Re: [R-sig-phylo] PGLS vs lm

2013-07-11 Thread Emmanuel Paradis
Hi Tom, In an OLS regression, the residuals from both regressions (varA ~ varB and varB ~ varA) are different but their distributions are (more or less) symmetric. So, because the residuals are independent (ie, their covariance is null), the residual standard error will be the same (or very

[R-sig-phylo] AICc model averaging for PGLS models with optimised lambda

2013-07-11 Thread Malpas, Lucy
Hi All, I am running a pgls regression analysis in the caper package in R. My dataset has a continuous response variable and five explanatory variables (three continuous, two discrete and with multiple categories). Each datapoint in the response variables corresponds to a single species of

Re: [R-sig-phylo] PGLS vs lm

2013-07-11 Thread Theodore Garland Jr
I think the issue is largely one of conceptualizing the problem. People often view body size as an independent variable when analyzing brain size, but obviously this is a serious oversimplificaiton -- usually done for statistical convenience -- that does not reflect the biology (yes, I have also