Bob-
You're right that that I'm having a lot of fun learning about proteins and
ligands and calculations involving their interactions on my sabbatical. I'm at
the University of Kentucky College of Pharmacy working with Chang-Guo Zhan, a
physical chemist. The group does structure based drug des
Small additions to Bob's reply:
> The cavities are totally created within Jmol. No additional program.
The command is "isosurface", with "cavity" keyword
> Animations. 100 PDB files is not a problem. You can either load them
> as one file
Or load them one file at a time, using "load append"
Hi, Jennifer. Sounds like you are having a wonderful sabbatical. (Where?)
The cavities are totally created within Jmol. No additional program.
Cavity volume. This is a very challenging concept. I have not attempted to
do this in Jmol because I am told that you really have to do it right to
have i
I just showed some of the capabilities of Jmol in group meeting for the group
where I'm doing my sabbatical. There was a lot of interest in the features of
Jmol, so I have a couple of questions. The first one is whether it would be
possible for Jmol to calculate and display volumes of the cavi
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