[galaxy-dev] Amazon cloud setup for galaxy training

2014-09-12 Thread Anne Pajon
Dear, I am setting up with my colleague Jing an Introductory Galaxy training course at the University of Cambridge due to on the 24th September. I am looking for help on how to setup the cloud to have a smooth user experience during the workshop. Would you have any links with information to

Re: [galaxy-dev] Amazon cloud setup for galaxy training

2014-09-12 Thread Enis Afgan
Hello Anne, Overall, what we typically recommend is to launch a new instance and configure it as desired (eg, with tools, histories, and datasets of interest for the workshop). Then share that instance (using the CloudMan share-a-cluster feature http://www.biomedcentral.com/1471-2105/13/315 -

[galaxy-dev] Amazon EC2 Cloudman: Running parallel Tophats and Master node has 260% load, worker idle and at 46%

2013-02-24 Thread Brian Lin
Hi guys, I'm fairly new to cloud computing and about 2 days in to using cloudman for galaxy... I have setup a m2.4xlarge master node and flexible load for up to 4 workers of the m2.xlarge type, minimum one. I was able to upload 6 samples of paired end RNAseq-12 files, gz file sizes around 5-8 gb.

[galaxy-dev] Amazon

2012-10-31 Thread Scooter Willis
Started up a cluster on Amazon using the Launch a Galaxy Cloud Instance and got the following message. Since I don't have any control over where the instances are run not sure how I can control this. The last 4 or 5 times I have started up an existing instance has worked with no problem.

Re: [galaxy-dev] Amazon

2012-10-31 Thread Dannon Baker
For this instance, you'll need to restart using the old method for launching via the console, specifying the zone 1b. Detection of the zone volumes are in for existing clusters and specifying those for launch is on the short list of things coming up for cloud launch. On Oct 31, 2012, at

Re: [galaxy-dev] Amazon cloud formation for galaxy

2011-02-25 Thread Enis Afgan
Yeah, also that is is pretty much how CloudMan handles the infrastructure management now - it has it's own descriptor (i.e., template) and from there it handles all the provisioning and coordination of the underlying resources. Granted, having Amazon do it would add to the robustness of the