External Email - Use Caution
Dear expert,
Thank you for reading!
I want to do these four pre-processing steps:
1. Re-sampling each MR image to 256*256*256;
2. Using the N3 algorithm for intensity inhomogeneity correction;
3. Skull stripping;
4. Removing the cerebellum.
Does
External Email - Use Caution
Hi, I am testing a new installation of freesurfer. Two errors occurred, and I'm
hoping someone can help me troubleshoot:
First, recon-all exits with error indicating that it is unable to create a
symbolic link:
[GHS\026278@vmcntdsktp10 fs_sample1]$
External Email - Use Caution
The Yale University Alzheimer’s Disease Research Unit and the Yale PET
Center has an opening for a highly qualified and motivated individual at
the post-doctoral level to work on research involving the development of
analysis techniques integrating
This is not a problem with the contrasts, it is an issue with the mask. How did
you create the mask? Can you send the full terminal output?
On 6/21/2019 6:16 PM, Francesca Pentimalli wrote:
External Email - Use Caution
Dear FreeSurfer experts,
I am trying to run mri_glmfit on a series
you can use something like
mri_concat overlay1.mgh overlay2.mgh --mean --o mean.overlay.mgh
On 6/22/2019 4:18 PM, Boris Rauchmann wrote:
> External Email - Use Caution
>
> Dear FS community,
>
> how can I create group mean tracer uptake images in surface space with FS
> from several
mri_vol2label should do the trick
cheers
Bruce
On Sat, 22 Jun 2019, Sam W. wrote:
External Email - Use Caution
Hello,
I'm trying to create label files of the aparc+aseg ROIs but cannot find the
aseg annotations. The
?h.aparc.annot does not contain subcortical regions that
External Email - Use Caution
Hello,
I'm trying to create label files of the aparc+aseg ROIs but cannot find the
aseg annotations. The ?h.aparc.annot does not contain subcortical regions
that exist in the aparc+aseg.mgz volume. Is there a way to apply
mri_annotation2label to aseg
External Email - Use Caution
Dear FS community,
how can I create group mean tracer uptake images in surface space with FS from
several overlays?
Thanks,
Boris
Von meinem iPhone gesendet
___
Freesurfer mailing list
I don't know. There is no way for me to answer that. It depends on the
signal-to-noise of each of the modalities. You'll probably have to experiment a
bit
On 6/22/2019 8:08 AM, Matthieu Vanhoutte wrote:
External Email - Use Caution
I effectively smoothed both modalities the same
Hi Sierra,
the long command should be
recon-all -long C002d C002.base -mprage …..
same way as you called it the first time when using the -all flag.
Best, Martin
> On 8. Jun 2019, at 20:28, Sierra Ann Jarvis wrote:
>
> External Email - Use Caution
>
>
> Hello
Hi Adam,
the longitudinal registration should not care, but the regular stream would
like to have the skull in the image. This will help for a couple steps (full
head talairach registration -> eTIV etc).
Best, Martin
> On 5. Jun 2019, at 03:57, Adam Martersteck wrote:
>
>
External Email - Use Caution
I effectively smoothed both modalities the same amount.
The question is whether I should or not smooth before calculating
within-subject correlation?
Best,
Matthieu
Le sam. 22 juin 2019 à 02:14, Greve, Douglas N.,Ph.D. <
dgr...@mgh.harvard.edu> a
12 matches
Mail list logo