Re: [Rd] [Non-DoD Source] Re: R for the US Air Force

2024-05-16 Thread ADAMS, DOUGLAS L CIV USAF AFMC OO-ALC/OBWA via R-devel
my time here. That’s a really good idea. Thanks very much! Doug From: Josiah Parry Sent: Thursday, May 16, 2024 1:05 PM To: ADAMS, DOUGLAS L CIV USAF AFMC OO-ALC/OBWA Cc: R-devel@R-project.org Subject: [Non-DoD Source] Re: [Rd] R for the US Air Force You don't often

[Rd] R for the US Air Force

2024-05-16 Thread ADAMS, DOUGLAS L CIV USAF AFMC OO-ALC/OBWA via R-devel
Hello, The US Air Force used to have R available on our main network, but now those who need to accept it back are being very particular about what they're accepting in terms of official documentation. Would you be able to help me with this endeavor? I'm attaching a pdf that shows what

[Bioc-devel] Request to reverse package deprecation (and support pushing changes)

2023-11-09 Thread L Rutter
Good afternoon: I'm the maintainer for the Bioconductor package "bigPint", located here . I've recently tried to push changes I made to resolve ERRORS in my package by the command " git push upstream devel". However, this has

Re: [R-pkg-devel] roxygen style documentation for data sets

2023-09-21 Thread Michael L Friendly
Murdoch Sent: Thursday, September 21, 2023 3:58 PM To: Michael L Friendly ; r-package-devel@r-project.org Subject: Re: [R-pkg-devel] roxygen style documentation for data sets Hi Michael. I don't know if you're an RStudio user, but this seems ideal as the basis for an RStudio plug-in. Just

Re: [R-pkg-devel] roxygen style documentation for data sets

2023-09-21 Thread Michael L Friendly
Message- From: Ivan Krylov Sent: Thursday, September 21, 2023 1:37 PM To: Michael L Friendly Cc: r-package-devel@r-project.org Subject: Re: [R-pkg-devel] roxygen style documentation for data sets В Thu, 21 Sep 2023 16:33:35 + Michael L Friendly пишет: > I called this function `use_data_

[R-pkg-devel] roxygen style documentation for data sets

2023-09-21 Thread Michael L Friendly
I have many datasets in a some of my packages, and always used `utils::promptData()` to generate the skeleton of a man/data.Rd file. Now that I've switched to roxygen style, I have found no simple equivalent. In fact, with RStudio tools for generating documentation for functions, it is

Re: [R-pkg-devel] Problem with package containing spatial data

2023-02-09 Thread Igor L
attach using .onAttach(): > > .onAttach <- function(libname, pkgname) { > .build_internal_files() ## lazy loading of the internal data > } > > It seems to work... > > Note that .onAttach() is a standard way of defining a function that is > recognised by

[R-pkg-devel] Problem with package containing spatial data

2023-02-08 Thread Igor L
Hello all, I'm developing a package that contains spatial data about public safety in Rio de Janeiro. The problem is that when I use the usethis::use_data function which transforms the shapefile data into a file with the .rda extension, I cannot use the geometry attribute to create a map. E.g.:

Re: [R-pkg-devel] How to decrease time to import files in xlsx format?

2022-10-05 Thread Igor L
ssing that will lead to SLOWER processing if mis-used. > > On October 4, 2022 11:29:54 AM PDT, Igor L wrote: > >Hello all, > > > >I'm developing an R package that basically downloads, imports, cleans and > >merges nine files in xlsx format updated monthly from a publ

[R-pkg-devel] How to decrease time to import files in xlsx format?

2022-10-04 Thread Igor L
Hello all, I'm developing an R package that basically downloads, imports, cleans and merges nine files in xlsx format updated monthly from a public institution. The problem is that importing files in xlsx format is time consuming. My initial idea was to parallelize the execution of the

[R-pkg-devel] Non-ASCII and CRAN Checks

2022-09-19 Thread Igor L
Hello everybody, I'm testing my package with the devtools::check() function and I got a warning about found non-ASCII strings. These characters are in a dataframe and, as they are names of institutions used to filter databases, it makes no sense to translate them. Is there any way to make the

Re: [R-pkg-devel] Possible bug report/false positive

2022-01-06 Thread Igor L
Ivan, Declaring the variables inside the function solved the problem (protocolo <- X1 <- X2 <- ... X21 <- NULL). Thanks for the help and suggestions for improving the code. Best Regards, Igor Em qui., 6 de jan. de 2022 às 11:37, Ivan Krylov escreveu: > On Wed, 5 Jan 2022 17:15:20

