[gridengine users] queue list on queries is not updated on ARCo

2011-11-18 Thread mahbube rustaee
hi , I installed GE6.2u5 version. steps for install-enabling ARCO are: 1- install postgresql and create users and databases. 2- install dbwriter 2- install SWC 3- install reporting 4- configure sge for accounting and reporting: # qconf -mconf reporting_params accounting=true reporting

[gridengine users] get free/used slots per host

2011-11-18 Thread mahbube rustaee
hi, Is there any command in GE that get free/used slots per host? Thx ___ users mailing list users@gridengine.org https://gridengine.org/mailman/listinfo/users

[gridengine users] define h_vmem via RQS

2011-11-18 Thread mahbube rustaee
Hi, I define slots of all hosts with: { name limit-slots-of-hosts description limits slots of clusters's hosts enabled TRUE limithosts {@gpu} to slots=48 limithosts {@xeon} to slots=24 limithosts {@amd} to slots=48 } And it works correctly.

[gridengine users] lock number of cores

2011-11-18 Thread mahbube rustaee
Hi, Some users wants to get cores less than all core of a host and lock other slots. How can config GE to do that? e.g. a user use 20 slots of a host with 48 core and lock other slots. In that case, 1) Is accounting for all cores (used and locked)? 2) If not, how can I account all slots for a use

[gridengine users] define PE on special hosts

2011-11-18 Thread mahbube rustaee
Hi, I defined a queue on @node-grp (a group of nodes). I defined mpi2 parallel environment as: start_proc_args/opt/gridengine/mpi/startmpi. sh $pe_hostfile stop_proc_args /opt/gridengine/mpi/stopmpi.sh allocation_rule2 control_slaves FALSE job_is_first_task TRUE urgency_slots

Re: [gridengine users] unable to find epilog

2011-11-18 Thread Reuti
Am 18.11.2011 um 18:17 schrieb Gerard Henry: > hello all, > i added an epilog script: > $ qconf -sq solvqual > ... > epilog/net/master/home/me/solvqual/scripts.sh scriptS > ... > > and the file seems ok: > $ ls -l /net/master/home/me/solvqual/script.sh script > -rwxr-xr-x 1 m

Re: [gridengine users] Courtesy binaries including Berkeley?

2011-11-18 Thread Smith, David [EESUS]
Thanks, Dave. Unfortunately, I'm not working from RPM. I don't recall there being an RPM when I first installed SGE (else I surely would have used it). I don't know how my directory structure matches up with the RPM structure, so I'm reluctant to try to install over the top of my current insta

[gridengine users] unable to find epilog

2011-11-18 Thread Gerard Henry
hello all, i added an epilog script: $ qconf -sq solvqual ... epilog/net/master/home/me/solvqual/scripts.sh ... and the file seems ok: $ ls -l /net/master/home/me/solvqual/script.sh -rwxr-xr-x 1 me 501 282 18 nov 17:56 /net/master/home/me/solvqual/script.sh but SGE doesn't f

Re: [gridengine users] Courtesy binaries including Berkeley?

2011-11-18 Thread Dave Love
"Smith, David [EESUS]" writes: > Dave, > > Thanks very much for the reply. I've looked at the binaries on both the > SoGE website (up through 8c), as well as the files that used to be on > the BioTeam website but have since been moved or removed. The bin file > from the BioTeam site dated March

Re: [gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread Gerard Henry
On 11/18/11 03:31 PM, Reuti wrote: Hi, Am 18.11.2011 um 15:21 schrieb Gerard Henry: hello all, i got trouble to confgure a queue on SGE 6.2u5 (linux) I have two machines amd64, with this topology: SCCSCC so the total of cores is 8. and the PE is defined by: qconf -sp mpi_labo pe_name

Re: [gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread William Hay
On 18 November 2011 14:21, Gerard Henry wrote: > hello all, > > i got trouble to confgure a queue on SGE 6.2u5 (linux) > > I have two machines amd64, with this topology: SCCSCC so the total of > cores is 8. > > first, i defined a group: > # qconf -shgrp @qlong > group_name @qlong > hostlist charyb

Re: [gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread Reuti
Hi, Am 18.11.2011 um 15:21 schrieb Gerard Henry: > hello all, > > i got trouble to confgure a queue on SGE 6.2u5 (linux) > > I have two machines amd64, with this topology: SCCSCC so the total of cores > is 8. > > > and the PE is defined by: > qconf -sp mpi_labo > pe_namempi_labo

Re: [gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread Gerard Henry
sorry, a typo... yes long1 contains: pe_list make mpi_labo On 11/18/11 03:24 PM, Chris Dagdigian wrote: Check the value of "pe_list" in your queue configuration. The MPI PE you are trying to use is not listed in the pe_list parameter for the queue you are submitting to. The queue

Re: [gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread Chris Dagdigian
Check the value of "pe_list" in your queue configuration. The MPI PE you are trying to use is not listed in the pe_list parameter for the queue you are submitting to. The queue you show only has "make" as a supported PE. -Chris Gerard Henry wrote: hello all, i got trouble to confgure a

[gridengine users] cannot run in PE ... because it only offers 0 slots

2011-11-18 Thread Gerard Henry
hello all, i got trouble to confgure a queue on SGE 6.2u5 (linux) I have two machines amd64, with this topology: SCCSCC so the total of cores is 8. first, i defined a group: # qconf -shgrp @qlong group_name @qlong hostlist charybde scylla then a queue: # qconf -sq long1 qname

Re: [gridengine users] qrsh wrappers

2011-11-18 Thread William Hay
On 17 November 2011 10:27, Reuti wrote: > The wrappers are no longer used in case you use a recent version of Open MPI > (compiled --with-sge) or MPICH2. Both call directly `qrsh -inherit -V ...` if > they discover that they are running under SGE and entries in > start-/stop_proc_args can be s