Re: [Freesurfer] Problem with freeview in linux subsystem for

External Email - Use Caution Hi Falk, Thank you for the reply. Yes, I am running Xming and have set this option in the .bashrc file. I still get the same error. I have tried to research this issue extensively but cannot seem to find the answer. Thanks, Brady ___

Re: [Freesurfer] Problem with freeview in linux subsystem for windows

2019 21:51 An: Freesurfer support list Betreff: [Freesurfer] Problem with freeview in linux subsystem for windows External Email - Use Caution Hi, I am trying to run freeview in the linux subsystem (Ubuntu 18.04) for windows 10 but keep getting the following error: failed to get t

[Freesurfer] Problem with freeview in linux subsystem for windows

External Email - Use Caution Hi, I am trying to run freeview in the linux subsystem (Ubuntu 18.04) for windows 10 but keep getting the following error: failed to get the current screen resources QXcbConnection: XCB error: 170 (Unknown), sequence: 170, resource id: 90, major cod

Re: [Freesurfer] Problem with freeview

: [Freesurfer] Problem with freeview I'm not sure about the first part of the message, but "Did not find any volume geometry information in the surface" can be ignored. It is just a warning. Did the program still run? If so, you can ignore these warnings. Best, Ruopeng On Jan 4, 2

Re: [Freesurfer] Problem with freeview

I’m not sure about the first part of the message, but "Did not find any volume geometry information in the surface” can be ignored. It is just a warning. Did the program still run? If so, you can ignore these warnings. Best, Ruopeng > On Jan 4, 2017, at 6:49 PM, Jennifer Szeto wrote: > > Hi F

[Freesurfer] Problem with freeview

Hi Freesurfer Experts, I have installed Freesurfer5.3 and it seems to be working fine. However when i tried to load up the GLM analysis (after doing mris_preproc and mri_glmfit) results on freeview, i got the following message: "OpenGL warning: No pincher, please call crStateSetCurrentPointers

[Freesurfer] Problem with freeview

Hi Freesurfer Experts, I have installed Freesurfer5.3 and it seems to be working fine. However when i tried to load up the GLM analysis (after doing mris_preproc and mri_glmfit) results on freeview, i got the following message: "OpenGL warning: No pincher, please call crStateSetCurrentPoint

Re: [Freesurfer] problem with freeview

Hi Ruopeng, thank you very much! > Hi Angela, > > The issue has been fixed. It is because your annotation has 0's which is > corresponding to black color in the color table). I've made change in my > code so it doesn't display 0's. The fix will be in tomorrow's dev build. > If you are interested

Re: [Freesurfer] problem with freeview

Hi Angela, The issue has been fixed. It is because your annotation has 0's which is corresponding to black color in the color table). I've made change in my code so it doesn't display 0's. The fix will be in tomorrow's dev build. If you are interested in trying it. You can download the dev ver

Re: [Freesurfer] problem with freeview

Thanks. I can replicate the issue. I’ll look into it. Best, Ruopeng On Nov 30, 2014, at 12:45 PM, angela.fav...@unipd.it wrote: > thank you for your help > please find attached the annot file > I am using the 5.3 release > > Angela > >> Would it be possible to send us your annoy file? Are you

Re: [Freesurfer] problem with freeview

Would it be possible to send us your annoy file? Are you using the latest dev version of freeview or the one with 5.3 release? Best, Ruopeng On Nov 29, 2014, at 4:51 AM, angela.fav...@unipd.it wrote: > Hi all, > I have a problem with freeview and I am not sure about the command line to > be us

[Freesurfer] problem with freeview

Hi all, I have a problem with freeview and I am not sure about the command line to be used to view a mask. I have created an annot file and I would like to have a picture of the mask in the inflated brain with curvature. However when I use the annot file with tksurfer I am able to do so, but with f

Re: [Freesurfer] Problem with freeview

That is correct. timecourse option is only available in dev version. You can download it here: https://surfer.nmr.mgh.harvard.edu/fswiki/Download You may want to make a backup of your current freeview.bin file. Ruopeng On Jun 20, 2014, at 3:25 AM, Bernardoni, Fabio wrote: > Dear Ruopeng, >

Re: [Freesurfer] Problem with freeview

Dear Ruopeng, I didn't install it myself, but I guess it is a stable one. Are you suggesting the timecourse option might simply not be available in the stable version? thanks fabio ___ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail

Re: [Freesurfer] Problem with freeview

Hi Fabio, I don't believe the 5.1 version of freeview had that flag. The tutorial instructions are written for 5.3 version of freeview. You can download a more recent version of freeview here (under Other Downloads & Info): https://surfer.nmr.mgh.harvard.edu/fswiki/Download You may want to ma

Re: [Freesurfer] Problem with freeview

Are you running the dev version of freeview? Ruopeng On 06/19/2014 11:27 AM, Bernardoni, Fabio wrote: > Dear all, > > trying to follow the freesurfer longitudinal tutorial I encounter the > following problem. > Commands I digit in a new shell: > > ~>tcsh > ~>source $FREESURFER_HOME/SetUpFreeSurf

[Freesurfer] Problem with freeview

Dear all, trying to follow the freesurfer longitudinal tutorial I encounter the following problem. Commands I digit in a new shell: ~>tcsh ~>source $FREESURFER_HOME/SetUpFreeSurfer.csh ~>setenv SUBJECTS_DIR freesurfer_tutorial/long-tutorial/ ~>cd $SUBJECTS_DIR ~>freeview -f OAS2_0001/surf/lh.p