Hi, you can convert the raw data to mzML on any computer that runs docker. E.g. I use this strategy to convert Thermo files on a Linux System. The chambm container simulates a Windows system and contains the necessary vendor libraries. My command looks like this from the command line:
docker run -it -v /home/antix/Downloads/ThermoDDA:/data chambm/pwiz-skyline-i-agree-to-the-vendor-licenses wine msconvert /data/*.raw Best, Robert On Wednesday, 27 November 2024 at 12:00:18 UTC-6 David Shteynberg wrote: > Hello Arpita, > > Unfortunately, DLL files are Windows specific and do not function on Mac. > Whether or not Thermo is planning on providing RAW data access libraries > that function on Mac is a question for Thermo, but I suspect this is not a > top priority for most customers. I hope you are able to convert your data > to open formats on another computer and then continue using the TPP on your > Mac. > > Best, > -David > > On Tue, Nov 26, 2024 at 8:37 PM 'ARPITA TIWARI' via spctools-discuss < > [email protected]> wrote: > >> Sorry to disturb you but can I know why is it not possible on Mac? Why >> does Thermo libraries work in windows only? Is there any other solution ? >> Best regards >> Arpita >> >> On Wed, Nov 27, 2024 at 9:20 AM ARPITA TIWARI <[email protected]> >> wrote: >> >>> Dear David, >>> Okay will do that, thank you so much for your response. >>> Best regards >>> Arpita >>> >>> On Wed, Nov 27, 2024 at 9:01 AM 'David Shteynberg' via spctools-discuss < >>> [email protected]> wrote: >>> >>>> Hello Arpita, >>>> >>>> Thanks for your question. Conversion from RAW happens with the help of >>>> Thermo dll libraries which only function on windows. To process >>>> proteomics >>>> data with TPP on a Mac you have to start with mzML or mzXML data and >>>> convert the data on another computer. >>>> >>>> Best, >>>> David >>>> >>>> >>>> On Tue, Nov 26, 2024, 7:27 PM 'ARPITA TIWARI' via spctools-discuss < >>>> [email protected]> wrote: >>>> >>>>> Hello everyone, >>>>> I have attached the following error below I have installed the TPP in >>>>> M1 MAC os with the help of source link. Now I am trying to convert .raw >>>>> file into mxML. Somehow, it isn"t happening. >>>>> I will be grateful if anyone an solve this problem. >>>>> Thank you >>>>> Best regards >>>>> Arpita >>>>> [image: Screenshot 2024-11-27 at 7.43.09 AM.png][image: Screenshot >>>>> 2024-11-27 at 8.29.55 AM.png] >>>>> >>>>> >>>>> [image: https://www.linkedin.com/in/gujarat-biotechnology-university] >>>>> <https://www.linkedin.com/in/gujarat-biotechnology-university> [image: >>>>> https://www.facebook.com/Gujarat-Biotechnology-University-101550609248432] >>>>> >>>>> <https://www.facebook.com/Gujarat-Biotechnology-University-101550609248432>[image: >>>>> >>>>> https://goo.gl/maps/xEm5CnhHXv21cehZ7] >>>>> <https://g.page/r/CbFLDpwlBbq7EBM/review> [image: >>>>> https://gbu.edu.in/images/footer/yt11.png] >>>>> <https://www.youtube.com/@gujaratbiotechnologyuniver1740> [image: >>>>> https://www.instagram.com/gujaratbiotechnologyuniversity/] >>>>> <https://www.instagram.com/gujaratbiotechnologyuniversity/>[image: >>>>> https://twitter.com/GujBiotechUni] <https://twitter.com/GujBiotechUni> >>>>> This message contains confidential information and is intended only >>>>> for the individual named. 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