ompact, and easily parsed file formats
> for the storage of shotgun proteomic spectra and identifications. *Rapid
> Communications in Mass Spectrometry*, *18*(18), pp.2162-2168.
>
>
>
>
>
> On Tuesday, June 9, 2020 at 1:42:28 AM UTC-7, Javan Okendo wrote:
>
> Thanks all f
>> support for the SEQUEST pipeline option should probably be removed from the
>> UI unless anyone can confirm that it actually still works.
>>
>> On Monday, June 8, 2020 at 1:56:45 PM UTC-7, JAVAN OKENDO wrote:
>>>
>>>
>>> I am getting
Hi,
Can you show the error message?
Thanks,
Javan
On Wed, 27 May 2020, 19:36 Nimai Charan Mahanandia, <
nimaibioinf...@gmail.com> wrote:
> I am trying to convert the Bruker .baf file to mzML format. However, it is
> not converting and showing error.
>
> Can anybody help me on this problem?
>
>
hermo and does
> not come with the TPP. I'm not even sure if current versions of SEQUEST
> through Thermo are compatible with the TPP pipeline. Have you acquired
> SEQUEST from Thermo?
>
> On Mon, Apr 13, 2020 at 10:16 AM JAVAN OKENDO
> wrote:
>
>> Dear all,
>>
Hi Jimmy,
The second option works and it is the best thing to do.
Thanks,
Javan Okendo
On Monday, April 13, 2020 at 7:27:44 PM UTC+2, JAVAN OKENDO wrote:
>
> I get the following error even though my mzML raw files are in the "Data"
> dir. Why is the program complaining ab
t; Jimmy
>
> On Mon, Apr 13, 2020 at 10:27 AM JAVAN OKENDO
> wrote:
>
>> I get the following error even though my mzML raw files are in the "Data"
>> dir. Why is the program complaining about the .pepXML not found and yet am
>> doing the comet
ated using
comet 2019.01
On Monday, April 13, 2020 at 7:27:44 PM UTC+2, JAVAN OKENDO wrote:
>
> I get the following error even though my mzML raw files are in the "Data"
> dir. Why is the program complaining about the .pepXML not found and yet am
> doing the comet sear
I get the following error even though my mzML raw files are in the "Data"
dir. Why is the program complaining about the .pepXML not found and yet am
doing the comet search? I am stuck and I disparately need your assistance
- c:/Data/170909_CH_C1_T006_FT.pep.xml (*file not found:* not created
Dear all,
It is my first time to run the SEQUEST and I am wodering how to generate
this on TPP? Can someone share a sample parameter file?
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