Dear all I am making a workflow with a blast and a multiple sequence alignment service. These are connected up using a couple of services. 'Merge_string_list_to_string' is used to merge the hitID output from the blast search into a string. This string is then inputted into 'fetchBatch' to get the sequences to be inputted into the multiple sequence alignment service. This is all as done in a workflow on myExperiment called 'Protein_search_fetch_align_tree'.
Just like in this myE workflow... For 'merge_string_list_to_string' I set: separator to ',' For 'fetchBatch' I set: format to 'fasta' style to 'raw' However, in my workflow the sequences (the output of fetchBatch') are in a list so when you save them there is a sequence to a file, whereas in the myE workflow the sequences are all in the same file. Does anyone know what I am doing wrong? I think that it is affecting the workflow downstream. Thank you Emily Halford ------------------------------------------------------------------------------ Let Crystal Reports handle the reporting - Free Crystal Reports 2008 30-Day trial. Simplify your report design, integration and deployment - and focus on what you do best, core application coding. Discover what's new with Crystal Reports now. http://p.sf.net/sfu/bobj-july _______________________________________________ taverna-users mailing list [email protected] [email protected] Web site: http://www.taverna.org.uk Mailing lists: http://www.taverna.org.uk/taverna-mailing-lists/
