[gridengine users] Indicating number of CPU used by a script

2012-08-08 Thread Lionel SPINELLI
Hello all, I have a question about how the qsub command can be use to indicate to the grid that the submitted script will use a specific number of CPU. The idea is that we are using genomic alignment tools that are software coded to manage multi-threading. The user decide on how many thread the

Re: [gridengine users] Indicating number of CPU used by a script

2012-08-08 Thread Reuti
Am 08.08.2012 um 11:27 schrieb Lionel SPINELLI: > Hello all, > > I have a question about how the qsub command can be use to indicate to the > grid that the submitted script will use a specific number of CPU. > The idea is that we are using genomic alignment tools that are software coded > to ma

Re: [gridengine users] Indicating number of CPU used by a script

2012-08-08 Thread Richard Ems
On 08/08/2012 11:27 AM, Lionel SPINELLI wrote: > Hello all, > > I have a question about how the qsub command can be use to indicate to the > grid that the submitted script will use a specific number of CPU. > The idea is that we are using genomic alignment tools that are software coded > to mana

[gridengine users] RE : Indicating number of CPU used by a script

2012-08-08 Thread Lionel SPINELLI
Hello all, thanks a lot to Reuti et Richard for their advises. I tried the PE using the suggested rule and everything works fine. That's great!!! Thanks again for your help. Lionel De : users-boun...@gridengine.org [users-boun...@gridengine.org] de la pa