Hi,
I am currently working on a project involving brain morphometry of 2 year old
children.
We are interested in segmenting the ventricle and I tried to run freesurfer
using the standard recon-all -all for a first test.
Unfortunately, freesurfer reports an error (see attached log file).
I als
.mgh.harvard.edu
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Zoellner, Frank
Gesendet: Dienstag, 9. Februar 2016 10:35
An: freesurfer@nmr.mgh.harvard.edu
Betreff: [Freesurfer] Processing of young children using Freesurfer
Hi,
I am currently working on a project involving brain morph
hmmm, this doesn't seem to have to do with your data but maybe is an
installation problem? It says it failed but doesn't give an error
message, which is unusual. Can you try just typing in directly:
cd /media/sf_cdh_ventrikel/test_002/mri
mri_nu_correct.mni --n 1 --proto-iters 1000 --distance 5
arvard.edu
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Bruce Fischl
Gesendet: Dienstag, 9. Februar 2016 14:12
An: Freesurfer support list
Betreff: Re: [Freesurfer] Processing of young children using Freesurfer
hmmm, this doesn't seem to have to do with your data but maybe is a
t/cbtm/ckm/
-Ursprüngliche Nachricht-
Von: freesurfer-boun...@nmr.mgh.harvard.edu
[mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von Zoellner, Frank
Gesendet: Dienstag, 9. Februar 2016 15:49
An: Freesurfer support list
Betreff: Re: [Freesurfer] Processing of young children using
harvard.edu] Im Auftrag von Zoellner, Frank
Gesendet: Dienstag, 9. Februar 2016 15:49
An: Freesurfer support list
Betreff: Re: [Freesurfer] Processing of young children using Freesurfer
Hi Bruce,
thanks for the reply.
Here comes the output (see attached).
I just downloaded the VM with freesurfer fr
.@nmr.mgh.harvard.edu
>> [mailto:freesurfer-boun...@nmr.mgh.harvard.edu] Im Auftrag von
>> Zoellner, Frank
>> Gesendet: Dienstag, 9. Februar 2016 15:49
>> An: Freesurfer support list
>> Betreff: Re: [Freesurfer] Processing of young children using Freesurfer
>>
>&
5117
>>> Fax: +49 (0)621 3835123
>>> Email: frank.zoell...@medma.uni-heidelberg.de
>>> Web: http://www.umm.uni-heidelberg.de/inst/cbtm/ckm/
>>>
>>>
>>> -Ursprüngliche Nachricht-
>>> Von: freesurfer-boun...@nmr.mgh.harvard.e