[R] plotting every ith data point?

2008-02-20 Thread Jessi Brown
Hello, fellow R enthusiasts. Ok, I've been racking my brain about this small issue, and between searching the help archives and reading through the plot-related documentation, I can't figure out how to achieve my desired endpoint without some ugly, brute force coding. What I would like to do is m

[R] plotting multiple lines in 3d

2008-03-10 Thread stephen sefick
I have been looking around for packages that will do this but I am not stumbling on the right one. I would like to make a 3d plot (hopefully an interactive graphic (rgl maybe)) that is simply four 2d graphs stacked next to each other traveling down river. site is the x-axis, bas is the y-axis, an

Re: [R] Plotting 2D Logistic regression

2008-10-17 Thread Ted Harding
On 17-Oct-08 17:59:55, Feldman, Ruben wrote: > Hi, > My data has time series for different variables and I want to predict > "ctw" with the value of each other variable at that point in the > series. > I have run a logistic regression: > logreg <- glm(ctw ~ age + OFICO + ... + CCombLTV, data=mydat

Re: [R] Plotting iregular time series

2008-10-29 Thread stephen sefick
why not look at the zoo package it can deal with time irregular time series. I have used it and I have been very happy. On Wed, Oct 29, 2008 at 5:52 PM, Levy,Ilan [Ontario] <[EMAIL PROTECTED]> wrote: > Hi, > > I have several time series that I need to plot on the same plot. > There are 3 problems

[R] plotting graph in different device

2008-11-09 Thread Swanton0822
Hi, i try to plot my graph into different device using x11(), but when i do this comes up: > x11(print(plot(A5e$ECAB,A5e$EXPEND,type='p',main='Per capita expenditure > against economic + ability index without outliners',xlab='ECAB',ylab='EXPEND',xlim=c(0,150),ylim=c(150,400), + col='red',col.axi

Re: [R] Plotting from a list

2008-11-13 Thread jim holtman
Yes you can automate it. The exact way would depend on how your data is structured and what you want the graphs to look like. It is hard to say without an example of the data and at least the command that your are using to create a single plot. On Thu, Nov 13, 2008 at 2:16 PM, <[EMAIL PROTECTED

Re: [R] Plotting from a list

2008-11-13 Thread Steve_Friedman
11/13/2008 04:04 cc PM EST"R help" <[EMAIL PROTECTED]> Subject

Re: [R] Plotting from a list

2008-11-13 Thread Marc Schwartz
on 11/13/2008 03:30 PM [EMAIL PROTECTED] wrote: > Hi again, > > Yes you are right I should have included an example of the file > > It looks like this after reading in the data and using tapply I arrive at > the following > >> Alt5rimc_mean > A B C D

Re: [R] Plotting from a list

2008-11-13 Thread Gabor Grothendieck
gt; > [EMAIL PROTECTED] > Office (305) 224 - 4282 > Fax (305) 224 - 4147 > > > > "jim holtman" > <[EMAIL PROTECTED] > om> To >

[R] plotting to Postscript and margins

2008-11-14 Thread Bastian A.
Hi, I am using R 2.8.0 on Kubuntu 8.04. My problem is that is can't get my postscript output to work the same way as on screen output. If I copy the device after plotting dev.print() font sizes don't match and text sticks out of the figure margins. When I use postscript() to create a new plotting

[R] plotting density for truncated distribution

2008-11-25 Thread Jeroen Ooms
I am using density() to plot a density curves. However, one of my variables is truncated at zero, but has most of its density around zero. I would like to know how to plot this with the density function. The problem is that if I do this the regular way density(), values near zero automatically ge

[R] Plotting with 2 y axes

2007-10-12 Thread Keith Cox
My data is the following: Time Resistance Temperature 5 2000 4 10 2200 8 15 2500 14 20 2900 20 25 3000 29 30 3100 38 35 3500 46 40 3800 47 45 3900 50 50 4000 51 I would like to create a scatter plot with Time on the x axis, Resistance on the y axis

Re: [R] plotting labels on barplot

2007-10-26 Thread Bernd Jagla
I am using the following construct and so far I am OK with it... b<-barplot(data, ylim=c(0, max(data)+max(data)/20)) text(b,data+max(data)/30, data) Thanks, for the comments. -B |-Original Message- |From: hadley wickham [mailto:[EMAIL PROTECTED] |Sent: Friday, October 26, 2007 11:47 AM

Re: [R] Plotting pdf of function

2009-03-04 Thread Dimitris Rizopoulos
have a look at ?curve(), e.g., curve((1 + x^2) / pi, -15, 15) I hope it helps. Best, Dimitris Beetle wrote: Hi Guys, I'm a numbie to R. I searched the forum for plotting pdf's of functions but couldn't find one that explained my question. I have been asked to plot the pdf fX(x) = 1/pi(1+x

