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Hi
FOrgot to attach the file of lh.cortex.label with my last email. Here it is.
My error message is the same as Sky's: see
http://www.mail-archive.com/freesurfer@nmr.mgh.harvard.edu/msg07271.html
Looked like there was no solution for it at the time (April 17th, 2008),
what about now
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Thanks Doug.
Do I need to rerun everything or at least rerun the average step? I went
straight into qdec but the same error message appears (after replacing
the old mri-mergelabels with the one just downloaded.
Wei Wen
Doug Greve wrote:
This may be a problem with the way that the unix
I think you can just run make_cortex_label for your average subject.
Wen, Wei wrote:
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Thanks Doug.
Do I need to rerun everything or at least rerun the average step? I
went straight into qdec but the same error message appears (after
replacing the old mri-mergelabels with the one just
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Hi Doug,
I ran make_cortex_label (that went through) for my average subject which
was mas_average and tried qdec again but still the same message:
mri_glmfit: could not parse 149955th line in
/home/wei/working/tmp/ThicknessTest/mas_average/label/lh.cortex.label
ERROR reading
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Hi Doug,
Perhaps it was this: after make_cortex_label instead of replacing the
original lh.cortex.label with this newly generated one, it creates
lh.cortex2.label. I renamed this lh.cortex2.label into
lh.cortex.label and so far so good.
Perhaps we need to regenerate the average anyway in
You might have to delete the old cortex.label
Wen, Wei wrote:
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Hi Doug,
I ran make_cortex_label (that went through) for my average subject
which was mas_average and tried qdec again but still the same message:
mri_glmfit: could not parse 149955th line in
Yes, if it finds it there, it will create the 2 instead of
overwriting. You should not have to regenerate the average, but that
should work now too.
Wen, Wei wrote:
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Hi Doug,
Perhaps it was this: after make_cortex_label instead of replacing
the original lh.cortex.label with this newly