[R-pkg-devel] Possible bug report/false positive

2022-01-06 Thread Igor L
To whom it may concern, I'm using devtools::check() and trying to upload my package to CRAN (The code is available in github ), but I'm not able to understand why the function is showing 1 NOTE: -- R CMD check results

Re: [R-pkg-devel] Cannot reproduce errors of archived CRAN package

2021-04-25 Thread Will L
implemented a workaround that avoids time stamps. On Sun, Apr 25, 2021 at 10:45 AM Will L wrote: > All, > > > I was just informed that the {targets} package was archived. > > Version 0.4-1 is still failing on macOS so it and tarchetypes have been >> archived. >> A recheck o

[R-pkg-devel] Cannot reproduce errors of archived CRAN package

2021-04-25 Thread Will L
All, I was just informed that the {targets} package was archived. Version 0.4-1 is still failing on macOS so it and tarchetypes have been > archived. > A recheck on my own Intel Mac today gives the same check ERRORs as > reported on the CRAN results page. > Do not submit again without

Re: [R-pkg-devel] Solaris CRAN check error for package {targets}

2021-01-28 Thread Will L
> On Wed, Jan 27, 2021 at 12:18 PM Rasmus Liland wrote: > > > > On 2021-01-26 21:36 -0500, Will L wrote: > > > All, > > > > > > The {targets} package shows an error > > > on CRAN when checked with Solaris: > > > > https://www.r-proj

[R-pkg-devel] Solaris CRAN check error for package {targets}

2021-01-26 Thread Will L
All, The {targets} package shows an error on CRAN when checked with Solaris: https://www.r-project.org/nosvn/R.check/r-patched-solaris-x86/targets-00check.html. The traceback points to to testthat::skip_if_not_installed("clustermq"). At first I thought this was a race condition ({clustermq} in

Re: [R-pkg-devel] CRAN packages suggesting other packages but not using them conditionally

2020-12-12 Thread Michael L Friendly
: Saturday, December 12, 2020 12:46 PM To: Michael L Friendly Cc: r-package-devel@R-project.org; Prof Brian Ripley Subject: Re: [R-pkg-devel] CRAN packages suggesting other packages but not using them conditionally On 12 December 2020 at 16:24, Michael L Friendly wrote: | I got the email below

Re: [R-pkg-devel] CRAN packages suggesting other packages but not using them conditionally

2020-12-12 Thread Michael L Friendly
I got the email below concerning 3 of my packages but wonder if they are false alarms or if not, how to locate & fix the problem. This concerns packages: ... Suggested packages should be used conditionally: see �1.1.3.1 of 'Writing R Extensions'. Some of these are hard to install on a

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-20 Thread L Rutter
ease than nitesh > is right and it would be better to do that and follow his commands he sent > earlier. > > Get Outlook for Android <https://aka.ms/ghei36> > > -- > *From:* L Rutter > *Sent:* Sunday, March 15, 2020 11:03:42 PM > *To:* Sheph

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-15 Thread L Rutter
5, 2020 4:59:14 PM > *To:* Turaga, Nitesh ; L Rutter < > lindsayannerut...@gmail.com> > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11) > > Hello, > > Nitesh I disagree. Given this is a bug correction and the release ve

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-15 Thread L Rutter
gt; > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* L Rutter > *Sent:* Wednesday, March 11, 2020 4:05 AM > *To:* Shepherd, Lori > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] R CMD build error for 3.10 (but not

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-11 Thread L Rutter
rd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* L Rutter > *Sent:* Tuesday, March 10, 2020 4:11 AM > *To:

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-10 Thread L Rutter
<<. you delete those >and keep the changes you want to commit. Then add and commit like normal >and git should give you messages about resolving conflicts. > > > Hope this helps. Let me know if you run into any further trouble. > > Cheers > > > Lori Shephe

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-03-03 Thread L Rutter
stics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *From:* L Rutter > *Sent:* Tuesday, February 25, 2020 1:55 AM > *To:* Shepherd, Lori > *Cc:* bioc-devel@r-project.org > *Subject:* Re: [Bioc-devel] R CMD build erro