Re: [R] Plotting pdf of function

2009-03-04 Thread Eik Vettorazzi
but this is not a probability density function, since lim(abs(x)-> infty)=infty. But there is just a pair of brackets missing in Beetles post. btw. homework? Dimitris Rizopoulos schrieb: have a look at ?curve(), e.g., curve((1 + x^2) / pi, -15, 15) I hope it helps. Best, Dimitris Beetle w

Re: [R] Plotting a time series

2009-04-01 Thread stephen sefick
don't use the type argument. You are telling plot to plot points. also please use dput() to make example code that can be cut and pasted out of the email right into R, so that your problem is reproducible. Stephen On Wed, Apr 1, 2009 at 2:52 PM, Thomas Adams wrote: > I have data that I read in

[R] Plotting C++ output in R

2009-04-16 Thread Andrew.Cox
Hi, Using R 2.8.0 on Windows, I have a mathematical model written in C++, the model writes to file (.txt) a set of numbers I want to plot in R. The model iterates over about 10,000 runs, each time overwriting the old with the new set of results to the output file. I want to be able to continu

[R] Plotting extra lines on scatterplot

2009-05-01 Thread Tony Laidig
Hello Everyone- I'm in the process of slowly learning R and am having a little bit of trouble plotting an extra line onto a scatterplot. I'm sure the answer is quite simple but I am stumped. The code I am using is: headways <- read.table("headways.csv", header=TRUE, sep=",", na.strings="", d

[R] plotting fit from ols( rcs() )

2009-05-02 Thread x
I have: f <- ols( y1 ~ (rcs(x1,3) + rcs(x2,3) + rcs(x1,3) %ia% rcs(x2,3) ) ) Then I do: plot(f) This plots y1 against x2 for a given value of x1. Is there a way to make it *also* plot y1 against x1 for a given value of x2? If not, I guess I can do coplot(y1 ~ x1 | x2). Thanks in advance, sp

Re: [R] Plotting pairs of bars

2009-05-05 Thread Greg Snow
Of Steve Murray > Sent: Tuesday, May 05, 2009 9:52 AM > To: r-help@r-project.org > Subject: [R] Plotting pairs of bars > > > Dear all, > > I have a matrix called combine86 which looks as follows: > > > combine86 > Sim Mean Obs Mean Sim Su

Re: [R] Plotting pairs of bars

2009-05-06 Thread Steve Murray
Thanks for the reply - the 'beside' argument certainly looks useful, although I'm still not getting the output I'd hoped for. By doing: barplot(combine86[,1:2], beside = TRUE, las = 1, xlab=rownames(combine86)) ...I get all the bars for the 'Sim Mean' column plotted on the left side of the gra

Re: [R] Plotting pairs of bars

2009-05-06 Thread Jim Lemon
Steve Murray wrote: Thanks for the reply - the 'beside' argument certainly looks useful, although I'm still not getting the output I'd hoped for. By doing: barplot(combine86[,1:2], beside = TRUE, las = 1, xlab=rownames(combine86)) ...I get all the bars for the 'Sim Mean' column plotted on the

Re: [R] Plotting pairs of bars

2009-05-06 Thread Steve Murray
Jim and all, Thanks for the suggestion, however, I get the following error: > barplot(t(combine86[,1:2], beside = TRUE, las = 1)) Error in t(combine86[, 1:2], beside = TRUE, las = 1) : unused argument(s) (beside = TRUE, las = 1) I've looked up ?t and cannot see any extra arguments that I sho

Re: [R] Plotting pairs of bars

2009-05-06 Thread Ben Bolker
Steve Murray-3 wrote: > > > Jim and all, > > Thanks for the suggestion, however, I get the following error: > >> barplot(t(combine86[,1:2], beside = TRUE, las = 1)) > Error in t(combine86[, 1:2], beside = TRUE, las = 1) : > unused argument(s) (beside = TRUE, las = 1) > > I've looked up ?

Re: [R] Plotting pairs of bars

2009-05-06 Thread Jim Lemon
Steve Murray wrote: Jim and all, Thanks for the suggestion, however, I get the following error: barplot(t(combine86[,1:2], beside = TRUE, las = 1)) Error in t(combine86[, 1:2], beside = TRUE, las = 1) : unused argument(s) (beside = TRUE, las = 1) I've looked up ?t and cannot see a

Re: [R] plotting multiple data sources

2009-05-14 Thread Greg Snow
re > Sent: Wednesday, May 13, 2009 5:59 PM > To: r-help@r-project.org > Subject: [R] plotting multiple data sources > > hi, > > Excuse me asking three questions in a row for a day, but I had > collected those questions > as I'm still experimenting with R. > This

