Hi,
I'm trying to generate a prot.xml file from 120 interact.ipro.pep.xml files. There seems to be some numerical limit on ProteinProphet as when I try to add all the ipro files the system immediately returns an error 256 code. If I choose a smaller number, say 10 ipro files, it goes to completion. Is there some max number of files that can be combined with ProteinProphet? Is there some way around this? It's an absolute requirement for me to make a prot.xml file from this data. I'm using TPP v 4.8.0 on aWin7 system, 64-bit, 64 GB RAM. If this is a known problem, I guess I could just pool more pep.xml files into each ipro file to reduce my overall number of files input into ProteinProphet. I've got some very large interact.ipro.pep.xml that are taking time to process into the prot.xml but that's to be expected. Thanks, Peter -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To unsubscribe from this group and stop receiving emails from it, send an email to spctools-discuss+unsubscr...@googlegroups.com. To post to this group, send email to spctools-discuss@googlegroups.com. Visit this group at http://groups.google.com/group/spctools-discuss. For more options, visit https://groups.google.com/d/optout.
