Hi Bruce,
Thanks for the reply. Would 'bbregister' work to register the files to
eachother or would there be a more useful way to do that?
Also I noticed that across many of the subjects there is a slight
difference in the TR, TE, TI, and flip angle values.
For instance, one of the subjects has
no, it would be more like a talairach alignment
On Wed, 24 Jul 2013, Mark
Plantz wrote:
Hi Bruce,
Thanks for the reply. Would 'bbregister' work to register the files to
eachother or would there be a
more useful way to do that?
Also I noticed that across many of the subjects there is a sligh
Hi Mark
have you tried using a transform? Usually with more than one subject we
require that they be registered. I haven't looked at that code in a long
time, so I am not positive that it would fix this problem, but it might.
In any case if they aren't registered it won't generate a useful at
Hello freesurfers,
I recently ran into a problem with mri_ca_train, a function that
creates a .gca atlas from a manually segmented volume and input volume(s).
My command line is:
mri_ca_train -T1 T1.mgz CMH-11460 CMH-11461 ~/Desktop/atlas.gca
The results:
processing subject CMH-11461, 1