Re: [Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-02-24 Thread L Rutter
lease 3.10 branch. > > > > Lori Shepherd > > Bioconductor Core Team > > Roswell Park Comprehensive Cancer Center > > Department of Biostatistics & Bioinformatics > > Elm & Carlton Streets > > Buffalo, New York 14263 > -- > *F

[Bioc-devel] R CMD build error for 3.10 (but not 3.11)

2020-02-01 Thread L Rutter
a maintainer should try in this situation? Is it possible my changes were only recognized in version 3.11 but not version 3.10? Thank you for any advice you may have! Sincerely, L. Rutter [[alternative HTML version deleted]] ___ Bioc-devel@r

Re: [Rd] long vector support

2019-12-09 Thread Will L
Thank you both. I really appreciate your work developing R, and it is exciting that long vector support may be coming to writeBin(). Next time, I will come prepared with svn revision numbers to help track things down. On Sat, Dec 7, 2019 at 6:17 AM Martin Maechler wrote: > >>&

[Rd] long vector support

2019-12-06 Thread Will L
All, At first glance, a recent commit to R-devel ( https://github.com/wch/r-source/commit/2c182014ecc8c2407a89092c9162d86046bd18da) appears to be related to long vector support. But as Henrik Bengtsson points out at

Re: [Rd] Possibly broken system2 env-option

2019-03-20 Thread l o
Studying Professor Dalgaard's code a bit, here is a little hack that returns the desired result on Unix-alikes: From >* system2("echo", env = c("VAR='Hello World'"), args = c("$VAR"))* to >* system2("echo", env = c("VAR='Hello World';"), args = c("$VAR"))* Hello World That is, adding the

Re: [Rd] Patch idea: an environment variable for setting the user ID

2019-01-25 Thread Will L
AM Kurt Hornik wrote: > >>>>> Will L writes: > > > To R-devel, > > In `R CMD build`, the ID of the user is automatically inserted into the > > DESCRIPTION file, e.g. > > > Packaged: 2018-11-06 14:01:50 UTC; > > > > This is problemat

Re: [Bioc-devel] 80% of man pages must have runnable examples (package with numerous Shiny apps)

2018-11-21 Thread L Rutter
wrote: >> >> Submit with the dontrun{} and temporarily ignore the ERROR - when >> submitting please reference the explanation below. Your reviewer could >> provide more information and will decide how to proceed - generally >> examples will be run manually to check fo

[Bioc-devel] 80% of man pages must have runnable examples (package with numerous Shiny apps)

2018-11-19 Thread L Rutter
Hello all: I am planning to submit a package to Bioconductor and have one last item from BiocCheck (error, warning, note) I have been unable to resolve: ERROR: At least 80% of man pages documenting exported objects must have runnable examples. The following pages do not: plotLitreApp.Rd,

Re: [R-pkg-devel] R CMD check halts on @example in shiny::runApp()

2018-11-19 Thread L Rutter
wser. This only makes sense in interactive modus, as your app needs input > from a user before it does anything. > > So for your shiny examples, you always have to use \dontrun{}. > Cheers > Joris > > On Mon, Nov 19, 2018 at 3:14 PM L Rutter wrote: >> >> Hello

[R-pkg-devel] R CMD check halts on @example in shiny::runApp()

2018-11-19 Thread L Rutter
Hello all: R CMD check does not complete for my package and halts at the line "* checking examples ..." I suspect the halting is due to @examples hanging in certain R/foo.R files, where shiny::runApp() is called for a shiny app located in a separate directory in this type of format: appDir <-

Re: [Bioc-devel] Manually editing man/.Rd files to pass BiocCheck

2018-11-18 Thread L Rutter
Thanks for the confirmation. I will post if I do find ways to resolve this issue without manually editing the .Rd file. On Mon, Nov 19, 2018 at 12:31 AM Michael Lawrence wrote: > > On Sun, Nov 18, 2018 at 9:16 PM L Rutter wrote: > > > > Hello all: > > > > I am

[Bioc-devel] Manually editing man/.Rd files to pass BiocCheck

2018-11-18 Thread L Rutter
Hello all: I am preparing to submit a package to Bioconductor and have one note from R CMD BiocCheck that I have been unable to resolve. The note I receive is: NOTE: Consider multiples of 4 spaces for line indents, 40 lines(1%) are not. First 6 lines: man/plotClusters.Rd:8 threshVal