Re: [R] Plotting question re. cuminc

2009-05-16 Thread Uwe Ligges
K F Pearce wrote: Hello everyone, (This is my second question posted today on the R list). and you have still not read the posting guide? It asks you to "provide commented, minimal, self-contained, reproducible code" which also means that you need to tell which packages you are using. I

Re: [R] Plotting two overlapping curves

2009-07-30 Thread Dimitris Rizopoulos
one way is the following: x <- seq(-2, 2, len = 11) y1 <- 2*x^2 + 3*x + 1 y2 <- - 2*x^2 - 3*x + 1 plot(x, y1, type = "l", col = "red", ylim = range(y1, y2)) lines(x, y2, col = "blue") I hope it helps. Best, Dimitris njhuang86 wrote: Hi. Sorry if this question might have already been asked.

[R] plotting a grid with grid() ?

2009-08-24 Thread John Kane
I am trying to come up with a way of shading-in a grid for a simple pattern So far I can draw a square where I want but I cannot seem to draw a complete grid. I am just drawing them along the diagonal!! Clearly I am missing something simple but what? Any suggestions gratefully accepted. Exam

Re: [R] plotting vector of symbols

2009-09-02 Thread stephen sefick
I did something very similar in ggplot2 about a year ago. Use the unique sampling location from the species count data (rownames) as a factor column, and then use that in a geom_color or geom_shape add on to qplot untested: library ggplot2 a <- metaMDS(foo, k=3) b <- rownames(foo) d <- data.fram

Re: [R] Plotting two qqnorm plots:

2009-09-08 Thread Greg Hirson
You can do this in lattice: library(lattice) df = data.frame(val = rnorm(100), group = rep(c('x', 'y'), each = 50)) qqmath(~val, groups = group, data = df) Hope that helps, Greg njhuang86 wrote: Hi all, Does anyone know how to plot overlapping qqnorm plots on the same window? Suppose I have

Re: [R] Plotting two qqnorm plots:

2009-09-08 Thread Rolf Turner
njhuang86 wrote: Hi all, Does anyone know how to plot overlapping qqnorm plots on the same window? Suppose I have data in the vector x and y: qqnorm(x) lines(qqnorm(y)) I though these two lines will do the job... However, lines doesn't seem to work. Anyways, thanks in advance! E.g.:

Re: [R] Plotting Prediction Surface with persp()

2008-07-02 Thread Duncan Murdoch
On 02/07/2008 8:47 PM, Rory Winston wrote: Hi all I have a question about correct usage of persp(). I have a simple neural net-based XOR example, as follows: library(nnet) xor.data <- data.frame(cbind(expand.grid(c(0,1),c(0,1)), c(0,1,1,0))) names(xor.data) <- c("x","y","o") xor.nn <- nnet(o ~

Re: [R] Plotting Prediction Surface with persp()

2008-07-03 Thread rory . winston
Great! Thanks for the advice. Cheers Rory --Original Message-- From: Duncan Murdoch To: Rory Winston Cc: r-help@r-project.org Sent: 3 Jul 2008 05:08 Subject: Re: [R] Plotting Prediction Surface with persp() On 02/07/2008 8:47 PM, Rory Winston wrote: > Hi all > > I have a quest

[R] Plotting Multiple lines on one plot

2008-07-22 Thread R_Learner
Hi, I'm trying to plot multiple lines on one plot. I have a data frame raw, and i want to plot raw$date on the x-axis and raw$theta, raw$vega, raw$delta, and a few others on the y-axis, with a legend. However, I'm not sure what the scale of those data sets are, and I don't know which one will ha

[R] Plotting multiple curves on a plot

2008-08-24 Thread ascentnet
Greetings! I was wondering how to plot multiple equation on the same plot with the data? So if I have three equations: 1.y= 2.31X + -2.2 2.y= 2.27X^2 + 5.63X + 0.52 3.y= -1.53X^3 + 1.92X^2 + -4.72X + 4.57 and a datafram or a 2D matrix. I would also like the equations in different colors,

[R] Plotting the complex fft in 3D?

2008-09-04 Thread Oliver Bandel
Hello, I'm new to R (using it since about two weeks), but absolutely a fan of it from the beginning on. :-) Best tool for working with data I found. :-) I tried using the fft() and other funcitons for analysing time series. What I would be glad to have, would be a convenient way to display the

Re: [R] plotting on the figure margin

2008-09-16 Thread Yihui Xie
?par see the 'xpd' argument; e.g. you may use legend(..., xpd = NA) or use the 'lattice' package Regards, Yihui -- Yihui Xie <[EMAIL PROTECTED]> Phone: +86-(0)10-82509086 Fax: +86-(0)10-82509086 Mobile: +86-15810805877 Homepage: http://www.yihui.name School of Statistics, Room 1037, Mingde Main

