Hi Dilip you need to run your image through recon-all.
cheers Bruce On Sun, 9 Apr 2017, Dilip Puri wrote: > Hi all, > > I've 200 analyze7.5 format images(OASIS Dataset) and I want to segment > HippoCampus. > > My input file xyz.img and output file will be like xyz_seg.img which > contains only hippocampus image it like Grond Truth image for my original > input image. > > Here is sample files including original and segmented mask link. > > Even I am very new to FREESURFER so I don't know the procedure to > reconstruct the images. > > > Kindly help me. > > _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer The information in this e-mail is intended only for the person to whom it is addressed. If you believe this e-mail was sent to you in error and the e-mail contains patient information, please contact the Partners Compliance HelpLine at http://www.partners.org/complianceline . If the e-mail was sent to you in error but does not contain patient information, please contact the sender and properly dispose of the e-mail.