[Rd] Patch idea: an environment variable for setting the user ID

2018-11-11 Thread Will L
To R-devel, In `R CMD build`, the ID of the user is automatically inserted into the DESCRIPTION file, e.g. Packaged: 2018-11-06 14:01:50 UTC; This is problematic for those of us who work in corporate settings. We must not divulge our user IDs in the packages we develop and release. Jim

[Bioc-devel] Question about inclusion in upcoming bioconductor

2017-09-15 Thread Weirather, Jason L.
Dear Bioconductor Team, I had a couple of quick questions 1) Is our package set to go into the next Bioconductor if it’s made it through the submission process and we have access to the Bioconductor git repository? Is the master branch for that properly staged for the upcoming release, or do

Re: [R-pkg-devel] Problem (with complex.h?) under Microsoft Windows

2015-11-13 Thread Roebuck,Paul L
t3, double *X, int *q, int *n, double _Complex *res1, double _Complex *res2, double _Complex *res3); 12.double _Complex tmp2, prod1 = 1.0 + 0.0*_Complex_I, prod2 = 1.0 + 0.0*_Complex_I, somme = 0.0 + 0.0*_Complex_I; 13.int indbeginblocl, l, i, *vecdl, k, j; 14.double *vecsl, *mvectl, *di

Re: [R-pkg-devel] apparent S3 methods note in R CMD check

2015-06-12 Thread Roebuck,Paul L
Actually, between this and other things coming from 'R CMD check' these days, I disagree that this is reasonable at all - it's a hack at best that only fixes this particular issue. Better would be to introduce lint-like directives that turn off certain R CMD check notes/warnings at different

Re: [Rd] How best to get around shadowing of executables by system()'s prepending of directories to Windows' PATH?

2015-05-19 Thread Roebuck,Paul L
This is the code I use in my 'SuperCurve' R-Forge package: ##- ## Merge output graphs with source tiff file, save it as JPG file .mergeGraphsAndImage - function(antibody, prefix,

[Rd] [Q] Get formal arguments of my implemented S4 method

2015-01-28 Thread Roebuck,Paul L
Interrogating some (of my own) code in another package. norm.meth - getMethod(normalize, MatrixLike) message(str(norm.meth)) str(norm.meth) message(show(norm.meth@.Data)) show(norm.meth@.Data) Last show() displays this: function (object, ...) { .local - function (object, method =

Re: [Rd] [Q] Get formal arguments of my implemented S4 method

2015-01-28 Thread Roebuck,Paul L
, vs, tukey), calc.medians: TRUE, sweep.cols: calc.medians, recalc.after.sweep: sweep.cols, Š } not those of the generic: { object, Š } From: Michael Lawrence lawrence.mich...@gene.com Date: Wednesday, January 28, 2015 11:28 AM To: Roebuck,Paul L plroeb

[Rd] R CMD check, NOTEs, S4-dependent packages

2014-02-04 Thread Roebuck,Paul L
As I was running R CMD check on one of my older packages (matlab), I was attempting to fix one of the NOTEs which bitches about attempting to change the search path using require(). In my case, I am repeating a package dependency for methods package in my .onLoad() function. Can this scenario

[Rd] S4method

2012-09-28 Thread David L Lorenz
I get an error when I try to use \S4method in a usage section in an Rd file for a function. I tried to duplicate exactly how stats4 documents its method functions, but I must be missing something. Here is the top part of the Rd file: \name{xyPlot-methods} \docType{methods}

Re: [Rd] S4method

2012-09-28 Thread David L Lorenz
Martin, that was it. Thanks. Dave From: Martin Morgan mtmor...@fhcrc.org To: David L Lorenz lor...@usgs.gov Cc: r-devel@r-project.org Date: 09/28/2012 02:39 PM Subject: Re: [Rd] S4method On 09/28/2012 11:57 AM, David L Lorenz wrote: I get an error when I try to use \S4method in a usage

[Rd] Vignette question

2012-09-04 Thread David L Lorenz
All, I seem to be missing some key point about the construction of vignettes. I have created a vignette script that works fine when run interactively using Sweave. The top part of the .Rnw file is below. \documentclass{article} \parskip 3pt \parindent 30pt %\VignetteIndexEntry{Box Plot

Re: [Rd] Vignette question

2012-09-04 Thread David L Lorenz
Duncan, That does make sense. But then what does %\VignetteDepends{USGSgraphs} do if it does not actually make the library available from the temporary library tree? Dave From: Duncan Murdoch murdoch.dun...@gmail.com To: David L Lorenz lor...@usgs.gov Cc: r-devel@r-project.org Date: 09/04

[Rd] misc subdirectory

2012-08-24 Thread David L Lorenz
The utils package has a misc folder, and some other packages have folders that are not listed in the R-extensions documentation (?data?, ? demo?, ?exec?, ?inst?, ?man?, ?po?, ?src?, and ?tests?). I'd like to be able to put some ancillary data into a misc folder, but it's mere presence in the

[Rd] Anybody have a WABAC machine?