Re: [R] Plotting curves in lattice panels

2008-09-18 Thread Deepayan Sarkar
On 9/18/08, David Scott <[EMAIL PROTECTED]> wrote: > > I have a data set concerning ferritin levels in blood. There are three > relevant columns for this question, ferritin (continuous), score (ordered, > from 0 to 8) and gender. There is a good linear relationship between > log(ferritin) and scor

Re: [R] Plotting curves in lattice panels

2008-09-18 Thread David Scott
On Thu, 18 Sep 2008, Deepayan Sarkar wrote: On 9/18/08, David Scott <[EMAIL PROTECTED]> wrote: I have a data set concerning ferritin levels in blood. There are three relevant columns for this question, ferritin (continuous), score (ordered, from 0 to 8) and gender. There is a good linear rela

[R] plotting confidence intervals of regression line

2007-11-20 Thread Tim Holland
Hello, I am trying to generate a confidence interval (90 or 95%) of a regression line. This is primarily just for illustration on a scatter plot (i.e. I am trying to make this http://www.ast.cam.ac.uk/~rgm/scratch/statsbook/graphics/anima4.gif). I have been trying to use the predict.lm function,

[R] Plotting + saving to file on Linux

2007-11-21 Thread Maura E Monville
Thanks to all those of you who answered my question about how to save a plot to a file. But now I have another problem. That is I wish to see / examine the plot on the screen in advance of saving it to a file. If I launch X11() or pdf() or Poscript() the plot does not appear on my screen .. So I ha

[R] Plotting error bars in xy-direction

2007-12-05 Thread Hans W. Borchers
Dear R-help, I am looking for a function that will plot error bars in x- or y-direction (or both), the same as the Gnuplot function 'plot' can achieve with: plot "file.dat" with xyerrorbars,... Rsite-searching led me to the functions 'errbar' and 'plotCI' in the Hmisc, gregmisc, and plotri

[R] Plotting multiple jpegs on a plot?

2007-12-21 Thread jchernev
Hello, I have a set of data which I currently represent graphically on a plot. To do that, I use the embedded functions from the graphics package (symbols, rect, etc.) However, I would like to use static jpeg images to represent the data if possible. Here's my progress so far: 1. Used the rimage

Re: [R] Plotting labeled impulses: label collision

2008-01-05 Thread Jim Lemon
Johannes Graumann wrote: > Dear all, > > As you can see from the attachment I'm using R to automatically annotate > peptide fragmentation mass spectra, which are represented by impulse plots. > I'd like to poll you on approaches of how to deal as generally as possible > with the two biggest annota

Re: [R] Plotting labeled impulses: label collision

2008-01-09 Thread Johannes Graumann
Jim, I finally got back to this implementation of mine and dude, this function is amazing! Thank you so much! Joh On Saturday 05 January 2008 11:42:30 Jim Lemon wrote: > Johannes Graumann wrote: > > Dear all, > > > > As you can see from the attachment I'm using R to automatically annotate > > p

[R] Plotting a smooth curve through points

2008-01-10 Thread Anderson, Walter
I have a set of Monte Carlo simulation results for a Quick Response Freight Model that I am currently preparing summary graphs. I want to show three things on the graphs; the model forecast, an approximate exponential best fit line, and a smooth line through mean+sd and mean-sd data points. As yo

Re: [R] plotting other axes for PCA

2008-01-18 Thread Mark Difford
Hi Silvia, >> What I need is exactly what I get using biplot (pca.object) but for other >> axes. You need to look at ?biplot.prcomp (argument: choices=) ## Try biplot(prcomp(USArrests), choices=c(1,2)) ## plots ax1 and ax2 biplot(prcomp(USArrests), choices=c(1,3)) ## plots ax1 and ax3

Re: [R] plotting other axes for PCA

2008-01-18 Thread Prof Brian Ripley
On Fri, 18 Jan 2008, Silvia Lomascolo wrote: > > Hi R-community, > I am doing a PCA and I need plots for different combinations of axes (e.g., > PC1 vs PC3, and PC2 vs PC3) with the arrows indicating the loadings of each > variables. What I need is exactly what I get using biplot (pca.object) but

[R] Plotting 3 vectors on one graph.

