Re: BioRDF telcon

On Oct 24, 2011 2:14 AM, "M. Scott Marshall" wrote: > Just a quick reminder about the BioRDF Telcon tomorrow at the usual time of > 11AM EDT. Details will follow. > > -Scott > On Oct 23, 2011 1:00 PM, "M. Scott Marshall" > wrote: >

RE: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

[mailto:expression...@googlegroups.com] On Behalf Of Jim McCusker > Sent: Monday, October 17, 2011 8:30 AM > To: expression...@googlegroups.com > Cc: HCLS > Subject: Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET > > Not really, sorry. I wasn't prepared to eat lunch at

Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

Message- >> From: expression...@googlegroups.com >> [mailto:expression...@googlegroups.com] On Behalf Of Jim McCusker >> Sent: Monday, October 17, 2011 8:12 AM >> To: expression...@googlegroups.com >> Cc: HCLS >> Subject: Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM

RE: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

To: expression...@googlegroups.com > Cc: HCLS > Subject: Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET > > Looks like few of us will be able to make it. Just wanted to let folks > know that we will be open-sourcing Corvus. > > Jim > > On Mon, Oct 17, 2011 at 11:10

Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

idn't see any notice for one so i assumed not. >> >> cheers, >> michael >> >>> -Original Message- >>> From: expression...@googlegroups.com >>> [mailto:expression...@googlegroups.com] On Behalf Of Jim McCusker >>> Sent: Monday, October 1

Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

ent: Monday, October 17, 2011 8:04 AM >> To: expression...@googlegroups.com >> Cc: HCLS >> Subject: Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET >> >> Is there a BioRDF call today? Is it at 11 ET or noon ET? >> >> Jim >> >> On Mon, Oct 1

RE: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

ooglegroups.com > Cc: HCLS > Subject: Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET > > Is there a BioRDF call today? Is it at 11 ET or noon ET? > > Jim > > On Mon, Oct 10, 2011 at 7:59 AM, M. Scott Marshall > wrote: > > Here is the reminde

Re: BioRDF telcon today (1 hour later) 12PM ET / 6PM CET

Is there a BioRDF call today? Is it at 11 ET or noon ET? Jim On Mon, Oct 10, 2011 at 7:59 AM, M. Scott Marshall wrote: > Here is the reminder for today's BioRDF call: > http://www.w3.org/wiki/HCLSIG_BioRDF_Subgroup/Meetings/2011/10-10_Conference_Call > > NOTE: We are trying one hour later than u

Re: BioRDF telcon on Monday (today) at 11AM EDT / 5PM CET

Hi All, Apologies, yesterday was a National Holiday in the UK which I had forgotten about. I would like to quickly update you on what we are doing though and also to manage expectations a little. Firstly, although I would like to see more of our data in RDF there is no internal mandate for th

RE: BioRDF telcon on Monday at 11AM EDT / 5PM CET

:* Re: BioRDF telcon on Monday at 11AM EDT / 5PM CET Dear all, This is the summary of what was discussed in the bioRDF telcon today: 1. Possible overlaps with Scientific Discouse: Anita and Paolo will look into our the bioRDF provenance of microarray experiments example and try to identify

Re: BioRDF telcon on Monday at 11AM EDT / 5PM CET

Dear all, This is the summary of what was discussed in the bioRDF telcon today: 1. Possible overlaps with Scientific Discouse: Anita and Paolo will look into our the bioRDF provenance of microarray experiments example and try to identify, with help from the bioRDF group, where the pieces of infor

Re: BioRDF telcon on Monday at 11AM EDT / 5PM CET

BioRDF reminder - the telcon is ongoing! -Scott On Thu, Apr 7, 2011 at 11:09 PM, M. Scott Marshall wrote: > Here is a reminder for Monday's BioRDF teleconference. > Jim McCusker will join us to tell us about his progress with microarray RDF. > > -Scott > > http://www.w3.org/wiki/HCLSIG_BioRDF_Su

