Re: [Freesurfer] segmentation help

urfer.nmr.mgh.harvard.edu/pub/docs/html/mri_convert >> .help.xml.html >> >> >> >> Fra: freesurfer-boun...@nmr.mgh.harvard.edu >> [freesurfer-boun...@nmr.mgh.harvard.edu] på vegne af Dilip Puri >> [dilippurip...@gmail.com] >> Sendt: 10. april 201

Re: [Freesurfer] segmentation help

urfer-boun...@nmr.mgh.harvard.edu] på vegne af Dilip Puri [dilippurip...@gmail.com] Sendt: 10. april 2017 10:02 Til: Freesurfer support list Emne: Re: [Freesurfer] segmentation help Hi all, Actually I've images in Analyze7.5 format(.img/.hdr). Can anyone help me to reconstruct('recon

Re: [Freesurfer] segmentation help

Hi Dilip you should go through our online tutorials. They explain all of this in detail. cheers Bruce On Mon, 10 Apr 2017, Dilip Puri wrote: > Hi, > > To-do "recon-all" where should I keep all the files. I mean in which > directory. What are the command lines? > > > Hope for response. > >

Re: [Freesurfer] segmentation help

Dilip Puri [dilippurip...@gmail.com] Sendt: 10. april 2017 10:02 Til: Freesurfer support list Emne: Re: [Freesurfer] segmentation help Hi all, Actually I've images in Analyze7.5 format(.img/.hdr). Can anyone help me to reconstruct('recon-all') for this format. Thanks Dilip On Mo

Re: [Freesurfer] segmentation help

> *Fra:* freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh. > harvard.edu] på vegne af Dilip Puri [dilippurip...@gmail.com] > *Sendt:* 10. april 2017 07:46 > *Til:* Freesurfer support list > *Emne:* Re: [Freesurfer] segmentation help > > Hi, > > To-do

Re: [Freesurfer] segmentation help

Nina. Fra: freesurfer-boun...@nmr.mgh.harvard.edu [freesurfer-boun...@nmr.mgh.harvard.edu] på vegne af Dilip Puri [dilippurip...@gmail.com] Sendt: 10. april 2017 07:46 Til: Freesurfer support list Emne: Re: [Freesurfer] segmentation help Hi, To-do "recon-all&q

Re: [Freesurfer] segmentation help

Hi, To-do "recon-all" where should I keep all the files. I mean in which directory. What are the command lines? Hope for response. Thanks Dilip On Sun, Apr 9, 2017 at 7:18 PM, Bruce Fischl wrote: > Hi Dilip > > you need to run your image through recon-all. > > cheers > Bruce > > On Sun, 9 A

Re: [Freesurfer] segmentation help

Hi Dilip you need to run your image through recon-all. cheers Bruce On Sun, 9 Apr 2017, Dilip Puri wrote: > Hi all, > > I've 200 analyze7.5 format images(OASIS Dataset) and I want to segment > HippoCampus. > > My input file xyz.img and output file will be like xyz_seg.img which > contains on

[Freesurfer] segmentation help

Hi all, I've 200 analyze7.5 format images(OASIS Dataset) and I want to segment HippoCampus. My input file xyz.img and output file will be like xyz_seg.img which contains only hippocampus image it like Grond Truth image for my original input image. Here is sample files including original and segm