[Mauve-users] Exited with error code: -1073741819

2015-04-22 Thread Amarin Cogburn
Aaron, I can’t seem to get the latest version of Mauve to run on my windows laptop or workstation. I've tried alignments using two different bacterial genomes but the program exits with the same error code when writing the guide tree each time. Any input would be appreciated. Thanks. Runnin

[Mauve-users] (no subject)

2015-04-22 Thread Amarin Cogburn
Aaron, I can’t seem to get the latest version of Mauve to run on my windows laptop. The program exits with the same error code when writing the guide tree. Any input would be appreciated. Thanks. Running alignment. Executing win64\progressiveMauve --output=K12_TolC_Alignment

[Mauve-users] Tree and identity matrix

2015-04-22 Thread Norhan Mahfouz
Hi, I have been using progressive mauve for the alignment of 55 bacterial genomes ... I had a question concerning the output tree; how exactly is it constructed?? And how can I get an identity matrix based on % genome identity between the genomes as an output if I want to use that for hierarchi