Re: BioRDF telcon on *Tuesday* (NOT Monday) Nov. 23 at 12PM EDT (5PM UK, 6PM CET)

hi all, apologies, i'm on the road and will have to miss the call. cheers, michael - Original Message - From: "M. Scott Marshall" To: "HCLS" Sent: Friday, November 19, 2010 5:46:39 PM Subject: BioRDF telcon on *Tuesday* (NOT Monday) Nov. 23 at 12PM EDT (5PM UK, 6PM CET) Th

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/10-04_Conference_Call Thanks to Lena for scribing. M. Scott Marshall is now the new chair of BioRDF!! He will announce the next BioRDF call. Cheers, -Kei Kei Cheung wrote: This is a reminder that the n

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/09-27_Conference_Call Thanks to Simon Twigger for giving an informative presentation. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CE

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/09-13_Conference_Call Thanks to Satya for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, September 13 (see d

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/08-30_Conference_Call Thanks to Matthias for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, August 30 (see d

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/08-23_Conference_Call Thanks to Matthias for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, August 23 (see d

Re: BioRDF Telcon

The minutes for today's call are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/08-16_Conference_Call Thanks to Jun for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, August

Re: BioRDF Telcon

hi all, i'll be joining a bit late today, talk to all soon, michael - Original Message - From: "Kei Cheung" To: "HCLS" Sent: Sunday, August 15, 2010 5:53 PM Subject: BioRDF Telcon This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday,

Re: BioRDF telcon call

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/08-09_Conference_Call Thanks to Lena for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, August 9 (see detail

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/08-02_Conference_Call Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, August 2 (see details below). Cheers, -Kei ==

Re: BioRDF Telcon

hi all, regrets, traveling. cheers, michael - Original Message - From: "Kei Cheung" To: "HCLS" Sent: Saturday, July 31, 2010 6:42:57 AM Subject: BioRDF Telcon This is a reminder that the next BioRDF telcon call will be held at 11   am EDT (4 pm CET) on Monday, August

Re: BioRDF Telcon

Thanks for correcting that, Scott. I'm still not quite out of my Asian time zone. :-) -Kei is M. Scott Marshall wrote: Hi Kei, I think that 11AM EDT = 5PM CET. Cheers, Scott On Jul 31, 2010 8:26 AM, "Kei Cheung" > wrote: This is a reminder that the next BioRDF

Re: BioRDF Telcon

Hi Kei, I think that 11AM EDT = 5PM CET. Cheers, Scott On Jul 31, 2010 8:26 AM, "Kei Cheung" wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, August 2 (see details below). Cheers, -Kei == Conference Details == * Date of Call: Monday

Re: BioRDF Telcon

Dear all, I would like to add two more items to the agenda: * James Malone from ArrayExpress to talk about modelling provenance and experimental factors for ArrayExpress * Publication opportunities (All), particularly the upcoming provenance workshop in ISWC'10: http://wiki.knoesis.org/index

Re: BioRDF Telcon

The minutes for today's BioRDF call are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/06-14_Conference_Call Thanks to Matthias for scribing. Below are some excerpts of the minutes. I'll be away for the next 5 weeks. Jun has agreed to convene the BioRDF calls on June 21 a

Re: BioRDF Telcon

Small correction: At the moment, 11AM EDT is the same as 5PM CET (not 4PM). -Scott On Sun, Jun 13, 2010 at 4:03 AM, Kei Cheung wrote: > This is a reminder that the next BioRDF telcon call will be held at 11  am > EDT (4 pm CET) on Monday, June 14 (see details below). > > Jeff Grethe and Stephen

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/06-07_Conference_Call -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, June 7 (see details below). As part of the agenda, Chris B

Re: BioRDF Telcon

Chris Baker's presentation (ppt and pdf) is available at: https://transfer.med.yale.edu/upload/data/39YObdi808qV4ftL3FY1588AL5AAC2AKLpS/Baker_-_BioRDF_-_W3C_-_HCLS_Lipid-Ontology_and_Reuse_Cases.pptx https://transfer.med.yale.edu/upload/data/39YObdi808qV4ftL3FY1588AL5AAC2AKLpS/Baker_-_BioRDF_-_W

