Krish Paul,
Many thanks for the quick advice. I have downloaded the
mesa-libGL-6.5.1-7.2.el5.x86_64.rpm from the RH network to my desktop. However,
a smart window pops up reporting that a newer version than
/home/jjuranek/Desktop/mesa-libGL-6.5.1-7.2.el5.x86_64.rpm is already
installed. I
Dear Freesurfer,
I've been playing around with Freesurfer and monkey MR volumes, and
I'm trying to find some sort of foothold to use Freesurfer more
effectively. I have the surfaces and inflated volumes of the brain,
and I also have a bunch of sub-voxel coordinates (in the T1 volume) of
I don't understand why you got a mesa-libGL rpm and are trying to
install it? I think doing so could really mess up your system so it
is a good thing it is not letting you.
My email was about adding
Section Extensions
Option Composite Disable
EndSection
to your /etc/X11/xorg.conf
Paul,
Actually, I did follow your suggestion *first* to add the 3 lines to
X11/xorg.conf (see tailed file below). However, after reboot, the same problem
persisted. So I followed Krish's advice to look at a previous thread which
referenced the mesa-libGL-*.rpm files @ MGH.
My mistake for not
Do you see any warnings (WW) or errors (EE) in your /var/log/Xorg.0.log
file?
What does running 'glxinfo' say?
On Wed, 28 May 2008, Juranek, Jenifer wrote:
Paul,
Actually, I did follow your suggestion *first* to add the 3 lines to
X11/xorg.conf (see tailed file below). However, after
you can create a label with the coordinates, the use mri_label2label
with the --paint option to sample them to the closest surface vertex.
Two caveates:
1. You may need a new version of mri_label2label (I can get it to you if so)
2. You have to use the proper coordinates
doug
Ben Kennedy
Thanks doug, can I have a newer version? My version (mri_label2lable
--version) is stable4 and it doesn't have a --paint option.
Ben
On May 28, 2008, at 11:39 AM, Doug Greve wrote:
you can create a label with the coordinates, the use mri_label2label
with the --paint option to sample them
I've put an x64 version here:
ftp://surfer.nmr.mgh.harvard.edu/transfer/outgoing/flat/greve/mri_label2label
If that does not match your OS, then let me know
doug
Ben Kennedy wrote:
Thanks doug, can I have a newer version? My version (mri_label2lable
--version) is stable4 and it
Hi FreeSurfer Community,
I was wondering if we can extract BA6 from aseg.mgz or aparc+aseg.mgz
I noticed BA6 was added after ver 4.0.3 but when I tried mri_extract_label
aparc+aseg.mgz 406 output.mgz or mri_extract_label aseg.mgz 406
output.mgz I get empty volumes for the output.mgz.
Hi Behrang,
we have probabilistic labels for BA6, but it's a surface-based label. We
haven't quite finished getting ready to distribute it, but hopefully in the
next week or two.
cheers
Bruce
On Wed, 28 May 2008, Behrang Nosrat Makouei wrote:
Hi FreeSurfer Community,
I was wondering
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