2008-02-02 Thread cvandy
I'm an R newbie and am trying to plot 3 vectors, say a,b,c. I have downloaded 3 R manuals and searched your forum. There are plenty of X vs Y examples, but cannot find how to plot 3, or more vectors one one graph. I'm sure I overlooked something. Thanks for any help. CHV -- View this message i

[R] Plotting activity by time and dates

2009-01-13 Thread Neotropical bat risk assessments
Hi all, As I understand the zoo package will aggregate dates and times, but unclear how to tackle this problem. I need to accomplish the following: 1. Generate a scatter plot of bat activity with dates on the X-axis and time on the Y-axis. include sunset and sunrise curves as an added part

Re: [R] plotting points with two colors

2009-01-20 Thread David Winsemius
?plot.default plot(x <- rnorm(47), type = "p", main = "plot(x, type = \"p\")", col = c("dark red","blue")) If you plan to have a system for the coloring, you need to get the values sequence-aligned with the colors. This just colors every other point "blue". -- David Winsemius On Jan 20,

Re: [R] plotting points with two colors

2009-01-20 Thread Greg Snow
t; -Original Message- > From: r-help-boun...@r-project.org [mailto:r-help-boun...@r- > project.org] On Behalf Of Georg Ehret > Sent: Tuesday, January 20, 2009 10:23 AM > To: r-help > Subject: [R] plotting points with two colors > > Dear Miss R, > I am trying to plot a

[R] plotting curve in xYplot -- using panel.curve

2009-01-23 Thread John Poulsen
Hello, I am trying to plot a curve over points plotted with se's in xYplot (see example below). I can get Figure 1 below to plot the data with error. However, I keep getting a the error message "Error using packet 1 object "y" not found" Can anyone see what I am doing wrong? Thanks! John

Re: [R] Plotting graph for Missing values

2009-01-25 Thread jim holtman
What does you data look like? You could use 'split' and then examine the data in each range to count the number missing. Would have to have some actual data to suggest a solution. On Sun, Jan 25, 2009 at 8:30 PM, Shreyasee wrote: > Hi, > > I have imported one dataset in R. > I want to calculate

Re: [R] Plotting graph for Missing values

2009-01-25 Thread Shreyasee
Hi Jim, The dataset has 4 variables (dos, patientinformation1, patientinformation2, patientinformation3). In dos variable ther are months (May 2006 to March 2007) when the surgeries were formed. I need to calculate the percentage of missing values for each variable (patientinformation1, patientinf

Re: [R] Plotting graph for Missing values

2009-01-25 Thread jim holtman
Here is an example of how you might approach it: > dos <- seq(as.Date('2006-05-01'), as.Date('2007-03-31'), by='1 day') > pat1 <- rbinom(length(dos), 1, .5) # generate some data > # partition by month and then list out the number of zero values (missing) > tapply(pat1, format(dos, "%Y%m"), functi

Re: [R] Plotting graph for Missing values

2009-01-25 Thread Shreyasee
Hi Jim, I need to calculate the missing values in variable "patientinformation1" for the period of May 2006 to March 2007 and then plot the graph of the percentage of the missing values over these months. This has to be done for each variable. The code which you have provided, calculates the missi

Re: [R] Plotting graph for Missing values

2009-01-25 Thread jim holtman
YOu can save the output of the tapply and then replicate it for each of the variables. The data can be used to plot the graphs. On Sun, Jan 25, 2009 at 9:38 PM, Shreyasee wrote: > Hi Jim, > > I need to calculate the missing values in variable "patientinformation1" for > the period of May 2006 to

Re: [R] Plotting graph for Missing values

2009-01-25 Thread Shreyasee
Hi Jim, I tried the code which u provided. In place of "dos" in command "pat1 <- rbinom(length(dos), 1, .5) # generate some data" I added "patientinformation1" variable and then I gave the command for "tapply" but its giving me the following error: *Error in tapply(pat1, format(dos, "%Y%m"), fun

Re: [R] Plotting graph for Missing values

2009-01-25 Thread jim holtman
do: str(dos) str(patientinformation1) They must be the same length for the command to work: must be a one to one match of the data. On Sun, Jan 25, 2009 at 10:23 PM, Shreyasee wrote: > Hi Jim, > > I tried the code which u provided. > In place of "dos" in command "pat1 <- rbinom(length(dos), 1,

Re: [R] Plotting graph for Missing values

2009-01-25 Thread Shreyasee
Hi Jim, I run the following code *ds <- read.csv(file="D:/Shreyasee laptop data/ASC Dataset/Subset of the ASC Dataset.csv", header=TRUE) > attach(ds) > str(dos)* I am getting the following message: *Factor w/ 12 levels "-00-00","6-Aug",..: 6 6 6 6 6 6 6 6 6 6 ...* Thanks, Shreyasee On

Re: [R] Plotting graph for Missing values

2009-01-26 Thread jim holtman
>From your original posting: > I tried the code which u provided. > In place of "dos" in command "pat1 <- rbinom(length(dos), 1, .5) # generate > some data" > I added "patientinformation1" variable and then I gave the command for > "tapply" but its giving me the following error: > > Error in tapp

Re: [R] Plotting graph for Missing values

2009-01-26 Thread bartjoosen
> I added "patientinformation1" variable and then I gave the command for > "tapply" but its giving me the following error: > > Error in tapply(pat1, format(dos, "%Y%m"), function(x) sum(x == 0)) : > arguments must have same length seems like you added patientinformation1, but still use pat1 i