RE: BioRDF Telcon

..@w3.org [mailto:public-semweb-lifesci-requ...@w3.org] On Behalf Of mdmiller Sent: Wednesday, May 26, 2010 1:47 PM To: Kei Cheung Cc: HCLS Subject: Re: BioRDF Telcon hi kei, > Just want to clarify that what I meant was that it might be beyond the > scope of our use case to accurately, compr

Re: BioRDF Telcon

ler Sent: Wednesday, May 26, 2010 1:47 PM To: Kei Cheung Cc: HCLS Subject: Re: BioRDF Telcon hi kei, Just want to clarify that what I meant was that it might be beyond the scope of our use case to accurately, comprehensively, and precisely define what gene expression really mean give

Re: BioRDF Telcon

expression papers and the journals themselves for this cheers, michael - Original Message - From: "Kei Cheung" To: "mdmiller" Cc: "HCLS" Sent: Wednesday, May 26, 2010 7:23 AM Subject: Re: BioRDF Telcon Hi Michael, mdmiller wrote: hi kei, What do we me

Re: BioRDF Telcon

complexity involved. Cheers, -Kei cheers, michael - Original Message - From: "Kei Cheung" To: "mdmiller" Cc: "M. Scott Marshall" ; "HCLS" Sent: Tuesday, May 25, 2010 8:52 PM Subject: Re: BioRDF Telcon Hi Michael et al, What do we mea

Re: BioRDF Telcon

bably sufficient that the authors of the paper state that a gene is part of the significant gene list. cheers, michael - Original Message - From: "Kei Cheung" To: "mdmiller" Cc: "M. Scott Marshall" ; "HCLS" Sent: Tuesday, May 25, 2010 8:52 PM S

Re: BioRDF Telcon

aspect of this work forward. i'm looking forward to seeing the end results. cheers, michael - Original Message - From: "M. Scott Marshall" To: "mdmiller" Cc: "Kei Cheung" ; "HCLS" Sent: Tuesday, May 25, 2010 10:21 AM Subject: Re:

Re: BioRDF Telcon

ung" ; "HCLS" Sent: Tuesday, May 25, 2010 10:21 AM Subject: Re: BioRDF Telcon Hi Michael, Thanks for the clarification. I also explained those concepts during the BioRDF teleconference but it is difficult for the scribe to capture such details accurately from a phone conversation.

Re: BioRDF Telcon

; michael > > 1) > http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=antiepi&part=appendixes.app2 > > - Original Message ----- From: "Kei Cheung" > To: "HCLS" > Sent: Monday, May 24, 2010 11:40 AM > Subject: Re: BioRDF Telcon > > >>

Re: BioRDF Telcon

the drug do the target genes go from non-expressed to up regulated. cheers, michael 1) http://www.ncbi.nlm.nih.gov/bookshelf/br.fcgi?book=antiepi&part=appendixes.app2 - Original Message - From: "Kei Cheung" To: "HCLS" Sent: Monday, May 24, 2010 11:40 AM Subject: R

Re: BioRDF Telcon

To: "mdmiller" ; "HCLS" Sent: Saturday, May 22, 2010 12:10 PM Subject: Re: BioRDF Telcon Hi Michael, Yes, May 24 was what I meant. It was a typo. Thanks, -Kei mdmiller wrote: hi kei, do you mean monday (may 24)? cheers, michael - Original Message - From: &qu

Re: BioRDF Telcon

hi kei, look forward to joining the call, michael - Original Message - From: "Kei Cheung" To: "mdmiller" ; "HCLS" Sent: Saturday, May 22, 2010 12:10 PM Subject: Re: BioRDF Telcon Hi Michael, Yes, May 24 was what I meant. It was a typo. Thanks,

