[galaxy-dev] how to configure sub-uri in galaxy.yml

2018-12-11 Thread Ping Luo
I am trying to configure Galaxy v18.09 wtih sub-uri. In prior 18.01, I use this configuration in conjunction with Apache rewrite rules and it works well: [filter:proxy-prefix] use = egg:PasteDeploy#prefix prefix = /msgalaxy [app:main] filter-with = proxy-prefix cookie_path = '/galaxy' In

[galaxy-dev] _remove_dead_weakref error even after deleting .venv (Galaxy 18.09)

2018-12-11 Thread Peter van Heusden
Hi there I'm trying to run Windowmasker in Galaxy and receiving the following error: "computing the genome length pass 1 pass 2 optimizing the data structure Traceback (most recent call last): File "/tools/software/galaxy/galaxy1/database/jobs/006/6476/set_metadata_bUlLkt.py", line 1, in