Re: [Freesurfer] ERROR: fast_mat2vol

2022-12-16 Thread stdp82
External Email - Use Caution I have resolved by eliminating the option -nowhiten It looks like the anatomical analysis is out of sync with the functional analysis. Is is possible that you ran the functional analysis, then edited the subject, then tried to rerun the

Re: [Freesurfer] ERROR: fast_mat2vol

2022-12-12 Thread Douglas N. Greve
It looks like the anatomical analysis is out of sync with the functional analysis. Is is possible that you ran the functional analysis, then edited the subject, then tried to rerun the analysis? If so, try running preproc-sess with -force to redo all the preprocessing. On 12/1/2022 12:45 PM,

[Freesurfer] ERROR: fast_mat2vol: szvol inconsistent with mat2d nv

2022-12-11 Thread stdp82
External Email - Use Caution I would extract the rs-fMRI timeseries from Yeo’s Network components. I’m running: preproc-sess -s ${1} -fsd rest -sliceorder up -surface self lhrh -fwhm 0 -per-run fcseed-config -wm -fcname wm.dat -fsd rest -pca -cfg wm.config fcseed-sess

[Freesurfer] ERROR: fast_mat2vol

2022-12-01 Thread stdp82
External Email - Use Caution I would extract the rs-fMRI timeseries from Yeo’s Network components. I’m running: preproc-sess -s ${1} -fsd rest -sliceorder up -surface self lhrh -fwhm 0 -per-runfcseed-config -wm -fcname wm.dat -fsd rest -pca -cfg wm.config fcseed-sess -s