Re: BioRDF Telcon

Hi Michael, Yes, May 24 was what I meant. It was a typo. Thanks, -Kei mdmiller wrote: hi kei, do you mean monday (may 24)? cheers, michael - Original Message - From: "Kei Cheung" To: "JunZhao" Cc: Sent: Friday, May 21, 2010 2:28 PM Subject: Re: BioRDF Telco

Re: BioRDF Telcon

Since there were only Jun and Scott who attended the last BioRDF call (I was not able to attend due to some emergency meetings), we decided to have the next BioRDF call on the coming Monday (May 21) at 11 am (EDT). The agenda will be the same (see below). Cheers, -Kei JunZhao wrote: This is

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/05-03_Conference_Call Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, May 3 (see details below). Cheers, -Kei == Conf

Re: BioRDF Telcon

Jim McCusker's presentation is available at: http://prezi.com/pr7qkiw_5yk2/ -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, April 19 (see details below). Jun Zhao will convene this telcon call. Cheers, -Kei == Con

Re: BioRDF Telcon

Today's BioRDF telcon minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/04-05_Conference_Call Thanks to Jun for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, April 5

Re: BioRDF Telcon

Today's BioRDF meeting minutes are available at: http://esw.w3.org/HCLSIG_BioRDF_Subgroup/Meetings/2010/03-22_Conference_Call Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET) on Monday, March 22 (see details below). Chee

Re: BioRDF Telcon

Hi Rene Witte has developed open source Semantic Assistants to support users in content retrieval, analysis, and development, by offering context-sensitive NLP services directly integrated in standard desktop clients, like a word processor. They are implemented through an open service-oriented arc

Re: BioRDF Telcon

Don has created an initial wiki page for describing the iphone app (see the link below). http://esw.w3.org/HCLSIG_BioRDF_Subgroup_iPhone_App_Use_Case#iPhone_App_Use_Case Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (4 pm CET)

RE: BioRDF Telcon

--Original Message- > From: public-semweb-lifesci-requ...@w3.org [mailto:public-semweb- > lifesci-requ...@w3.org] On Behalf Of Kei Cheung > Sent: Monday, March 08, 2010 9:37 AM > To: HCLS > Subject: Re: BioRDF Telcon > > Today's BioRDF minutes are available at: > &

Re: BioRDF Telcon

Today's BioRDF minutes are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/03-03_Conference_Call Thanks to Matthias for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, Marc

Re: BioRDF Telcon

The minutes for today's BioRDF telcon are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/02-22_Conference_Call Thanks to Jun for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Mo

Re: BioRDF Telcon

The minutes for today's BioRDF telcon call are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/02-08_Conference_Call Thanks to Don for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET)

Re: BioRDF Telcon

The minutes for yesterday's BioRDF telcon are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/01-25_Conference_Call Thanks to Lena for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET)

Re: BioRDF Telcon

-- From: "Kei Cheung" Sent: Monday, January 04, 2010 9:42 PM To: "HCLS" Subject: Re: BioRDF Telcon Today's minutes are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/01-04_Conference_Call Cheers, -Kei Kei Cheung wrote: Happy

Re: BioRDF Telcon

/atag/ Cheers, Matthias Samwald -- From: "Kei Cheung" Sent: Monday, January 04, 2010 9:42 PM To: "HCLS" Subject: Re: BioRDF Telcon Today's minutes are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2

Re: BioRDF Telcon

Thank you Kei. I'll be there! Don On Jan 4, 2010, at 4:07 PM, Kei Cheung wrote: Hi Don, When I sent out the meeting announcement over the weekend, I didn't realize that I accidentally sent it to myself instead of the HCLS list. My apologies to you and others. Today we focused on discussi

Re: BioRDF Telcon

Hi Don, When I sent out the meeting announcement over the weekend, I didn't realize that I accidentally sent it to myself instead of the HCLS list. My apologies to you and others. Today we focused on discussing the initial structure. As we discussed in the last biordf call of 2009, it'd be i

Re: BioRDF Telcon

Today's minutes are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2010/01-04_Conference_Call Cheers, -Kei Kei Cheung wrote: Happy 2010! This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Monday, January 4 (see details below).

