Re: [Open Babel] Using Openbabel with a New Package

2019-11-10 Thread Asem Alenaizan
, 2019 at 4:59 PM Asem Alenaizan wrote: Excellent! This seems to work. A second point is that I still need to set BABEL_DATADIR to the correct path when I use the conda package in Windows, unlike in Linux and Mac. This is a minor issue but It would be convenient if users do not need to mess

Re: [Open Babel] Using Openbabel with a New Package

2019-10-02 Thread Asem Alenaizan
for your help, Asim From: Noel O'Boyle Sent: Wednesday, October 2, 2019 4:09 PM To: Asem Alenaizan Cc: Geoffrey Hutchison; openbabel-discuss@lists.sourceforge.net Subject: Re: [Open Babel] Using Openbabel with a New Package It took me a little while to figure it out, but try adding the following

Re: [Open Babel] Using Openbabel with a New Package

2019-09-29 Thread Asem Alenaizan
for Linux and Mac. Asim From: Asem Alenaizan Sent: Friday, September 27, 2019 4:06 PM To: Geoffrey Hutchison Cc: Noel O'Boyle; openbabel-discuss@lists.sourceforge.net Subject: RE: [Open Babel] Using Openbabel with a New Package Setting BABEL_LIBDIR does not fix the problem. Asim From: Geoffrey

Re: [Open Babel] Using Openbabel with a New Package

2019-09-27 Thread Asem Alenaizan
Yes, the command line, including using the force fields, works when I set the BABEL_DATADIR variable. The problem is that even when I set the BABEL_DATADIR, my C++ code does not find the force fields. Asim From: Geoffrey Hutchison Sent: Friday, September 27, 2019 3:09 PM To: Asem Alenaizan Cc

Re: [Open Babel] Using Openbabel with a New Package

2019-09-27 Thread Asem Alenaizan
, but I cannot find the force field. I also tried with newer visual studios but had the same problem. Asim From: Noel O'Boyle Sent: Thursday, September 26, 2019 4:10 PM To: Asem Alenaizan Cc: openbabel-discuss@lists.sourceforge.net Subject: Re: [Open Babel] Using Openbabel with a New Package Were

[Open Babel] Using Openbabel with a New Package

2019-09-26 Thread Asem Alenaizan
Hello, We are currently working on developing a package for predicting the structure of proto-nucleic acids. In this program, users can input arbitrary backbone structure and other parameters. Then, the program performs a conformational search over the dihedral angles of the backbone to