2012-08-24 Thread Roebuck,Paul L
What version of R did the following functions make their debut? packageStartupMesssage paste0 sprintf Need to update some old packages... __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] PHP escapeshellcmd() equivalent

2012-08-24 Thread Roebuck,Paul L
Not that I recall running across such, but does R natively provide something equivalent to PHP's escapeshellcmd() function to escape shell job control, wildcards, etc? __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

Re: [Rd] Suggestion: Specify default of pch in the manual

2012-08-24 Thread Roebuck,Paul L
On 8/24/12 4:50 AM, Benjamin Hofner benjamin.hof...@imbe.med.uni-erlangen.de wrote: [SNIP] And yes, I know that one can obtain the default by inspecting par() but I think for many users (especially beginneRs) this is not the first place to look for such information but the manual is. Funny,

[Rd] virus and malicious code

2012-08-06 Thread David L Lorenz
Hi, A question has come up within a user group about the possibility of viruses or other malicious code being embedded within any package served from CRAN. How much checking is done to guard against this? I do not expect any kind of response about picking up R code from any other source,

[Rd] Shared routines in a dynamic library.

2012-07-30 Thread David L Lorenz
All, I have a question about referring to a subroutine that is in a dynamic library other than the one in my current package. Let's say that I have a package foo and it has some FORTRAN code that contains the subroutines foo1 and foocommon. The package foo has an R function that calls foo1

[Rd] S4 objects in formulas

2012-07-23 Thread David L Lorenz
Hi, I have very carefully developed several S4 classes that describe censored water-quality data. I have routines for them that will support their use in data.frames and so forth. I have run into a problem when I try to use the S4 class as the response variable in a formula and try to

Re: [Rd] bug in R version 2.15.0 (2012-03-30)?

2012-05-22 Thread Roebuck,Paul L
On 5/19/12 12:22 AM, Wincent ronggui.hu...@gmail.com wrote: [SNIP] Also, is URI a typo of URL? No. It is not. http://www.w3.org/TR/uri-clarification/#uri-partitioning __ R-devel@r-project.org mailing list

Re: [Rd] How does .Fortran dqrls work?

2012-04-27 Thread David L Lorenz
Of course, what you could do is Google dqrls and get the source and documentation. That is because it is in the publically available linpack. If it were not publically available that would not work. Theoretically, all FORTRAN or C code in R should be publically available. Dave From:

Re: [Rd] [patch] giving library() a 'version' argument

2012-04-12 Thread Roebuck,Paul L
On 4/12/12 1:56 PM, Ken Williams ken.willi...@windlogics.com wrote: On April 12, 2012 1:48 PM, Paul Roebuck wrote: Not sure I follow you here. The packageVersion() method is essentially a shortcut to packageDescription(MyPackage)$Version. I generally avoid doing package upgrades in my

Re: [Rd] requesting a new SIG mailing list

2012-02-15 Thread David L Lorenz
All, Is it decided then? It does make sense to me, because much of the hydrologic work that we do is related to aquatic ecology. I am responsible for coordinating the migration to use R as the supported statistical package within the Water Mission Area of the USGS. I'd expect that many of

Re: [Rd] FORTRAN compilation error

2012-02-09 Thread David L Lorenz
appears to be the z that is inserted in from the the object file name when the .dll is created. Thanks. Dave From: Simon Urbanek simon.urba...@r-project.org To: David L Lorenz lor...@usgs.gov Cc: r-devel@r-project.org Date: 02/09/2012 09:24 AM Subject: Re: [Rd] FORTRAN compilation error On Feb 9

Re: [Rd] Canonical package directory name for JAR files?