Re: BioRDF Telcon

year, michael - Original Message - From: "Kei Cheung" To: "mdmiller" Cc: "HCLS" Sent: Saturday, January 02, 2010 7:43 PM Subject: Re: BioRDF Telcon Hi Michael et al, As discussed during the last BioRDF, we also thought that entrez gene is a good start

Re: BioRDF Telcon

"HCLS" Sent: Monday, December 21, 2009 12:35 PM Subject: Re: BioRDF Telcon The minutes for today's BioRDF call are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/12-21_Conference_Call As we discussed during the call, I updated both th

Re: BioRDF Telcon

s, michael - Original Message - From: "Kei Cheung" To: "HCLS" Sent: Monday, December 21, 2009 12:35 PM Subject: Re: BioRDF Telcon The minutes for today's BioRDF call are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/12-

Re: BioRDF Telcon

The minutes for today's BioRDF call are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/12-21_Conference_Call As we discussed during the call, I updated both the microarray use case wiki page [1] and the provenance wiki page [2] with several example que

Re: BioRDF Telcon

Molecular Signatures Database (MSigDB): [1]: http://www.broadinstitute.org/gsea/msigdb/ cheers, michael - Original Message - From: "mdmiller" To: "Kei Cheung" Cc: "Jim McCusker" ; "Helena Deus" ; "HCLS" Sent: Thursday, December 10,

Re: BioRDF Telcon

" Sent: Thursday, December 10, 2009 6:49 AM Subject: Re: BioRDF Telcon hi kei, To me, ontologies can be used to facilitate integrated semantic queries across experiments/datasets. yes, and this is starting to become a reality. this effort, along with other HCLS initiatives are helping

Re: BioRDF Telcon

r" Cc: "Jim McCusker" ; "Helena Deus" ; "HCLS" Sent: Monday, December 07, 2009 7:32 AM Subject: Re: BioRDF Telcon mdmiller wrote: hi jim and lena, great progress! this will be a nice tool. a couple of comments. 1) i think ProtocolApplication is based seen

Re: BioRDF Telcon

Today's BioRDF minutes are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/12-07_Conference_Call Thanks to Lena and Satya for scribing. The next BioRDF telcon will be held on Dec 21. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call

Re: BioRDF Telcon

meanings. Cheers, -Kei cheers, michael Michael Miller mdmille...@comcast.net - Original Message - From: "Jim McCusker" To: "Helena Deus" Cc: "Kei Cheung" ; "mdmiller" ; "HCLS" Sent: Monday, November 30, 2009 8:19 AM Subject: Re: B

Re: BioRDF Telcon

<mailto:public-semweb-lifesci@w3.org>> <mailto:public-semweb-lifesci@w3.org <mailto:public-semweb-lifesci@w3.org> <mailto:public-semweb-lifesci@w3.org <mailto:public-semweb-lifesci@w3.org>>>>

Re: BioRDF Telcon

From: Helena Deus To: Kei Cheung Cc: mdmiller ; HCLS Sent: Wednesday, December 02, 2009 3:27 PM Subject: Re: BioRDF Telcon Hi Kei, Furtunatelly arrayexpress provides both the IDF and SDRF for that acession number, at http://www.ebi.ac.uk/microarray-as/ae/browse.html?keywords=E-GEOD

Re: BioRDF Telcon

chael - Original Message - From: Satya Sahoo To: mdmiller ; Helena Deus Cc: Kei Cheung ; HCLS Sent: Tuesday, December 01, 2009 12:36 PM Subject: Re: BioRDF Telcon Hi all, michael wrote: > what is usually missing from those documents, along with the final gene list, is how

Re: BioRDF Telcon

oo much interest or variability. >> >> what is usually missing from those documents, along with >>the final >> gene list, is how that gene list was obtained, what higher >>level >> analysis was used, that

