Re: [galaxy-dev] refresh_on_change is broken?

2012-05-07 Thread Jeremy Goecks
> Let me give an example of something that I do. I have the user select a file > after which I, using dynamic_options, extract the column names and present > those to the user with a select input parameter. With the selected column > name I then present a new select input parameter with all the

Re: [galaxy-dev] refresh_on_change is broken?

2012-05-07 Thread Kempenaar, M (med)
- Message: 12 Date: Fri, 23 Mar 2012 18:41:11 -0400 From: Jeremy Goecks To: Greg Von Kuster Cc: "Gubian, Sylvain" , Galaxy Dev Subject: Re: [galaxy-dev] refresh_on_change is broken? Message-ID: <302260d0-f8b3-4c09-ad59-aeb6239c8...@emory.edu> Content-Type:

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-23 Thread Jeremy Goecks
A final pointer: to see tools that use dynamic options, take a look at "Extract GFF features" and "Filter GFF dataset by feature count" Good luck, J. On Mar 22, 2012, at 12:15 PM, Greg Von Kuster wrote: > It's always best to look at examples in the code base for technical details > like this r

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-22 Thread Greg Von Kuster
It's always best to look at examples in the code base for technical details like this rather than the wiki. You probably will need a combination of a constructor along with a select list item in your tooll There are many tools that include these types of constructors that refresh the page w

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-22 Thread Leandro Hermida
Dear Greg, On Wed, Mar 21, 2012 at 3:20 PM, Greg Von Kuster wrote: > Leandro, > > For refresh_on_change to work you need a set of optional selections and a > set of refresh_on_change values, so in your example, the type should > probably be a select instead of data.  You'll also need the select l

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-21 Thread Greg Von Kuster
Leandro, For refresh_on_change to work you need a set of optional selections and a set of refresh_on_change values, so in your example, the type should probably be a select instead of data. You'll also need the select list options to be generated based on your history items (at least that's wh

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-21 Thread Leandro Hermida
Dear Jeremy, On Wed, Mar 21, 2012 at 1:37 PM, Jeremy Goecks wrote: > > Maybe we don't understand the feature in the documentation, but this > isn't the refresh_on_change functionality. In the Tophat tool XML > there are no refresh_on_change="true" attributes, you are talking > about a conditional

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-21 Thread Jeremy Goecks
> > Maybe we don't understand the feature in the documentation, but this > isn't the refresh_on_change functionality. In the Tophat tool XML > there are no refresh_on_change="true" attributes, you are talking > about a conditional tag which when changing will refresh the page in > order to expose

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-21 Thread Leandro Hermida
Dear Jeremy, On Tue, Mar 20, 2012 at 6:19 PM, Jeremy Goecks wrote: > Leandro, > > refresh_on_change is used quite a bit throughout the tool UI and appears to > work fine both on a local instance and on the public instance. E.g. look at > Tophat and change settings from 'Use Defaults' to 'Full P

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-20 Thread Jeremy Goecks
Leandro, refresh_on_change is used quite a bit throughout the tool UI and appears to work fine both on a local instance and on the public instance. E.g. look at Tophat and change settings from 'Use Defaults' to 'Full Parameter List' -- the refresh_on_change works on reload the tool with more pa

Re: [galaxy-dev] refresh_on_change is broken?

2012-03-20 Thread Leandro Hermida
Hi everyone, Sorry to ping again, having the refresh_on_change functionality not working in Galaxy has us making tool forms in ways we really don't want to, no one needs to use refresh_on_change or am I the only one that finds it's broken? We've started to look at what Galaxy is trying to do, see

[galaxy-dev] refresh_on_change is broken?

2012-02-29 Thread Leandro Hermida
Hello, Seems like the refresh_on_change functionality is broken in the latest galaxy-dist. If you apply it to an input parameter it doesn't seem to refresh the page when you change the selection of that parameter. Does anyone else also have the problem? regards, Leandro _