Re: [R] Plotting graph for Missing values

2009-01-26 Thread Petr PIKAL
Hi Jim r-help-boun...@r-project.org napsal dne 26.01.2009 15:44:32: > >From your original posting: > > > I tried the code which u provided. > > In place of "dos" in command "pat1 <- rbinom(length(dos), 1, .5) # generate > > some data" > > I added "patientinformation1" variable and then I gave

Re: [R] Plotting with exact axis limits

2008-04-14 Thread Duncan Murdoch
On 14/04/2008 6:56 PM, Enrico Rossi wrote: > Hello, > > If I make a plot, say something simple like > > plot( runif(100) ) > > then the origin (0,0) is not at the bottom-left corner of the box > surrounding the plot. The axis limits are "padded" slightly. This is > ordinarily a good feature, bec

Re: [R] Plotting with exact axis limits

2008-04-14 Thread Daniel Malter
--- -Ursprüngliche Nachricht- Von: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] Im Auftrag von Enrico Rossi Gesendet: Monday, April 14, 2008 6:57 PM An: r-help@r-project.org Betreff: [R] Plotting with exact axis limits Hello, If I make a plot, say something simple like plot( runif(10

Re: [R] Plotting with exact axis limits

2008-04-14 Thread Enrico Rossi
ithin the bounding box. Style "d" (direct) > specifies that the current axis should be used on subsequent plots. (Only > "r" and "i" styles are currently implemented) > > Cheers, > Daniel > > > - > cuncta strict

Re: [R] Plotting separate populations in scatterplot3d

2008-05-06 Thread Yasir Kaheil
#Install library rgl #here is the function which you need to run first: rgl.plot3d<-function(z, x, y, cols="red",axes=T,new=T) {xr<-range(x) x01<-(x-xr[1])/(xr[2]-xr[1]) yr<-range(y) y01<-(y-yr[1])/(yr[2]-yr[1]) zr<-range(z) z01<-(z-zr[1])/(zr[2]-zr[1]) if(new) rgl.clear() if(axes)

[R] Plotting a function with a histogram

2008-05-09 Thread Amit Soni
Hi, I have a histogram of an array of numbers. hist(v,10) How can I plot a function, say a semi circle, curve(sqrt(2.25-x*x), -1.5,1.5) in the same graph? Thank you [[alternative HTML version deleted]] __ R-help@r-project.org mailing list htt

Re: [R] Plotting Frequency Distribution in R

2008-05-13 Thread jim holtman
Does something like this do it for you: x <- read.table(textConnection(" V1 V2 1 1 160.54% 2 1 201.59% 3 1 18.45% 4 1 179.03% 5 1 274.37% 6 1 0.00% 7 1 24.52% 8 1 39.17% 9 3 43.72% 10 1 53.06% 11 1 64.97% 12 1 79.84% 13 1 98.08% 14 1 115.32% 15 1 127.96% 16

Re: [R] Plotting Frequency Distribution in R

2008-05-13 Thread tony.sun
x <- read.table(textConnection(" V1 V2 1 1 160.54% 2 1 201.59% 3 1 18.45% 4 1 179.03% 5 1 274.37% 6 1 0.00% 7 1 24.52% 8 1 39.17% 9 3 43.72% 10 1 53.06% 11 1 64.97% 12 1 79.84% 13 1 98.08% 14 1 115.32% 15 1 127.96% 16 1 155.38% 17 1 157.25% 18 1 193.17%

Re: [R] plotting different level of classficifaction

2008-05-14 Thread Jim Lemon
jiho.han wrote: hello, useRs~ suppose i have a matrix as follows: itemcategory sub-category A 1 11 B 1 12 C 1 12 D 2 21 E 2 22 i like to draw

Re: [R] plotting different level of classficifaction

2008-05-14 Thread Jim Lemon
Oops, you will need: library(prettyR) to run the barhier function. Jim __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commente

Re: [R] Plotting Frequency Distribution in R

2008-05-14 Thread Sachin J
"red") Thanks, Sachin - Original Message From: Jorge Ivan Velez <[EMAIL PROTECTED]> To: Sachin J <[EMAIL PROTECTED]> Sent: Tuesday, May 13, 2008 11:33:56 AM Subject: Re: [R] Plotting Frequency Distribution in R Hi Sachin, Is this what you want? df<-"V1

Re: [R] Advise in R- plotting graphs

2008-05-23 Thread jim holtman
try this: x <- matrix(runif(15, 100, 300), ncol=3) plot(x[,1], x[,2], type='l') points(x[5,1], x[5,2], pch=17, cex=3, col='red') # plot point #5 On Fri, May 23, 2008 at 8:50 AM, Jason Lee <[EMAIL PROTECTED]> wrote: > Hi > > I have a data table matrix,"data" which looks like below:- > V1