Re: BioRDF Telcon

om: "Jim McCusker" To: "Helena Deus" Cc: "Kei Cheung" ; "mdmiller" ; "HCLS" Sent: Monday, November 30, 2009 8:19 AM Subject: Re: BioRDF Telcon I'm following a similar strategy, but have been folowing the MGED ontology where possible. I

Re: BioRDF Telcon

, is how that gene list was obtained, what higher level > analysis was used, that is generally only in the paper unfortunately. > > cheers, > michael > . > > - Original Message - From: "Kei Cheung" > > > > mail

Re: BioRDF Telcon

c-semweb-lifesci@w3.org> <mailto:public-semweb-lifesci@w3.org <mailto:public-semweb-lifesci@w3.org>>> Sent: Monday, November 23, 2009 1:27 PM Subject: Re: BioRDF Telcon Today's BioRDF minutes are a

Re: BioRDF Telcon

kei.che...@yale.edu>> To: "HCLS" mailto:public-semweb-lifesci@w3.org>> Sent: Monday, November 23, 2009 1:27 PM Subject: Re: BioRDF Telcon Today's BioRDF minutes are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/20

Re: BioRDF Telcon

ained, what higher level > analysis was used, that is generally only in the paper unfortunately. > > cheers, > michael > . > > - Original Message - From: "Kei Cheung" > > > > mailto:kei.che...

Re: BioRDF Telcon

higher level >    analysis was used, that is generally only in the paper unfortunately. > >    cheers, >    michael >    . >    - Original Message - From: "Kei Cheung" > >    mailto:kei.che...@yale.edu>> >    To: "HCLS" >  

Re: BioRDF Telcon

s at this level but it is pretty much a known art >>and usually not of too much interest or variability. >> >>what is usually missing from those documents, along with the final >>gene list, is how that gene list was obtained, what higher level >> analysis

Re: BioRDF Telcon

:helenad...@gmail.com> *To:* mdmiller <mailto:mdmille...@comcast.net> *Cc:* Kei Cheung <mailto:kei.che...@yale.edu> ; HCLS <mailto:public-semweb-lifesci@w3.org> *Sent:* Tuesday, November 24, 2009 10:06 AM *Subject:* Re: BioRDF Telcon Hi all, I apologize for m

Re: BioRDF Telcon

er level analysis was used, that is generally only in the paper unfortunately. cheers, michael . - Original Message - From: "Kei Cheung" mailto:kei.che...@yale.edu>> To: "HCLS" mailto:public-semweb-lifesci@w3.org>> Sent: Monday, Nove

Re: BioRDF Telcon

rally only in the paper unfortunately. cheers, michael . - Original Message - From: "Kei Cheung" To: "HCLS" Sent: Monday, November 23, 2009 1:27 PM Subject: Re: BioRDF Telcon Today's BioRDF minutes are available at the following: http://esw.w3.org/topic/HCLS

Re: BioRDF Telcon

the normalized processed data was reduced to the gene list. cheers, michael - Original Message - From: Helena Deus To: mdmiller Cc: Kei Cheung ; HCLS Sent: Tuesday, November 24, 2009 10:06 AM Subject: Re: BioRDF Telcon Hi all, I apologize for missing the call

Re: BioRDF Telcon

that gene list was obtained, what higher level analysis was > used, that is generally only in the paper unfortunately. > > cheers, > michael > . > - Original Message ----- From: "Kei Cheung" > To: "HCLS" > Sent: Monday, November 23, 2009 1:27 PM >

Re: BioRDF Telcon

From: "Kei Cheung" To: "HCLS" Sent: Monday, November 23, 2009 1:27 PM Subject: Re: BioRDF Telcon Today's BioRDF minutes are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/11-23_Conference_Call Thanks to Rob for scribin

Re: BioRDF Telcon

Today's BioRDF minutes are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/11-23_Conference_Call Thanks to Rob for scribing. Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5 pm CET) on Mon