2012-02-08 Thread Roebuck,Paul L
On 2/7/12 5:37 PM, Simon Urbanek simon.urba...@r-project.org wrote: On Feb 7, 2012, at 4:34 PM, Roebuck,Paul L wrote: We have an R package which needs to include a JAR file. Is there a canonical directory for it? rJava defines java for that purpose (see ?.jpackage). How canonical

[Rd] FORTRAN compilation error

2012-02-08 Thread David L Lorenz
I get an error when trying to compile a FORTRAN source file for use in a package that I am developing. The error, reported in 00install.out is below. * installing *source* package 'USGSstats' ... ** libs *** arch - i386 C:/PROGRA~1/R/R-214~1.1/etc/i386/Makeconf:194: warning: overriding recipe

Re: [Rd] Canonical package directory name for JAR files?

2012-02-08 Thread Roebuck,Paul L
, roughly parallel with source:pkg/src - binary:pkg/libs. Bill Dunlap Spotfire, TIBCO Software wdunlap tibco.com -Original Message- From: Simon Urbanek [mailto:simon.urba...@r-project.org] Sent: Wednesday, February 08, 2012 1:46 PM To: William Dunlap Cc: Roebuck,Paul L; R-Devel

[Rd] Canonical package directory name for JAR files?

2012-02-07 Thread Roebuck,Paul L
We have an R package which needs to include a JAR file. Is there a canonical directory for it? __ R-devel@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-devel

[Rd] DESCRIPTION Suggests entry help

2011-12-15 Thread Roebuck,Paul L
How should the Suggests entry be written in this case? Have package that supports parallel processing available for multiple R versions. Original package DESCRIPTION Suggests entry only listed 'multicore' and life was good. Since R-2.14+ includes 'parallel' package, thought I could reference

Re: [Rd] bug in rank(), order(), is.unsorted() on character vector

2011-12-08 Thread Roebuck,Paul L
On 12/8/11 3:57 AM, Hervé Pagès hpa...@fhcrc.org wrote: On 11-12-07 10:29 AM, Roebuck,Paul L wrote: Do this first and try again. R Sys.setlocale(LC_COLLATE, C) OK I see it now (in ?Sys.setlocale): Sys.setlocale(LC_COLLATE, C) # turn off locale-specific sorting

Re: [Rd] bug in rank(), order(), is.unsorted() on character vector

2011-12-07 Thread Roebuck,Paul L
Do this first and try again. R Sys.setlocale(LC_COLLATE, C) On 12/7/11 3:41 AM, Hervé Pagès hpa...@fhcrc.org wrote: Hi, This looks OK: x - c(_1_, 1_9, 2_9) rank(x) [1] 1 2 3 But this does not: xa - paste(x, a, sep=) xa [1] _1_a 1_9a 2_9a rank(xa) [1] 2 1 3 Cheers, H.

Re: [Rd] Error message library()

2011-10-27 Thread Roebuck,Paul L
On 10/26/11 5:49 AM, Milan Bouchet-Valat nalimi...@club.fr wrote: Le mercredi 26 octobre 2011 à 09:46 +, ONKELINX, Thierry a écrit : When one tries to load a non-installed package you get the error: Error in library(xyz) : there is no package called 'xyz' I noticed on several occasions

[Rd] FW: [Q] Package NS Hook Lint NOTE (unanswered)

2011-09-19 Thread Roebuck,Paul L
Still have a question about the following NOTEs appearing on CRAN checks: .onLoad calls: require(methods) Package startup functions should not change the search path. See section ŒGood practice¹ in ?.onAttach. For years, I have had the following in my S4-requiring packages.

[Rd] [Q] Package NS Hook Lint NOTE

2011-09-14 Thread Roebuck,Paul L
Have a question about the following NOTEs appearing on CRAN checks: .onLoad calls: require(methods) Package startup functions should not change the search path. See section ŒGood practice¹ in ?.onAttach. For years, I have had the following in my S4-requiring packages.