[R] Fwd: Advise in R- plotting graphs

2008-05-23 Thread Jason Lee
Hi I tried and it is not what im looking .. I basically issue plot(data$"V1",data$"V2") as the matrix have the two headers..But essentially what I would like is relabel or somehow differentiate row 5 from the rest of the points on the graph. In other words, I wanted to see all the points but at

Re: [R] Advise in R- plotting graphs

2008-05-24 Thread Ista Zahn
> > > From: "Jason Lee" <[EMAIL PROTECTED]> > Date: May 23, 2008 10:06:18 AM EDT > To: r-help@r-project.org > Subject: [R] Fwd: Advise in R- plotting graphs > > > Hi > > I tried and it is not what im looking .. > > I basically issue plot(da

Re: [R] Advise in R- plotting graphs

2008-05-24 Thread S Ellison
e plot(V1,V2, col=ifelse( (1:length(V1)) == 5, "red","black") ) or plot(V1,V2, pch=ifelse( (1:length(V1)) == 5, 1,2) ) -- View this message in context: http://www.nabble.com/Advise-in-R--plotting-graphs-tp17424911p17452851.html Sent from the R help mailing list archive at Nab

[R] Plotting multiple continuous lines with symbols

2008-06-10 Thread Tariq Perwez
Hi, I am trying to plot multiple lines on one plot such that all lines are of the same color (black) and continuous. I need to distinguish these multiple plots from each other by using different symbols (I am using pch=). However, all my lines are broken on both sides of the symbols. This unfortuna

Re: [R] plotting every ith data point?

2008-02-20 Thread Gabor Grothendieck
Try this: ix <- seq(1, nrow(example.df), 5) with(example.df[ix,], { plot(DSR1 ~ StartDate, type = "b", ylim = c(0.3, 0.9)) points(DSR2 ~ StartDate, type = "b", pch = 3) }) On Wed, Feb 20, 2008 at 6:57 PM, Jessi Brown <[EMAIL PROTECTED]> wrote: > Hello, fellow R enthusiasts. > > Ok, I've be

Re: [R] plotting every ith data point?

2008-02-20 Thread Gabor Grothendieck
Try this: library(lattice) xyplot(DSR1 + DSR2 ~ StartDate, example.df, type = "b", pch = c(1, 3), subset = seq(1, nrow(example.df), 5)) On Wed, Feb 20, 2008 at 8:57 PM, Jessi Brown <[EMAIL PROTECTED]> wrote: > Thanks for the ideas so far, Gabor and Phil. > > I was hoping to find a solution that

Re: [R] plotting every ith data point?

2008-02-20 Thread Jessi Brown
Thanks for the ideas so far, Gabor and Phil. I was hoping to find a solution that didn't depend on building another data frame, but if that's the easiest way, I can certainly do it through that route. At least your solutions involve fewer lines of code than I had devised for extracting the desired

Re: [R] plotting every ith data point?

2008-02-20 Thread K. Elo
Hi, this might also work for You: > points(example.df$StartDate[ (row(example.df)%%5)==0 ], example.df$DSR2[ (row(example.df)%%5)==0 ], type="p", pch=3) > points(example.df$StartDate[ (row(example.df)%%5)==0 ], example.df$DSR2[ (row(example.df)%%5)==0 ], type="p", pch=3) Kind regads, Kimmo Je

Re: [R] plotting every ith data point?

2008-02-20 Thread K. Elo
Hi, sorry, the correct commands should look like this: > plot(example.df$StartDate[ (row(example.df)%%5)==0 ], example.df$DSR1[ (row(example.df)%%5)==0 ], type="p", ylim=c(0.3,0.9)) > points(example.df$StartDate[ (row(example.df)%%5)==0 ], example.df$DSR2[ (row(example.df)%%5)==0 ], type="p", pc

Re: [R] plotting every ith data point?

2008-02-21 Thread jebyrnes
Here's a similar variant on what has been proposed, but is simpler. It relies on the fact that plot() doesn't need a ~. a<-1:100 b<-seq(1,length(a),5) plot(1:20, a[1:b]) Alternately, if you were using a data frame, as long as you knew the column names, you could do something like plot(my.dat

Re: [R] plotting every ith data point?

