Testing myself on a large fasta file, I find far faster performance with
igzip, but also far lower compression rate (than gzip -6, the default).
My gzipped fasta is nearly half the size of igzip at its -3 maximum. I
haven't tried 'gzip -3' to compare that size.
This limitation seems to limit this
On Mon, Aug 17, 2020 at 8:02 AM Steven D'Aprano wrote:
> Perhaps I have misunderstood, but isn't this a pure implementation
> change, with no user visible API changes and backward compatible output?
>
According to the documentation [1], it only supports compression levels
0-3. They're supposed t
On Tue, Aug 18, 2020 at 3:00 AM Christopher Barker wrote:
>
> On Mon, Aug 17, 2020 at 8:42 AM Chris Angelico >
>> but does it have a compatible API? If it does - if you can drop it in
>>
>> and everything behaves equivalently - then it sounds like the sort of
>>
>> thing that can be included in Py
On Mon, Aug 17, 2020 at 8:42 AM Chris Angelico but does it have a compatible API? If it does - if you can drop it in
>
> and everything behaves equivalently - then it sounds like the sort of
>
> thing that can be included in Python 3.10 with minimal fuss.
I’m confused - if it is fully compatible
On Tue, Aug 18, 2020 at 1:05 AM Steven D'Aprano wrote:
>
> On Mon, Aug 17, 2020 at 04:08:54PM +0200, Stefan Behnel wrote:
>
> > I re-opened the ticket to allow for some discussion over there in order to
> > understand the implications better. But I agree that a third-party package
> > on PyPI seem
Steven D'Aprano schrieb am 17.08.20 um 17:00:
> On Mon, Aug 17, 2020 at 04:08:54PM +0200, Stefan Behnel wrote:
>
>> I re-opened the ticket to allow for some discussion over there in order to
>> understand the implications better. But I agree that a third-party package
>> on PyPI seems like a good
On Mon, Aug 17, 2020 at 04:08:54PM +0200, Stefan Behnel wrote:
> I re-opened the ticket to allow for some discussion over there in order to
> understand the implications better. But I agree that a third-party package
> on PyPI seems like a good first step, also as a backport.
Perhaps I have misun
Antoine Pitrou schrieb am 17.08.20 um 15:00:
> On Mon, 17 Aug 2020 08:49:23 -
> "Ruben Vorderman" wrote:
>> Dear python developers,
>>
>> As a bioinformatician I work a lot with gzip-compressed data. Recently I
>> discovered Intel's Storage Acceleration Libraries at
>> https://github.com/inte
On Mon, Aug 17, 2020 at 10:48 PM Ruben Vorderman
wrote:
>
> Dear python developers,
>
> As a bioinformatician I work a lot with gzip-compressed data. Recently I
> discovered Intel's Storage Acceleration Libraries at
> https://github.com/intel/isa-l. These people implemented the DEFLATE and
> IN
On Mon, 17 Aug 2020 08:49:23 -
"Ruben Vorderman" wrote:
> Dear python developers,
>
> As a bioinformatician I work a lot with gzip-compressed data. Recently I
> discovered Intel's Storage Acceleration Libraries at
> https://github.com/intel/isa-l. These people implemented the DEFLATE and
>
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