[Tutor] R: Re: Tutor Digest, Vol 131, Issue 59 Order loop from methos on class (jarod...@libero.it)

Thanks so much!! Now I understood it is a stupid thing! So, could you elpme to decompose the problem? I initiazlizate the class with the file to use so all the function have all the parameters that I need. At the moment I have in mind only to do this: ena = Rna() job1 = ena.trim() job2 =

Re: [Tutor] Tutor Digest, Vol 131, Issue 59 Order loop from methos on class (jarod...@libero.it)

2015-01-26 14:54 GMT+01:00 jarod...@libero.it jarod...@libero.it: Thanks so much!! Now I understood it is a stupid thing! So, could you elpme to decompose the problem? I initiazlizate the class with the file to use so all the function have all the parameters that I need. At the moment I have

[Tutor] Inquiry regarding GSoC 2015

Hello, I want to take part in GSoC 2015 under PSF. I am a beginner in python and have started contributing and i am also registerd at github. Please suggest as from which projects i should start for contributing as i am beginner in python. thanks. ___

Re: [Tutor] R: Re: Tutor Digest, Vol 131, Issue 59 Order loop from methos on class (jarod...@libero.it)

On 26/01/15 13:54, jarod...@libero.it wrote: I initiazlizate the class with the file to use so all the function have all the parameters that I need. At the moment I have in mind only to do this: ena = Rna() job1 = ena.trim() job2 = ena.align() It is no so elegant.. You originally posted a

[Tutor] R: Tutor Digest, Vol 131, Issue 60 order loop from methos on class

dear all, thanks so much!! I explain better my problem :http://pastebin.com/iiPZMi2U this is my workflow. Take my data from readset an create a command list ena = Rnaseq() The order of the self.step are the order I wan to to execute my analisys. So this is the order: In [160]: ena.show() 1-

Re: [Tutor] Tutor Digest, Vol 131, Issue 59 Order loop from methos on class (jarod...@libero.it)

On 26/01/2015 14:41, Dino Bektešević wrote: 2015-01-26 14:54 GMT+01:00 jarod...@libero.it jarod...@libero.it: Thanks so much!! Now I understood it is a stupid thing! So, could you elpme to decompose the problem? I initiazlizate the class with the file to use so all the function have all the

Re: [Tutor] SQLAlchemy

Greetings Mike, : I'm working my way through Thinkful with python and I'm trying to : get a setup working. Part of this setup is using SQLAlchemy. : While I understand this is a python tutor list, would it be OK to : ask questions like 'how do I change my SQLAlchemy URL to include : a

[Tutor] SQLAlchemy

Hey folks, I'm working my way through Thinkful with python and I'm trying to get a setup working. Part of this setup is using SQLAlchemy. While I understand this is a python tutor list, would it be OK to ask questions like 'how do I change my SQLAlchemy URL to include a user name' here? -- ~MEN

Re: [Tutor] Inquiry regarding GSoC 2015

We (the Tutor list) are not a mentor for GSoC. You'll want to talk to the right organization for this, because I don't think any of us here have any direct experience with that program. GSoC has a Frequently Asked Questions that you should read:

Re: [Tutor] R: Tutor Digest, Vol 131, Issue 60 order loop from methos on class

Hello, The order of the self.step are the order I wan to to execute my analisys. So this is the order: In [160]: ena.show() 1- trimmomatic 2- merge_trimmomatic_stats 3- star 4- picard_sort_sam 5- rnaseqc 6- wiggle 7- cufflinks 8- cuffquant 9- gq_seq_utils_exploratory_analysis_rnaseq

[Tutor] Overlay Quiver Plot on Contours

Hello, I have the following script: import netCDF4 import numpy as np import matplotlib.pyplot as plt import pylab ncfile = netCDF4.Dataset('30JUNE2012_0300UTC.cdf', 'r') dbZ = ncfile.variables['MAXDBZF'] data = dbZ[0,0] data.shape x = np.array([0,10,11]) y = np.array([0,15,16]) X,Y =

Re: [Tutor] Overlay Quiver Plot on Contours

and I am getting this error: TypeError: You must first set_array for mappable Can anyone provide guidance on how you overlay quiver plots on top of contours? This list is for newcomers to Python and its standard library. This looks like a fairly specific SciPy/Numpy, and especially

Re: [Tutor] Overlay Quiver Plot on Contours

On 26/01/15 23:24, Felisha Lawrence wrote: Hello, I have the following script: import netCDF4 import numpy as np import matplotlib.pyplot as plt import pylab ... and I am getting this error: TypeError: You must first set_array for mappable Can anyone provide guidance on how you overlay

[Tutor] functions first?

Please correct me if I am wrong, but I've assumed that it is proper to define all functions before embarking on the main body of a program. I find myself breaking this rule because I want to set the default values of some named function parameters based on a configuration file which I have to

Re: [Tutor] functions first?

Alex Kleider aklei...@sonic.net writes: Please correct me if I am wrong, but I've assumed that it is proper to define all functions before embarking on the main body of a program. I would say rather that as much code as possible should be in small well-defined functions, with the “main body” a

[Tutor] order loop from methos on class

Dear All, What is the best way to loop on methos on a class? class Rna(): def trim(): ... def align(): ... ena = Rna() ena.trim() ena.aling() Thanks for any suggestion!!! ___ Tutor maillist - Tutor@python.org To

Re: [Tutor] order loop from methos on class

On Mon, Jan 26, 2015 at 11:48:52AM +0100, jarod...@libero.it wrote: Dear All, What is the best way to loop on methos on a class? I do not understand the question. Can you explain in more detail? class Rna(): def trim(): ... def align(): ... Both methods need

Re: [Tutor] Tutor Digest, Vol 131, Issue 59 Order loop from methos on class (jarod...@libero.it)

Message: 1 Date: Mon, 26 Jan 2015 11:48:52 +0100 (CET) From: jarod...@libero.it jarod...@libero.it To: tutor@python.org Subject: [Tutor] order loop from methos on class Message-ID: 2044122047.125321422269332108.JavaMail.defaultUser@defaultHost Content-Type: text/plain;