Messages by Thread
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[spctools-discuss] MyriMatch and xinteract
Craig Mageean
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[spctools-discuss] SpectraST RAM issue when generating decoy library
Pieter-Jan Volders
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[spctools-discuss] mzML in TPP 4.8/SpectraST 5.0
Sten Heinze
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[spctools-discuss] Re: Peptide Prophet of MSGF+ results gives too many IDs?
Jesse
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[spctools-discuss] msconvert failed to convert Fusion and Lumos raw file to mgf file
cheng chang
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[spctools-discuss] Tutorial for Decoy peptide and protein validation
Vijay Kumar
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[spctools-discuss] Decoy database error in peptideprophat
Vijay Kumar
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[spctools-discuss] PeptideProphet - No of read spectra
Vijay Kumar
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[spctools-discuss] Pep3D image problem for mzXML format data
Vijay Kumar
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[spctools-discuss] Difference between mxML and mzXML format
Vijay Kumar
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[spctools-discuss] selection of Force the fitting of the mixture model
Vijay Kumar
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[spctools-discuss] Error in TPP v4.8.0 Makefile.incl on Debian
Sten Heinze
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[spctools-discuss] Libra quantification result interpretation
Vijay Kumar
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[spctools-discuss] plotspectrast not working
mcqueen . p
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[spctools-discuss] plotspectrast not working.
mcqueen . p
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[spctools-discuss] Comet database search error
Vijay Kumar
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[spctools-discuss] TANDEM database search problem
Vijay Kumar
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[spctools-discuss] TPP @ ASMS -- booth #805 + Monday Workshop
Luis Mendoza
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[spctools-discuss] Build SpectraST library from MaxQuant output
Constantin
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[spctools-discuss] Re: MassWolf error with MSe data
kimnowbester
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[spctools-discuss] OpenChrom/ChemClipse converters
Matthias Mailänder
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[spctools-discuss] qualscore mzXML parse error
Damon May
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[spctools-discuss] TPP 4.8.0 installation issues on Ubuntu 14.04
Craig Lawless
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[spctools-discuss] Tandem, MPI and output naming?
Joshua Dunham
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[spctools-discuss] label free quantitation of PTM sites
zeyu sun
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[spctools-discuss] using PTMProphet for more then 5 PTM?
zeyu sun
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[spctools-discuss] Bugs or problems in idconverter --pepXML (MS-GF+ mzid to pepXML)
Honglan Li
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[spctools-discuss] Problems with Makefile TPP v4.8.0
Constantin
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[spctools-discuss] raw file too big?
Emma Whittington
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[spctools-discuss] iProphet mistakenly parses FPKM values when using a NextProt peff database (TPP v. 5.0)
Jason Winget
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[spctools-discuss] condition.xml for TMT10plex
Shiliang Wang
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[spctools-discuss] Problem of model fitting (PeptideProphet) using MS-GF+ results
Honglan Li
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[spctools-discuss] Slow searches with MS-GF+ under Windows
Jason Winget
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[spctools-discuss] Comet search performance issue
bx2016uis
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[spctools-discuss] Protxml viewing error (not legacy) Server error 500 Bareword "endform" not allowed while "strict subs" in use
Scott Walmsley
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[spctools-discuss] History of search_engine attributes in the pepXML schema
Mal Ross
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[spctools-discuss] problem to open .pepXML file generated by TPP twa with xml viewer
Shiliang Wang
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[spctools-discuss] about X!tandem parameter
c qin
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[spctools-discuss] iProphet's NSP model
John Damask
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[spctools-discuss] Builds normally on CentOS, then fails at pwiz compilation step
John Poirier
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Re: [spctools-discuss] Using MSFileReader API to Extract Information from Thermo RAW files
Nathan Wamsley
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[spctools-discuss] Installation problems on Ubuntu 14.04
Vivek S
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[spctools-discuss] Xinteract Error - Problem in Retrieving XML data
mukundan pillai
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[spctools-discuss] Re: User-defined Modifications library construction and search using SpectraST
Sarah P.
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[spctools-discuss] Next TPP course in Seattle Feb 1-5
Eric Deutsch
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[spctools-discuss] Possible to run either msconvert or ReAdw on Linux using WINE?
David Zhao
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[spctools-discuss] bug report: empty lines added after manually changing XPRESS quants
Florian
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[spctools-discuss] PeptideProphet and MSGF+ Usage (Mixture Model Failed)
Ryan Lumpkin
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[spctools-discuss] "TPPish" taverna workflow with text mining/ Association analyses for peptides
Robert Winkler
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[spctools-discuss] Protein Quantitation on Unique Peptides Only
Florian
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[spctools-discuss] S-Nitrosylation
Gabriela Venturini
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RE: [spctools-discuss] SpectraST iRT normalization fail
Eric Deutsch
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[spctools-discuss] Re: Thermo RAW metadata with msfilereader
François ALLAIN
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[spctools-discuss] QualScore question
HFaz
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[spctools-discuss] Biological Sample Fingerprinting by Spectral Archives (-s_FIN): looking to acquire bootstrap support for all dot products rather than just default dot_product_unique_sqrt, but can't find proper command
seifst
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[spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Daniel Hyduke
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Re: [spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Jimmy Eng
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Re: [spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Daniel Hyduke
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Re: [spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Jimmy Eng
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Re: [spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Jimmy Eng
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Re: [spctools-discuss] readmzXML, tandem, and comet fail with files larger than 2 GB
Daniel Hyduke
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[spctools-discuss] I have a problem with TTP
Mohammad
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[spctools-discuss] having problem with Appache
Mohammad Goodarzi
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[spctools-discuss] Runtime error with ProteinProphet
HFaz
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[spctools-discuss] Sequest on TPP
HFaz
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Re: [spctools-discuss] Re: Proteome Discoverer's .msf to TPP input files (pepXML)
HFaz
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[spctools-discuss] Display of user defined modifications with spectraST Library Viewer not possible
Sarah P.
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[spctools-discuss] ProteinProphet limitations?
[email protected]
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[spctools-discuss] Can't compile TPP-4.8.0 on Fedora Linux
windenthusiast
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[spctools-discuss] Dimethylation labeling analysis using Coemt
azelanis
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[spctools-discuss] How to create spectral library from merged mzXML and pep.xml file created on PD1.4 by SpectraST?
waovoo
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[spctools-discuss] Moscot to pepXML can't see spectra
[email protected]
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[spctools-discuss] Xinteract non-zero exit code: 34304
ruhe
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[spctools-discuss] [solved] compiling TPP 4.8.0 on "exotic" 64bit linux (massypup64)
Robert