80820>​
> Is the volume actually left-right reversed?
>
>
> From: freesurfer-boun...@nmr.mgh.harvard.edu
> on behalf of Lutz,Olivia (BIDMC -
> Psychiatry)
> Sent: Monday, August 20, 2018 4:55:24 PM
> To: freesurfer@nmr.mgh.harvard.edu
> Subj
day, August 20, 2018 4:55:24 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Flipped left to right hemisphere subjects
Hi Doug and Bruce,
thank you for the quick reply. As a follow-up question, we've edited our
brainmasks for a dataset and want to flip some subjec
please include previous emails so that we know what your original
question was
On 08/21/2018 11:12 AM, Lutz,Olivia (BIDMC - Psychiatry) wrote:
>
> Hi Doug,
>
>
> Yes the brainmask volume is left-right reversed as well.
>
>
> Thanks!
>
> Olivia
>
>
> ---
Hi Doug,
Yes the brainmask volume is left-right reversed as well.
Thanks!
Olivia
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Is the volume actually left-right reversed?
From: freesurfer-boun...@nmr.mgh.harvard.edu
on behalf of Lutz,Olivia (BIDMC -
Psychiatry)
Sent: Monday, August 20, 2018 4:55:24 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: Re: [Freesurfer] Flipped left to right
Hi Doug and Bruce,
thank you for the quick reply. As a follow-up question, we've edited our
brainmasks for a dataset and want to flip some subjects left to right. I found
instructions to flip the scans, however they are for the nu.mgz file
(https://surfer.nmr.mgh.harvard.edu/fswiki/LeftRightRe
To clarify, you cannot just swap the left and right results and get the
same thing as if you had analyzed the unflipped data.
On 08/14/2018 12:31 PM, Bruce Fischl wrote:
> Hi Olivia
>
> yes, the DKT (and other internal atlases) will probably have asymmetries
> Bruce
> On Tue, 14 Aug 2018, Lutz,Ol
Hi Olivia
yes, the DKT (and other internal atlases) will probably have asymmetries
Bruce
On
Tue, 14 Aug 2018, Lutz,Olivia (BIDMC - Psychiatry) wrote:
Dear Freesurfer group,
We have some scans that have been processed using Freesurfer 5.1 and the
measures have already been
extracted from t
Dear Freesurfer group,
We have some scans that have been processed using Freesurfer 5.1 and the
measures have already been extracted from the DKT atlas. We've realized that
some of the scans have been flipped left to right before proceeding through
recon-all. Assuming we cannot reprocess these