[Rd] Data package questions

2011-06-09 Thread Roebuck,Paul L
In process of creating data package from an existing one. The current package has both raw data files and the associated RData objects created from them. Currently, the data subdirectory is 1.5Mb and the extdata is 5.4Mb. Never having created a data package before, how is this best done? Should

Re: [Rd] Wish there were a strict mode for R interpreter. What

2011-04-11 Thread Roebuck,Paul L
On 4/11/11 11:04 AM, Spencer Graves spencer.gra...@prodsyse.com wrote: On 4/11/2011 8:46 AM, Simon Urbanek wrote: On Apr 11, 2011, at 11:28 AM, Davor Cubranic wrote: On 2011-04-09, at 2:08 PM, Ted Harding wrote: I think the right thing to so is to introduce the students to the basics

Re: [Rd] Adding a description meta-tag to the R homepage

2011-04-01 Thread Roebuck,Paul L
On 4/1/11 1:38 PM, peter dalgaard pda...@gmail.com wrote: On Apr 1, 2011, at 08:49 , Tal Galili wrote: I believe that the R homepage will benefit from including the description meta tag in it's homepage. The reason is that google uses that tag to decide what to show when the R homepage

[Rd] Access R Help Content From R

2011-01-12 Thread Roebuck,Paul L
Have UI that simplifies running code from another (internal) package, allowing user to set values on fields I basically grabbed from results of calls to formals() for various functions. That works fine for the most part. But it was requested to investigate some type of popup help or something for

[Rd] FW: documentation for representation() typo

2010-11-30 Thread Roebuck,Paul L
This typo was never corrected. Original post from last month had incorrect file extension on URL, accidentally injured in a drive-by edit... https://svn.r-project.org/R/trunk/src/library/methods/man/representation.Rd 50c50 The value of \code{representation} is just the list of arguments,

[Rd] documentation for representation() typo

2010-10-27 Thread Roebuck,Paul L
https://svn.r-project.org/R/trunk/src/library/methods/man/representation.R 50c50 The value of \code{representation} is just the list of arguments --- The value pf \code{representation} is just the list of arguments, after these have been checked 51c51 after these have been checked for

[Rd] Syncing window plot update events during long-running evaluation

2010-04-19 Thread Roebuck,Paul L
I have two source packages, one normal and another a Tcl/Tk UI for controlling the former. However, as all UI arguments are passed to a single (potentially VERY long-running) function in the normal package, all output shows up after the completion of that function. I have a sort-of workaround for

Re: [Rd] Link to documentation in another package

2009-07-22 Thread Nicholas L Crookston
Try this: \code{\link[ggplot2]{ggsave}} Nicholas L. Crookston, Operations Research Analyst Rocky Mountain Research Station USDA Forest Service 1221 South Main, Moscow, ID 83843 Office: (208) 883-2317, FAX: (208) 883-2318 EMail: ncrooks...@fs.fed.us ONKELINX, Thierry thierry.onkel...@inbo.be

Re: [Rd] R thread safe

2009-03-18 Thread Nicholas L Crookston
there is an on-going discussion on the topic someone could point me to. Thanks, Nick. Nicholas L. Crookston, Operations Research Analyst Rocky Mountain Research Station USDA Forest Service 1221 South Main, Moscow, ID 83843 Office: (208) 883-2317, FAX: (208) 883-2318 EMail: ncrooks...@fs.fed.us

Re: [Rd] In Rd: \describe \itemize and \item

2009-01-30 Thread Nicholas L Crookston
Duncan Murdoch murd...@stats.uwo.ca wrote on 01/30/2009 12:04:56 PM: Okay, I think I see now. I installed your package version 1.0-8 in R-devel (to be 2.9.0), and the ?TallyLake man page looks fine to me in text mode, looks slightly funny in HTML (with the labels one line above the thing

[Rd] In Rd: \describe \itemize and \item

2009-01-29 Thread Nicholas L Crookston
them and fail the check on the development versions. I'm not sure I have fixed them correctly, but I'm trying! Suggestions? Comments? Thanks, Nick. PS: If this Email is not simple text, please let me know. Nicholas L. Crookston, Operations Research Analyst Rocky Mountain Research Station USDA

[Rd] R-intro.info.gz ellipsis node bug [SEC=UNCLASSIFIED] (PR#10658)

2008-01-30 Thread L . Hanson
Dear r-bugs, I think I may have uncovered a bug in the file R-intro.info.gz When running the info R-intro command on our Ubuntu 7.10 server, on which R 2.6.1 is installed, everything works fine until I try to access the node named The ellipsis argument (...), and then I observe the

[Rd] RPM support for package installation?

2007-02-06 Thread Rhiannon L Weaver
Hello, Tech question, I hope this has not been addressed before. I searched help archives and looked for online help but came up empty-handed. My question is: (short version) Is there a RPM-supported version of update.packages() for use with updating package libraries on managed multi-user