Re: [Freesurfer] Total brain volumes

2017-03-01 Thread Douglas Greve
See if this page will answer your questions https://surfer.nmr.mgh.harvard.edu/fswiki/MorphometryStats On 3/1/17 12:39 AM, Daniel Wen wrote: Dear Freesurfer experts, I am new to using freesurfer and was wondering if anyone could explain to me the difference in output generated by

[Freesurfer] Total brain volumes

2017-02-28 Thread Daniel Wen
Dear Freesurfer experts, I am new to using freesurfer and was wondering if anyone could explain to me the difference in output generated by BrainSegVolNotVent and BrainSegVolNotVentSurf. I am aware that BrainSegVolNotVent refers to the Brain Segmentation Volume Without Ventricles and

[Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
/2009 1:55 PM To: freesurfer@nmr.mgh.harvard.edu Subject: [Freesurfer] total brain volumes I am looking to derive total brain volume measures from the data that I have. Judging by reading previous posts, it seems that BrainSegVol in aseg.stats includes cerebellum and ventricles. Is there any way

RE: [Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
To: Dankner, Nathan (NIH/NIMH) [F] Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in BrainSegVol in the search box and hit the Text button. doug Dankner, Nathan (NIH/NIMH) [F] wrote: I

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Douglas N Greve
: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in BrainSegVol in the search box and hit the Text button. doug Dankner, Nathan (NIH/NIMH) [F] wrote: I think this may have slipped

Re: [Freesurfer] total brain volumes

2009-04-13 Thread Bruce Fischl
Greve [mailto:gr...@nmr.mgh.harvard.edu] Sent: Mon 4/13/2009 11:42 AM To: Dankner, Nathan (NIH/NIMH) [F] Cc: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes Did you look at the Brain Volume wiki page? To find it, go to our wiki and type in BrainSegVol in the search

RE: [Freesurfer] total brain volumes

2009-04-13 Thread Dankner, Nathan (NIH/NIMH) [F]
] Sent: Mon 4/13/2009 2:42 PM To: Douglas N Greve Cc: Dankner, Nathan (NIH/NIMH) [F]; freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] total brain volumes probably partial volume correction, which is a good thing to do. On Mon, 13 Apr 2009, Douglas N Greve wrote: Not having

[Freesurfer] total brain volumes

2009-04-09 Thread Dankner, Nathan (NIH/NIMH) [F]
I am looking to derive total brain volume measures from the data that I have. Judging by reading previous posts, it seems that BrainSegVol in aseg.stats includes cerebellum and ventricles. Is there any way to eliminate these from the calculation? Is it kosher to subtract the