Re: BioRDF Telcon

Hi Joshua, Thanks a lot for the information. In addition to BioRDF, your use case description sounds a good candidate to help align the multiple task groups of HCLS. As I understand, you may give a talk at one of the future HCLS calls. Perhaps we can discuss as a broader group to see how to c

Re: BioRDF Telcon

On the last call, I had promised to put together some notes about caBIG data sources and scenarios that might relate to the BioRDF activities. Please find those notes here: http://docs.google.com/View?id=ddjrvm2_2ckhzqxfv [image: SemanticBits LLC]

Re: BioRDF Telcon

The minutes for today's BioRDF call are available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/11-09_Conference_Call Thanks to Matthias and Eric for scribing. Cheers, -Kei Kei Cheung wrote: The BioRDF breakout update is available at the following: http://es

Re: BioRDF Telcon

The BioRDF breakout update is available at the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/QueryFederation2?action=AttachFile&do=get&target=BioRDF+Breakout+Update.pdf Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon call will be held at 11 am EDT (5

Re: BioRDF Telcon

The minutes for today's BioRDF call are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/10-12_Conference_Call Thanks to Matthias for scribing. Also, thanks to Helen for giving an informative update on Gene Expression Atlas. Cheers, -Kei Kei Cheung wrote: This is a

Re: BioRDF Telcon

The minutes for yesterday's BioRDF call are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/09-28_Conference_Call Thanks to Eric for scribing and Huajun for giving an informative presentation on TCM and Semantic Web. Cheers, -Kei Kei Cheung wrote: This is a remind

Re: BioRDF Telcon

Instead of using the regular code 4257 please use 26632 (followed by the # sign). -Kei Kei Cheung wrote: We're currently resolving a technical issue with Zakim. In the meantime, Huajun's slides can be downloaded via the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup?action=AttachF

Re: BioRDF Telcon

We're currently resolving a technical issue with Zakim. In the meantime, Huajun's slides can be downloaded via the following: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup?action=AttachFile&do=get&target=W3C-Group.ppt -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon c

Re: BioRDF Telcon

The minutes for yesterday's BioRDF call are available at: http://esw.w3.org/topic/HCLSIG_BioRDF_Subgroup/Meetings/2009/09-14_Conference_Call Cheers, -Kei Kei Cheung wrote: This is a reminder that the next BioRDF telcon. call will be held at 11 am EDT (5 pm CET) on Monday, September 14 (see de

Re: BioRDF Telcon

NIFSTD is there: http://bioportal.bioontology.org/ontologies/40510 last updated 8/18 and browsable at: http://bioportal.bioontology.org/visualize/40510 .. though because of the imports it "looks" ugly [all the name spaces show up]. All the content is there I believe. Regards, Nigam. On Tue, Sep 1,

Re: BioRDF Telcon

The latest version of NIFSTD is accessible in BioPortal at http://bioportal.bioontology.org/virtual/1084 (Note: the URL with 'virtual' will always point to the latest version). Trish On Tue, Sep 1, 2009 at 12:25 PM, Maryann Martone wrote: > It is there. I know that Fahim uploaded the latest;

RE: BioRDF Telcon

CLS; tomasz.adamus...@gmail.com > Subject: Re: BioRDF Telcon > > NCI is a good match also for microarray data, but the > overhead of using > it is high, and more errors are generated when text mining > and through > user error. We get better performance from EFO than from NCIT

RE: BioRDF Telcon

il.com; > Fahim Imam > Subject: Re: BioRDF Telcon > > It is there. I know that Fahim uploaded the latest; I don't > know if > it's exposed yet. The BIoportal has had some troubles with the > modular design, but I think most have been worked out >

Re: BioRDF Telcon

It is there. I know that Fahim uploaded the latest; I don't know if it's exposed yet. The BIoportal has had some troubles with the modular design, but I think most have been worked out On Sep 1, 2009, at 12:12 PM, Helen Parkinson wrote: Having the NIFSTD in bioportal would be ideal, we wi

  1   2   3   4   >