2008-02-22 Thread Greg Snow
ssi Brown > Sent: Wednesday, February 20, 2008 6:57 PM > To: Gabor Grothendieck > Cc: r-help@r-project.org > Subject: Re: [R] plotting every ith data point? > > Thanks for the ideas so far, Gabor and Phil. > > I was hoping to find a solution that didn't depend on

[R] plotting big zoo object memory problem

2008-03-05 Thread stephen sefick
the comma seperated file is 37Mb, and I get the below message: it is zoo object read in this way: # chron > library(chron) > fmt.chron <- function(x) { +chron(sub(" .*", "", x), gsub(".* (.*)", "\\1:00", x)) + } > z1 <- read.zoo("all.csv", sep = ",", header = TRUE, FUN = fmt.chron) and then t

[R] Plotting matrix rows with lattice graphics?

2008-03-24 Thread Ron Bonner
Sorry if this is an FAQ, but I haven't found the answer (yet)... I'm trying to plot each row of a simple numeric matrix in a separate panel using the layout features of lattice, but can't make it work - help would be appreciated! Example: > m <- matrix(seq(1:20), nrow=4) > m [,1] [,

Re: [R] plotting graph in different device

2008-11-10 Thread ONKELINX, Thierry
ens Swanton0822 Verzonden: maandag 10 november 2008 2:45 Aan: r-help@r-project.org Onderwerp: [R] plotting graph in different device Hi, i try to plot my graph into different device using x11(), but when i do this comes up: > x11(print(plot(A5e$ECAB,A5e$EXPEND,type='p',main='Per

Re: [R] plotting density for truncated distribution

2008-11-25 Thread roger koenker
Default kernel density estimation is poorly suited for this sort of situation. A better alternative is logspline -- see the eponymous package -- you can specify lower limits for the distribution as an option. url:www.econ.uiuc.edu/~rogerRoger Koenker email[EMAIL PROTECTED

Re: [R] plotting density for truncated distribution

2008-11-26 Thread Chris Andrews
Another option mydata <- rnorm(10) mydata <- mydata[mydata>0] plot(density(c(mydata, -mydata), from=0)) If you want the area under the curve to be one, you'll need to double the density estimate dx <- density(c(mydata, -mydata), from=0) dx$y <- dx$y * 2 plot(dx) Chris Jeroen Ooms wrote:

Re: [R] plotting density for truncated distribution

2008-11-26 Thread Jeroen Ooms
thank you, both solutions are really helpful! -- View this message in context: http://www.nabble.com/plotting-density-for-truncated-distribution-tp20684995p20703469.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org

[R] Plotting a kriging on a map

2008-12-04 Thread Rodrigo Aluizio
Hi list, Well, this time I’ve a doubt with mapping generation. I was already able to read and plot shapefiles, plot point on this map. All this without any problems, but now I want to do something that I think, only Golden Software Surfer is capable of. I would like to plot a kriging result on t

Re: [R] Plotting with 2 y axes

2007-10-12 Thread jim holtman
basically something along these lines: plot(Time, Resistance, bty='c') par(new=TRUE) plot(Time, Temperature, axes=FALSE, ylab='', xlab='') axis(4) On 10/12/07, Keith Cox <[EMAIL PROTECTED]> wrote: > My data is the following: > > > > > Time > > Resistance > > Temperature > > > 5 > > 2000 > > 4 > >

[R] plotting coxph results using survfit() function

2007-11-13 Thread Shoaaib Mehmood
i want to make survival plots for a coxph object using survfit function. mod.phm is an object of coxph class which calculated results using columns X and Y from the DataFrame. Both X and Y are categorical. I want survival plots which shows a single line for each of the categories of X i.e. '4' and

Re: [R] Plotting C++ output in R

2009-04-16 Thread Warren Young
andrew@lshtm.ac.uk wrote: I want to be able to continuously plot the output from the model in R each time a new run generates data. From the C++ program, run the R script that plots the data. Something like this: system("Rscript myplotter.R"); That assumes Rscript is in the PA

Re: [R] Plotting extra lines on scatterplot

2009-05-01 Thread John Fox
) to the plot." I hope this helps, John > -Original Message- > From: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] On > Behalf Of Tony Laidig > Sent: May-01-09 4:14 PM > To: r-help@r-project.org > Subject: [R] Plotting extra lines on scatter

Re: [R] plotting fit from ols( rcs() )

2009-05-02 Thread David Winsemius
On May 2, 2009, at 4:09 PM, x wrote: I have: f <- ols( y1 ~ (rcs(x1,3) + rcs(x2,3) + rcs(x1,3) %ia% rcs(x2,3) ) ) Then I do: plot(f) This plots y1 against x2 for a given value of x1. Is there a way to make it *also* plot y1 against x1 for a given value of x2? Are you using the Design

[R] Plotting colors on a world map

2009-05-11 Thread dxc13
Hi useR's I have created a simple map of the world using the following code: m <- map(xlim=c(-180,180), ylim=c(-90,90)) map.axes() I then create a grid of dimension 36x72 using the code: map.grid(m, nx=72, ny=36, labels=FALSE, col="black") This gives 2592 grid cells. In a separate data set of

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