Dear Bruce!
Thanks a lot for the response. I try to get an idea about the minimal time
needed to get the subcortical volumes.
Best wishes,
Luke
> Re: [Freesurfer] subcortical segmentation only
> Bruce Fischl Wed, 10 Dec 2014 05:22:18 -0800
>
> Hi Luke
>
> you can r
Hi Luke
you can run -autorecon1 and -autorecon2 if all you care about is the aseg
(although we have tools for editing the cortical aseg labels with the
surfaces that you will not be able to use in this case)
cheers
Bruce
On Wed, 10 Dec 2014,
lukas.sch...@ukb.uni-bonn.de wrote:
>
> Hi FS-folk
Hi FS-folks!
I would like to perform a subcortical segmentation only and I am not sure
which preprocessing steps I would have to perform to achieve this goal.
So far I did always the full monty using reconall -all. Which reconall
stages are needed if only the subcortical segmentation is of intere
