing. Even using /bin/sh, I saw no other "odd" behaviors with configure on Solaris-10. -Paul On 2/20/2012 1:16 PM, Paul H. Hargrove wrote: Argh!! I am now trying to track down "expr: Paren problem" on Solaris. The dash shell on Linux doesn't reproduce this one, un

Re: [OMPI devel] non-portable test operator in configure

2012-02-20 Thread Paul H. Hargrove
For those keeping score at home, that should have said "/usr/ucb" instead of "/usr/ucb/bin". I make mistakes too (as Ralph's observation of breakage w/ r25966 shows quite clearly). -Paul On 2/20/2012 2:37 PM, Paul H. Hargrove wrote: Short version: The "expr: Pa

Re: [OMPI devel] [EXTERNAL] Re: [OMPI svn] svn:open-mpi r25966

2012-02-20 Thread Paul H. Hargrove
cro:). Brian -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department Tel: +1-510-495-2352 Lawrence Berkeley National Laboratory Fax: +1-510-486-6900

Re: [OMPI devel] flex warning from flex-2.5.4

2012-02-20 Thread Paul H. Hargrove
done to correct it. On Feb 19, 2012, at 8:47 PM, Paul H. Hargrove wrote: I've not checked any other systems, but building the trunk on OpenBSD and FreeBSD (w/ flex-2.5.4) I see the following: LEXshow_help_lex.c "[srcdir]/opal/util/show_help_lex.l", line 65: warning, dan

Re: [OMPI devel] flex warning from flex-2.5.4

2012-02-20 Thread Paul H. Hargrove
turn OPAL_SHOW_HELP_PARSE_TOPIC; } .*\n { BEGIN(INITIAL); } On 2/20/2012 3:26 PM, Ralph Castain wrote: My bad - didn't look closely enough. I'll take a look at it and see if there is anything we can do. On Feb 20, 2012, at 4:12 PM, Paul H. Hargrove wrote: Ralph, Are you sure this i

Re: [OMPI devel] [OMPI svn] svn:open-mpi r25966

2012-02-20 Thread Paul H. Hargrove
.@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel ___ devel mailing list de...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/devel -- Paul H. Hargrove phhargr...@lbl.gov Future Technologies Group HPC Research Department

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