Re: [Freesurfer] Constraining analysis to ROI

2020-08-19 Thread Douglas N. Greve
The uncorrected results will be exactly the same. The corrected results should be more significant On 8/18/2020 7:44 PM, Erin Moe wrote: > External Email - Use Caution > > Hi Doug, > Thanks for the prompt reply. I did use the label option in mri_glmfit, but it > seemed to just show the

Re: [Freesurfer] Constraining analysis to ROI

2020-08-18 Thread Erin Moe
External Email - Use Caution Hi Doug, Thanks for the prompt reply. I did use the label option in mri_glmfit, but it seemed to just show the same results as the whole brain analysis but for only in the region defined by the label. When I load the sig scalar into QDEC from the

Re: [Freesurfer] Constraining analysis to ROI

2020-08-18 Thread Douglas N. Greve
No way in qdec. You can do it in mri_glmfit by specifying the --label option On 8/18/2020 4:22 PM, Erin Moe wrote: External Email - Use Caution Hello Freesurfer experts, Is there a way to constrain an analysis to a label or ROI in QDEC? I have a group analysis looking at the effect

[Freesurfer] Constraining analysis to ROI

2020-08-18 Thread Erin Moe
External Email - Use Caution Hello Freesurfer experts, Is there a way to constrain an analysis to a label or ROI in QDEC? I have a group analysis looking at the effect of inflammatory markers on thickness however, I’d like to have the analysis be constrained within an ROI rather