To clarify, you cannot just swap the left and right results and get the 
same thing as if you had analyzed the unflipped data.

On 08/14/2018 12:31 PM, Bruce Fischl wrote:
> Hi Olivia
>
> yes, the DKT (and other internal atlases) will probably have asymmetries
> Bruce
> On Tue, 14 Aug 2018, Lutz,Olivia (BIDMC - Psychiatry) wrote:
>
>>
>> Dear Freesurfer group,
>>
>>
>> We have some scans that have been processed using Freesurfer 5.1 and 
>> the measures have already been
>> extracted from the DKT atlas. We've realized that some of the scans 
>> have been flipped left to right
>> before proceeding through recon-all. Assuming we cannot reprocess 
>> these scans nor upgrade to
>> Freesurfer 6.0, can we simply flip our left and 
>> right ​hemisphere measurements for the affected
>> subjects? Or does the DKT atlas incorporate left-right asymmetry in 
>> the brain?
>>
>>
>> Best,
>>
>> Olivia
>>
>>
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